RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 KRTAP7-1Q8IUC3 87 aa9.75□□□□□ -0.85
PCDHA13-202ENST00000409494 CELSR2Q9HCU4 2923 aa9.72□□□□□ -0.85
PCDHA13-202ENST00000409494 DMAC1Q96GE9 116 aa9.72□□□□□ -0.85
PCDHA13-202ENST00000409494 KRTAP11-1Q8IUC1 163 aa9.69□□□□□ -0.86
PCDHA13-202ENST00000409494 DMBT1Q9UGM3 2413 aaPredicted RBP9.68□□□□□ -0.86
PCDHA13-202ENST00000409494 A0A0D9SG42 100 aa9.68□□□□□ -0.86
PCDHA13-202ENST00000409494 CAMK2N1Q7Z7J9 78 aa9.66□□□□□ -0.86
PCDHA13-202ENST00000409494 NF1P21359 2839 aa9.62□□□□□ -0.87
PCDHA13-202ENST00000409494 FBN2P35556 2912 aa9.61□□□□□ -0.87
PCDHA13-202ENST00000409494 KRTAP13-2Q52LG2 175 aa9.6□□□□□ -0.87
PCDHA13-202ENST00000409494 PRAC1Q96KF2 57 aa9.59□□□□□ -0.87
PCDHA13-202ENST00000409494 DCHS2Q6V1P9 2916 aa9.59□□□□□ -0.87
PCDHA13-202ENST00000409494 NOTCH2NLQ7Z3S9 236 aa9.58□□□□□ -0.88
PCDHA13-202ENST00000409494 R4GN34 69 aa9.58□□□□□ -0.88
PCDHA13-202ENST00000409494 FLG2Q5D862 2391 aaPredicted RBP9.57□□□□□ -0.88
PCDHA13-202ENST00000409494 CRYBG3Q68DQ2 2970 aa9.49□□□□□ -0.89
PCDHA13-202ENST00000409494 MXRA5Q9NR99 2828 aa9.47□□□□□ -0.89
PCDHA13-202ENST00000409494 RPL37P61927 97 aaKnown RBP9.47□□□□□ -0.89
PCDHA13-202ENST00000409494 H1FX-AS1Q4G0G2 97 aa9.46□□□□□ -0.89
PCDHA13-202ENST00000409494 WDFY3Q8IZQ1 3526 aa9.42□□□□□ -0.9
PCDHA13-202ENST00000409494 SPATA8Q6RVD6 105 aa9.36□□□□□ -0.91
PCDHA13-202ENST00000409494 A8MUU9 505 aa9.36□□□□□ -0.91
PCDHA13-202ENST00000409494 M0QZ58 72 aa9.34□□□□□ -0.91
PCDHA13-202ENST00000409494 RELNP78509 3460 aa9.34□□□□□ -0.91
PCDHA13-202ENST00000409494 C20orf166-AS1Q96NR2 134 aa9.33□□□□□ -0.92
PCDHA13-202ENST00000409494 A6NN06 94 aa9.32□□□□□ -0.92
PCDHA13-202ENST00000409494 KRTAP1-4P0C5Y4 121 aa9.31□□□□□ -0.92
PCDHA13-202ENST00000409494 DCHS1Q96JQ0 3298 aa9.29□□□□□ -0.92
PCDHA13-202ENST00000409494 A8MU10 97 aa9.28□□□□□ -0.92
PCDHA13-202ENST00000409494 ADM2Q7Z4H4 148 aa9.27□□□□□ -0.93
PCDHA13-202ENST00000409494 PLAC4Q8WY50 150 aa9.27□□□□□ -0.93
PCDHA13-202ENST00000409494 LUZP6Q538Z0 58 aa9.25□□□□□ -0.93
PCDHA13-202ENST00000409494 ZFHX4Q86UP3 3567 aa9.22□□□□□ -0.93
PCDHA13-202ENST00000409494 ROMO1P60602 79 aa9.21□□□□□ -0.93
PCDHA13-202ENST00000409494 ASPMQ8IZT6 3477 aa9.19□□□□□ -0.94
PCDHA13-202ENST00000409494 LAMA5O15230 3695 aa9.18□□□□□ -0.94
PCDHA13-202ENST00000409494 TPRXLQ17RH7 258 aa9.16□□□□□ -0.94
PCDHA13-202ENST00000409494 TENM3Q9P273 2699 aa9.15□□□□□ -0.94
PCDHA13-202ENST00000409494 CELSR1Q9NYQ6 3014 aa9.15□□□□□ -0.95
PCDHA13-202ENST00000409494 PDZD2O15018 2839 aa9.13□□□□□ -0.95
PCDHA13-202ENST00000409494 H3BS24 57 aa9.11□□□□□ -0.95
PCDHA13-202ENST00000409494 A0A1B0GVY2 172 aa9.1□□□□□ -0.95
PCDHA13-202ENST00000409494 TENM1Q9UKZ4 2725 aa9.09□□□□□ -0.95
PCDHA13-202ENST00000409494 XP32Q5T750 250 aa9.09□□□□□ -0.95
PCDHA13-202ENST00000409494 DMDP11532 3685 aa9.08□□□□□ -0.96
PCDHA13-202ENST00000409494 MUC3AQ02505 3323 aa9.08□□□□□ -0.96
PCDHA13-202ENST00000409494 CSMD1Q96PZ7 3565 aa9.03□□□□□ -0.96
PCDHA13-202ENST00000409494 SMG1Q96Q15 3661 aaKnown RBP9.01□□□□□ -0.97
PCDHA13-202ENST00000409494 TENM2Q9NT68 2774 aa9.01□□□□□ -0.97
PCDHA13-202ENST00000409494 KRTAP25-1Q3LHN0 102 aa8.98□□□□□ -0.97
PCDHA13-202ENST00000409494 KRTAP10-8P60410 259 aa8.97□□□□□ -0.97
PCDHA13-202ENST00000409494 KRTAP13-3Q3SY46 172 aa8.92□□□□□ -0.98
PCDHA13-202ENST00000409494 KRTAP16-1A8MUX0 517 aa8.89□□□□□ -0.99
PCDHA13-202ENST00000409494 VWFP04275 2813 aa8.88□□□□□ -0.99
PCDHA13-202ENST00000409494 OTOGQ6ZRI0 2925 aa8.84□□□□□ -0.99
PCDHA13-202ENST00000409494 TGP01266 2768 aa8.78□□□□□ -1
PCDHA13-202ENST00000409494 SVEP1Q4LDE5 3571 aa8.76□□□□□ -1.01
PCDHA13-202ENST00000409494 FBN1P35555 2871 aaKnown RBP8.74□□□□□ -1.01
PCDHA13-202ENST00000409494 TNP1P09430 55 aa8.73□□□□□ -1.01
PCDHA13-202ENST00000409494 A0A0A0MQY5 61 aa8.7□□□□□ -1.02
PCDHA13-202ENST00000409494 H0YAA0 97 aa8.69□□□□□ -1.02
PCDHA13-202ENST00000409494 PKD1L1Q8TDX9 2849 aa8.68□□□□□ -1.02
PCDHA13-202ENST00000409494 NBPF19A0A087WUL8 3843 aa8.59□□□□□ -1.03
PCDHA13-202ENST00000409494 SPENQ96T58 3664 aaKnown RBP8.58□□□□□ -1.04
PCDHA13-202ENST00000409494 PP632Q6XCG6 107 aa8.58□□□□□ -1.04
PCDHA13-202ENST00000409494 CUBNO60494 3623 aa8.54□□□□□ -1.04
PCDHA13-202ENST00000409494 KRTAP10-10P60014 251 aa8.52□□□□□ -1.04
PCDHA13-202ENST00000409494 NDUFAF8A1L188 74 aa8.51□□□□□ -1.05
PCDHA13-202ENST00000409494 PRO2289Q9P1D8 64 aa8.49□□□□□ -1.05
PCDHA13-202ENST00000409494 BSNQ9UPA5 3926 aa8.47□□□□□ -1.05
PCDHA13-202ENST00000409494 ANK3Q12955 4377 aaKnown RBP8.47□□□□□ -1.05
PCDHA13-202ENST00000409494 CSMD2Q7Z408 3487 aa8.44□□□□□ -1.06
PCDHA13-202ENST00000409494 C10orf95Q9H7T3 257 aa8.44□□□□□ -1.06
PCDHA13-202ENST00000409494 ZFHX3Q15911 3703 aa8.38□□□□□ -1.07
PCDHA13-202ENST00000409494 P0C880 135 aa8.37□□□□□ -1.07
PCDHA13-202ENST00000409494 FBN3Q75N90 2809 aa8.36□□□□□ -1.07
PCDHA13-202ENST00000409494 TRRAPQ9Y4A5 3859 aa8.31□□□□□ -1.08
PCDHA13-202ENST00000409494 SRRM2Q9UQ35 2752 aaKnown RBP8.3□□□□□ -1.08
PCDHA13-202ENST00000409494 MT1HL1P0DM35 61 aa8.25□□□□□ -1.09
PCDHA13-202ENST00000409494 MEGF8Q7Z7M0 2845 aa8.22□□□□□ -1.09
PCDHA13-202ENST00000409494 KRTAP3-1Q9BYR8 98 aa8.22□□□□□ -1.09
PCDHA13-202ENST00000409494 KRTAP10-4P60372 401 aaPredicted RBP8.14□□□□□ -1.11
PCDHA13-202ENST00000409494 VPS13CQ709C8 3753 aa8.09□□□□□ -1.11
PCDHA13-202ENST00000409494 KRTAP12-2P59991 146 aa8.08□□□□□ -1.12
PCDHA13-202ENST00000409494 COL7A1Q02388 2944 aa8.02□□□□□ -1.13
PCDHA13-202ENST00000409494 KRTAP12-1P59990 96 aa8□□□□□ -1.13
PCDHA13-202ENST00000409494 KRTAP10-6P60371 365 aaPredicted RBP7.96□□□□□ -1.13
PCDHA13-202ENST00000409494 KRTAP13-4Q3LI77 160 aa7.93□□□□□ -1.14
PCDHA13-202ENST00000409494 HUWE1Q7Z6Z7 4374 aaKnown RBP7.91□□□□□ -1.14
PCDHA13-202ENST00000409494 KRTAP4-5Q9BYR2 181 aa7.84□□□□□ -1.16
PCDHA13-202ENST00000409494 ZNF469Q96JG9 3925 aaPredicted RBP7.81□□□□□ -1.16
PCDHA13-202ENST00000409494 ALMS1Q8TCU4 4167 aa7.78□□□□□ -1.16
PCDHA13-202ENST00000409494 KRTAP3-3Q9BYR6 98 aa7.74□□□□□ -1.17
PCDHA13-202ENST00000409494 KRTAP3-2Q9BYR7 98 aa7.74□□□□□ -1.17
PCDHA13-202ENST00000409494 AKAP9Q99996 3911 aa7.72□□□□□ -1.17
PCDHA13-202ENST00000409494 CSMD3Q7Z407 3707 aa7.62□□□□□ -1.19
PCDHA13-202ENST00000409494 DNAH9Q9NYC9 4486 aa7.57□□□□□ -1.2
PCDHA13-202ENST00000409494 KRTAP15-1Q3LI76 137 aa7.48□□□□□ -1.21
PCDHA13-202ENST00000409494 DNAH1Q9P2D7 4330 aa7.44□□□□□ -1.22
PCDHA13-202ENST00000409494 DNAH10Q8IVF4 4471 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms