RNA–Protein interactions for RNA: ENST00000409114.7

PBRM1-206, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-206ENST00000409114 KRTAP4-16G5E9R7 235 aaPredicted RBP4.8□□□□□ -1.64
PBRM1-206ENST00000409114 KRTAP16-1A8MUX0 517 aa4.79□□□□□ -1.64
PBRM1-206ENST00000409114 Q5W150 140 aa4.79□□□□□ -1.64
PBRM1-206ENST00000409114 BSNQ9UPA5 3926 aa4.79□□□□□ -1.64
PBRM1-206ENST00000409114 VPS13AQ96RL7 3174 aa4.78□□□□□ -1.64
PBRM1-206ENST00000409114 LRBAP50851 2863 aa4.78□□□□□ -1.64
PBRM1-206ENST00000409114 SPATA8Q6RVD6 105 aa4.78□□□□□ -1.65
PBRM1-206ENST00000409114 RELNP78509 3460 aa4.77□□□□□ -1.65
PBRM1-206ENST00000409114 A8MU10 97 aa4.77□□□□□ -1.65
PBRM1-206ENST00000409114 KALRNO60229 2985 aa4.77□□□□□ -1.65
PBRM1-206ENST00000409114 KRTAP29-1A8MX34 341 aaPredicted RBP4.75□□□□□ -1.65
PBRM1-206ENST00000409114 RPL37P61927 97 aaKnown RBP4.75□□□□□ -1.65
PBRM1-206ENST00000409114 COL6A3P12111 3177 aa4.75□□□□□ -1.65
PBRM1-206ENST00000409114 H1FX-AS1Q4G0G2 97 aa4.74□□□□□ -1.65
PBRM1-206ENST00000409114 ASPMQ8IZT6 3477 aa4.73□□□□□ -1.65
PBRM1-206ENST00000409114 ZZEF1O43149 2961 aa4.73□□□□□ -1.65
PBRM1-206ENST00000409114 LAMA1P25391 3075 aa4.73□□□□□ -1.65
PBRM1-206ENST00000409114 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
PBRM1-206ENST00000409114 ROMO1P60602 79 aa4.73□□□□□ -1.65
PBRM1-206ENST00000409114 KRTAP13-2Q52LG2 175 aa4.72□□□□□ -1.65
PBRM1-206ENST00000409114 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.65
PBRM1-206ENST00000409114 KRTAP13-1Q8IUC0 172 aa4.71□□□□□ -1.66
PBRM1-206ENST00000409114 C20orf166-AS1Q96NR2 134 aa4.7□□□□□ -1.66
PBRM1-206ENST00000409114 M0QZ58 72 aa4.7□□□□□ -1.66
PBRM1-206ENST00000409114 SMG1Q96Q15 3661 aaKnown RBP4.69□□□□□ -1.66
PBRM1-206ENST00000409114 KRTAP11-1Q8IUC1 163 aa4.67□□□□□ -1.66
PBRM1-206ENST00000409114 TENM3Q9P273 2699 aa4.67□□□□□ -1.66
PBRM1-206ENST00000409114 TPRXLQ17RH7 258 aa4.67□□□□□ -1.66
PBRM1-206ENST00000409114 MXRA5Q9NR99 2828 aa4.67□□□□□ -1.66
PBRM1-206ENST00000409114 NF1P21359 2839 aa4.67□□□□□ -1.66
PBRM1-206ENST00000409114 NBPF19A0A087WUL8 3843 aa4.66□□□□□ -1.66
PBRM1-206ENST00000409114 TENM2Q9NT68 2774 aa4.66□□□□□ -1.66
PBRM1-206ENST00000409114 CELSR2Q9HCU4 2923 aa4.65□□□□□ -1.66
PBRM1-206ENST00000409114 TENM1Q9UKZ4 2725 aa4.65□□□□□ -1.67
PBRM1-206ENST00000409114 DCHS2Q6V1P9 2916 aa4.65□□□□□ -1.67
PBRM1-206ENST00000409114 A0A1B0GVY2 172 aa4.64□□□□□ -1.67
PBRM1-206ENST00000409114 DMXL1Q9Y485 3027 aa4.64□□□□□ -1.67
PBRM1-206ENST00000409114 KRTAP7-1Q8IUC3 87 aa4.63□□□□□ -1.67
PBRM1-206ENST00000409114 CELSR3Q9NYQ7 3312 aa4.63□□□□□ -1.67
PBRM1-206ENST00000409114 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
PBRM1-206ENST00000409114 ZANQ9Y493 2812 aa4.62□□□□□ -1.67
PBRM1-206ENST00000409114 BOD1L1Q8NFC6 3051 aa4.62□□□□□ -1.67
PBRM1-206ENST00000409114 ADGRG4Q8IZF6 3080 aa4.62□□□□□ -1.67
PBRM1-206ENST00000409114 VPS13CQ709C8 3753 aa4.61□□□□□ -1.67
PBRM1-206ENST00000409114 CFAP47Q6ZTR5 3102 aa4.59□□□□□ -1.67
PBRM1-206ENST00000409114 FREM2Q5SZK8 3169 aa4.58□□□□□ -1.68
PBRM1-206ENST00000409114 A8MUU9 505 aa4.58□□□□□ -1.68
PBRM1-206ENST00000409114 KRTAP1-4P0C5Y4 121 aa4.57□□□□□ -1.68
PBRM1-206ENST00000409114 XP32Q5T750 250 aa4.56□□□□□ -1.68
PBRM1-206ENST00000409114 NOTCH2NLQ7Z3S9 236 aa4.55□□□□□ -1.68
PBRM1-206ENST00000409114 AKAP9Q99996 3911 aa4.51□□□□□ -1.69
PBRM1-206ENST00000409114 KRTAP10-8P60410 259 aa4.51□□□□□ -1.69
PBRM1-206ENST00000409114 LOC400499M0QZD8 3231 aa4.5□□□□□ -1.69
PBRM1-206ENST00000409114 PKD1L1Q8TDX9 2849 aa4.49□□□□□ -1.69
PBRM1-206ENST00000409114 PDZD2O15018 2839 aa4.49□□□□□ -1.69
PBRM1-206ENST00000409114 LAMA5O15230 3695 aa4.48□□□□□ -1.69
PBRM1-206ENST00000409114 HRNRQ86YZ3 2850 aaPredicted RBP4.48□□□□□ -1.69
PBRM1-206ENST00000409114 KRTAP13-3Q3SY46 172 aa4.47□□□□□ -1.69
PBRM1-206ENST00000409114 KRTAP10-10P60014 251 aa4.45□□□□□ -1.7
PBRM1-206ENST00000409114 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
PBRM1-206ENST00000409114 OTOGQ6ZRI0 2925 aa4.43□□□□□ -1.7
PBRM1-206ENST00000409114 DCHS1Q96JQ0 3298 aa4.43□□□□□ -1.7
PBRM1-206ENST00000409114 CSMD1Q96PZ7 3565 aa4.41□□□□□ -1.7
PBRM1-206ENST00000409114 FBN2P35556 2912 aa4.4□□□□□ -1.71
PBRM1-206ENST00000409114 TNP1P09430 55 aa4.37□□□□□ -1.71
PBRM1-206ENST00000409114 CELSR1Q9NYQ6 3014 aa4.37□□□□□ -1.71
PBRM1-206ENST00000409114 CUBNO60494 3623 aa4.36□□□□□ -1.71
PBRM1-206ENST00000409114 FBN3Q75N90 2809 aa4.35□□□□□ -1.71
PBRM1-206ENST00000409114 CSMD2Q7Z408 3487 aa4.34□□□□□ -1.72
PBRM1-206ENST00000409114 TGP01266 2768 aa4.34□□□□□ -1.72
PBRM1-206ENST00000409114 VWFP04275 2813 aa4.33□□□□□ -1.72
PBRM1-206ENST00000409114 ZNF469Q96JG9 3925 aaPredicted RBP4.31□□□□□ -1.72
PBRM1-206ENST00000409114 H0YAA0 97 aa4.3□□□□□ -1.72
PBRM1-206ENST00000409114 SVEP1Q4LDE5 3571 aa4.29□□□□□ -1.72
PBRM1-206ENST00000409114 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
PBRM1-206ENST00000409114 P0C880 135 aa4.26□□□□□ -1.73
PBRM1-206ENST00000409114 FBN1P35555 2871 aaKnown RBP4.22□□□□□ -1.73
PBRM1-206ENST00000409114 CSMD3Q7Z407 3707 aa4.21□□□□□ -1.74
PBRM1-206ENST00000409114 SRRM2Q9UQ35 2752 aaKnown RBP4.19□□□□□ -1.74
PBRM1-206ENST00000409114 PP632Q6XCG6 107 aa4.19□□□□□ -1.74
PBRM1-206ENST00000409114 MT1HL1P0DM35 61 aa4.15□□□□□ -1.75
PBRM1-206ENST00000409114 ANK3Q12955 4377 aaKnown RBP4.14□□□□□ -1.75
PBRM1-206ENST00000409114 KRTAP4-5Q9BYR2 181 aa4.07□□□□□ -1.76
PBRM1-206ENST00000409114 LYSTQ99698 3801 aa4.04□□□□□ -1.76
PBRM1-206ENST00000409114 ANK2Q01484 3957 aa4.03□□□□□ -1.76
PBRM1-206ENST00000409114 TRRAPQ9Y4A5 3859 aa4.01□□□□□ -1.77
PBRM1-206ENST00000409114 CMYA5Q8N3K9 4069 aa4.01□□□□□ -1.77
PBRM1-206ENST00000409114 KRTAP10-4P60372 401 aaPredicted RBP3.99□□□□□ -1.77
PBRM1-206ENST00000409114 COL7A1Q02388 2944 aa3.97□□□□□ -1.77
PBRM1-206ENST00000409114 MEGF8Q7Z7M0 2845 aa3.97□□□□□ -1.77
PBRM1-206ENST00000409114 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
PBRM1-206ENST00000409114 KRTAP12-2P59991 146 aa3.94□□□□□ -1.78
PBRM1-206ENST00000409114 ALMS1Q8TCU4 4167 aa3.91□□□□□ -1.78
PBRM1-206ENST00000409114 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
PBRM1-206ENST00000409114 DNAH3Q8TD57 4116 aa3.88□□□□□ -1.79
PBRM1-206ENST00000409114 DNAH1Q9P2D7 4330 aa3.86□□□□□ -1.79
PBRM1-206ENST00000409114 KRTAP13-4Q3LI77 160 aa3.83□□□□□ -1.8
PBRM1-206ENST00000409114 KRTAP3-1Q9BYR8 98 aa3.82□□□□□ -1.8
PBRM1-206ENST00000409114 INE1O15225 51 aa3.79□□□□□ -1.8
PBRM1-206ENST00000409114 KRTAP10-6P60371 365 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms