RNA–Protein interactions for RNA: ENST00000409556.5

KDM3A-203, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene KDM3A, Length 4,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-203ENST00000409556 ASB16-AS1Q495Z4 193 aa8.69□□□□□ -1.02
KDM3A-203ENST00000409556 PDZD2O15018 2839 aa8.67□□□□□ -1.02
KDM3A-203ENST00000409556 KRTAP13-2Q52LG2 175 aa8.67□□□□□ -1.02
KDM3A-203ENST00000409556 CRIPTQ9P021 101 aa8.64□□□□□ -1.03
KDM3A-203ENST00000409556 TENM1Q9UKZ4 2725 aa8.63□□□□□ -1.03
KDM3A-203ENST00000409556 A0A1B0GU33 70 aa8.63□□□□□ -1.03
KDM3A-203ENST00000409556 TENM3Q9P273 2699 aa8.61□□□□□ -1.03
KDM3A-203ENST00000409556 KRTAP29-1A8MX34 341 aaPredicted RBP8.6□□□□□ -1.03
KDM3A-203ENST00000409556 MUC3AQ02505 3323 aa8.6□□□□□ -1.03
KDM3A-203ENST00000409556 Q5XG85 94 aa8.59□□□□□ -1.03
KDM3A-203ENST00000409556 CAMK2N1Q7Z7J9 78 aa8.58□□□□□ -1.04
KDM3A-203ENST00000409556 TENM2Q9NT68 2774 aa8.58□□□□□ -1.04
KDM3A-203ENST00000409556 CELSR1Q9NYQ6 3014 aa8.56□□□□□ -1.04
KDM3A-203ENST00000409556 NOTCH2NLQ7Z3S9 236 aa8.56□□□□□ -1.04
KDM3A-203ENST00000409556 CDC42SE1Q9NRR8 79 aa8.56□□□□□ -1.04
KDM3A-203ENST00000409556 Q1T7F1 81 aa8.55□□□□□ -1.04
KDM3A-203ENST00000409556 LAMA5O15230 3695 aa8.54□□□□□ -1.04
KDM3A-203ENST00000409556 OTOGQ6ZRI0 2925 aa8.53□□□□□ -1.04
KDM3A-203ENST00000409556 R4GN34 69 aa8.51□□□□□ -1.05
KDM3A-203ENST00000409556 DMAC1Q96GE9 116 aa8.5□□□□□ -1.05
KDM3A-203ENST00000409556 LINC01558Q9Y6Z2 57 aa8.5□□□□□ -1.05
KDM3A-203ENST00000409556 Q75L30 129 aa8.48□□□□□ -1.05
KDM3A-203ENST00000409556 PKD1L1Q8TDX9 2849 aa8.47□□□□□ -1.05
KDM3A-203ENST00000409556 CYSTM1Q9H1C7 97 aa8.47□□□□□ -1.05
KDM3A-203ENST00000409556 WDFY3Q8IZQ1 3526 aa8.43□□□□□ -1.06
KDM3A-203ENST00000409556 RPL37P61927 97 aaKnown RBP8.43□□□□□ -1.06
KDM3A-203ENST00000409556 DMDP11532 3685 aa8.41□□□□□ -1.06
KDM3A-203ENST00000409556 KRTAP1-4P0C5Y4 121 aa8.39□□□□□ -1.07
KDM3A-203ENST00000409556 ASPMQ8IZT6 3477 aa8.37□□□□□ -1.07
KDM3A-203ENST00000409556 H1FX-AS1Q4G0G2 97 aa8.37□□□□□ -1.07
KDM3A-203ENST00000409556 NBPF19A0A087WUL8 3843 aa8.36□□□□□ -1.07
KDM3A-203ENST00000409556 M0QZ58 72 aa8.35□□□□□ -1.07
KDM3A-203ENST00000409556 FBN1P35555 2871 aaKnown RBP8.33□□□□□ -1.08
KDM3A-203ENST00000409556 ADM2Q7Z4H4 148 aa8.3□□□□□ -1.08
KDM3A-203ENST00000409556 LCA10Q71F78 164 aa8.29□□□□□ -1.08
KDM3A-203ENST00000409556 TGP01266 2768 aa8.29□□□□□ -1.08
KDM3A-203ENST00000409556 A8MUU9 505 aa8.28□□□□□ -1.08
KDM3A-203ENST00000409556 ZFHX3Q15911 3703 aa8.27□□□□□ -1.09
KDM3A-203ENST00000409556 KTN1-AS1Q86SY8 53 aa8.27□□□□□ -1.09
KDM3A-203ENST00000409556 VWFP04275 2813 aa8.27□□□□□ -1.09
KDM3A-203ENST00000409556 C20orf166-AS1Q96NR2 134 aa8.26□□□□□ -1.09
KDM3A-203ENST00000409556 A0A1B0GVY2 172 aa8.25□□□□□ -1.09
KDM3A-203ENST00000409556 Q5VV11 94 aa8.25□□□□□ -1.09
KDM3A-203ENST00000409556 ZFHX4Q86UP3 3567 aa8.23□□□□□ -1.09
KDM3A-203ENST00000409556 PLAC4Q8WY50 150 aa8.2□□□□□ -1.1
KDM3A-203ENST00000409556 SMG1Q96Q15 3661 aaKnown RBP8.18□□□□□ -1.1
KDM3A-203ENST00000409556 XP32Q5T750 250 aa8.18□□□□□ -1.1
KDM3A-203ENST00000409556 TPRXLQ17RH7 258 aa8.14□□□□□ -1.11
KDM3A-203ENST00000409556 SPATA8Q6RVD6 105 aa8.12□□□□□ -1.11
KDM3A-203ENST00000409556 ANK3Q12955 4377 aaKnown RBP8.06□□□□□ -1.12
KDM3A-203ENST00000409556 KRTAP10-8P60410 259 aa8.04□□□□□ -1.12
KDM3A-203ENST00000409556 ROMO1P60602 79 aa8.01□□□□□ -1.13
KDM3A-203ENST00000409556 KRTAP13-3Q3SY46 172 aa8□□□□□ -1.13
KDM3A-203ENST00000409556 CSMD1Q96PZ7 3565 aa8□□□□□ -1.13
KDM3A-203ENST00000409556 LUZP6Q538Z0 58 aa8□□□□□ -1.13
KDM3A-203ENST00000409556 CSMD2Q7Z408 3487 aa7.97□□□□□ -1.13
KDM3A-203ENST00000409556 KRTAP16-1A8MUX0 517 aa7.94□□□□□ -1.14
KDM3A-203ENST00000409556 PRAC1Q96KF2 57 aa7.92□□□□□ -1.14
KDM3A-203ENST00000409556 SPENQ96T58 3664 aaKnown RBP7.91□□□□□ -1.14
KDM3A-203ENST00000409556 SRRM2Q9UQ35 2752 aaKnown RBP7.88□□□□□ -1.15
KDM3A-203ENST00000409556 FBN3Q75N90 2809 aa7.88□□□□□ -1.15
KDM3A-203ENST00000409556 A8MU10 97 aa7.88□□□□□ -1.15
KDM3A-203ENST00000409556 TRRAPQ9Y4A5 3859 aa7.81□□□□□ -1.16
KDM3A-203ENST00000409556 BSNQ9UPA5 3926 aa7.8□□□□□ -1.16
KDM3A-203ENST00000409556 SVEP1Q4LDE5 3571 aa7.78□□□□□ -1.16
KDM3A-203ENST00000409556 H3BS24 57 aa7.76□□□□□ -1.17
KDM3A-203ENST00000409556 KRTAP10-10P60014 251 aa7.71□□□□□ -1.18
KDM3A-203ENST00000409556 MEGF8Q7Z7M0 2845 aa7.69□□□□□ -1.18
KDM3A-203ENST00000409556 TNP1P09430 55 aa7.67□□□□□ -1.18
KDM3A-203ENST00000409556 COL7A1Q02388 2944 aa7.62□□□□□ -1.19
KDM3A-203ENST00000409556 CUBNO60494 3623 aa7.56□□□□□ -1.2
KDM3A-203ENST00000409556 A6NN06 94 aa7.54□□□□□ -1.2
KDM3A-203ENST00000409556 MT1HL1P0DM35 61 aa7.51□□□□□ -1.21
KDM3A-203ENST00000409556 P0C880 135 aa7.5□□□□□ -1.21
KDM3A-203ENST00000409556 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
KDM3A-203ENST00000409556 HUWE1Q7Z6Z7 4374 aaKnown RBP7.47□□□□□ -1.21
KDM3A-203ENST00000409556 PRO2289Q9P1D8 64 aa7.46□□□□□ -1.22
KDM3A-203ENST00000409556 H0YAA0 97 aa7.45□□□□□ -1.22
KDM3A-203ENST00000409556 KRTAP10-4P60372 401 aaPredicted RBP7.4□□□□□ -1.22
KDM3A-203ENST00000409556 KRTAP4-5Q9BYR2 181 aa7.39□□□□□ -1.23
KDM3A-203ENST00000409556 PP632Q6XCG6 107 aa7.37□□□□□ -1.23
KDM3A-203ENST00000409556 A0A0A0MQY5 61 aa7.35□□□□□ -1.23
KDM3A-203ENST00000409556 VPS13CQ709C8 3753 aa7.3□□□□□ -1.24
KDM3A-203ENST00000409556 AKAP9Q99996 3911 aa7.29□□□□□ -1.24
KDM3A-203ENST00000409556 ZNF469Q96JG9 3925 aaPredicted RBP7.28□□□□□ -1.24
KDM3A-203ENST00000409556 KRTAP3-1Q9BYR8 98 aa7.27□□□□□ -1.24
KDM3A-203ENST00000409556 ALMS1Q8TCU4 4167 aa7.25□□□□□ -1.25
KDM3A-203ENST00000409556 DNAH9Q9NYC9 4486 aa7.24□□□□□ -1.25
KDM3A-203ENST00000409556 DNHD1Q96M86 4753 aa7.22□□□□□ -1.25
KDM3A-203ENST00000409556 C10orf95Q9H7T3 257 aa7.21□□□□□ -1.25
KDM3A-203ENST00000409556 KRTAP12-2P59991 146 aa7.08□□□□□ -1.28
KDM3A-203ENST00000409556 DNAH5Q8TE73 4624 aa7.06□□□□□ -1.28
KDM3A-203ENST00000409556 KRTAP12-1P59990 96 aa7.02□□□□□ -1.29
KDM3A-203ENST00000409556 PLECQ15149 4684 aaKnown RBP6.98□□□□□ -1.29
KDM3A-203ENST00000409556 KRTAP10-6P60371 365 aaPredicted RBP6.97□□□□□ -1.29
KDM3A-203ENST00000409556 KRTAP13-4Q3LI77 160 aa6.96□□□□□ -1.29
KDM3A-203ENST00000409556 NDUFAF8A1L188 74 aa6.96□□□□□ -1.3
KDM3A-203ENST00000409556 DNAH11Q96DT5 4516 aa6.94□□□□□ -1.3
KDM3A-203ENST00000409556 DNAH1Q9P2D7 4330 aa6.9□□□□□ -1.3
KDM3A-203ENST00000409556 KRTAP3-3Q9BYR6 98 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms