RNA–Protein interactions for RNA: ENST00000409114.7

PBRM1-206, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-206ENST00000409114 DCAF8L2P0C7V8 631 aa15.18■□□□□ 0.02
PBRM1-206ENST00000409114 NISCHQ9Y2I1 1504 aa14.83□□□□□ -0.04
PBRM1-206ENST00000409114 FAM9AQ8IZU1 332 aaPredicted RBP13.79□□□□□ -0.2
PBRM1-206ENST00000409114 SUPT5HO00267 1087 aaKnown RBP13.7□□□□□ -0.22
PBRM1-206ENST00000409114 SHROOM4Q9ULL8 1493 aa13.63□□□□□ -0.23
PBRM1-206ENST00000409114 APLP2Q06481 763 aa13.3□□□□□ -0.28
PBRM1-206ENST00000409114 ABCC9O60706 1549 aa13.23□□□□□ -0.29
PBRM1-206ENST00000409114 EHMT2Q96KQ7 1210 aa13.04□□□□□ -0.32
PBRM1-206ENST00000409114 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.34
PBRM1-206ENST00000409114 ATP1B4Q9UN42 357 aaPredicted RBP12.93□□□□□ -0.34
PBRM1-206ENST00000409114 TRIM41Q8WV44 630 aa12.9□□□□□ -0.34
PBRM1-206ENST00000409114 RANGAP1P46060 587 aaPredicted RBP12.82□□□□□ -0.36
PBRM1-206ENST00000409114 PELP1Q8IZL8 1130 aaKnown RBP12.81□□□□□ -0.36
PBRM1-206ENST00000409114 UBTFP17480 764 aaKnown RBP12.8□□□□□ -0.36
PBRM1-206ENST00000409114 MYT1LQ9UL68 1186 aa12.78□□□□□ -0.36
PBRM1-206ENST00000409114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.74□□□□□ -0.37
PBRM1-206ENST00000409114 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
PBRM1-206ENST00000409114 MYT1Q01538 1121 aa12.73□□□□□ -0.37
PBRM1-206ENST00000409114 TTBK1Q5TCY1 1321 aaPredicted RBP12.66□□□□□ -0.38
PBRM1-206ENST00000409114 FBLN2P98095 1184 aa12.56□□□□□ -0.4
PBRM1-206ENST00000409114 CCDC180Q9P1Z9 1646 aa12.49□□□□□ -0.41
PBRM1-206ENST00000409114 RB1CC1Q8TDY2 1594 aa12.48□□□□□ -0.41
PBRM1-206ENST00000409114 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
PBRM1-206ENST00000409114 SCRIBQ14160 1630 aa12.4□□□□□ -0.42
PBRM1-206ENST00000409114 NACADO15069 1562 aa12.29□□□□□ -0.44
PBRM1-206ENST00000409114 ESF1Q9H501 851 aaKnown RBP12.26□□□□□ -0.45
PBRM1-206ENST00000409114 CHIC1Q5VXU3 224 aa12.25□□□□□ -0.45
PBRM1-206ENST00000409114 CDK11AQ9UQ88 783 aaPredicted RBP12.21□□□□□ -0.45
PBRM1-206ENST00000409114 PCGF6Q9BYE7 350 aa12.18□□□□□ -0.46
PBRM1-206ENST00000409114 ZCCHC6Q5VYS8 1495 aaKnown RBP12.18□□□□□ -0.46
PBRM1-206ENST00000409114 ERCC6Q03468 1493 aa12.16□□□□□ -0.46
PBRM1-206ENST00000409114 CHMP7Q8WUX9 453 aaPredicted RBP12.15□□□□□ -0.46
PBRM1-206ENST00000409114 CENPBP07199 599 aaPredicted RBP12.15□□□□□ -0.46
PBRM1-206ENST00000409114 CCER1Q8TC90 406 aaPredicted RBP12.15□□□□□ -0.47
PBRM1-206ENST00000409114 ITGAEP38570 1179 aa12.14□□□□□ -0.47
PBRM1-206ENST00000409114 ZEB1P37275 1124 aaPredicted RBP12.07□□□□□ -0.48
PBRM1-206ENST00000409114 BCANQ96GW7 911 aa12.07□□□□□ -0.48
PBRM1-206ENST00000409114 FAM50AQ14320 339 aaKnown RBP12.02□□□□□ -0.48
PBRM1-206ENST00000409114 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
PBRM1-206ENST00000409114 BAZ1BQ9UIG0 1483 aaKnown RBP12□□□□□ -0.49
PBRM1-206ENST00000409114 TRIM52Q96A61 297 aa11.99□□□□□ -0.49
PBRM1-206ENST00000409114 ERICH6Q7L0X2 663 aa11.97□□□□□ -0.49
PBRM1-206ENST00000409114 CSRNP3Q8WYN3 585 aa11.96□□□□□ -0.49
PBRM1-206ENST00000409114 STAG3Q9UJ98 1225 aa11.96□□□□□ -0.5
PBRM1-206ENST00000409114 POLR3GLQ9BT43 218 aa11.95□□□□□ -0.5
PBRM1-206ENST00000409114 P3H3Q8IVL6 736 aa11.94□□□□□ -0.5
PBRM1-206ENST00000409114 ARID3CA6NKF2 412 aa11.93□□□□□ -0.5
PBRM1-206ENST00000409114 ZNF777Q9ULD5 760 aaPredicted RBP11.93□□□□□ -0.5
PBRM1-206ENST00000409114 TRHP20396 242 aaPredicted RBP11.93□□□□□ -0.5
PBRM1-206ENST00000409114 PPARGC1BQ86YN6 1023 aaKnown RBP11.92□□□□□ -0.5
PBRM1-206ENST00000409114 HRCP23327 699 aa11.9□□□□□ -0.5
PBRM1-206ENST00000409114 PLPPR3Q6T4P5 718 aa11.88□□□□□ -0.51
PBRM1-206ENST00000409114 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
PBRM1-206ENST00000409114 DCAF1Q9Y4B6 1507 aa11.84□□□□□ -0.51
PBRM1-206ENST00000409114 BAZ1AQ9NRL2 1556 aaPredicted RBP11.8□□□□□ -0.52
PBRM1-206ENST00000409114 TRIM26Q12899 539 aaPredicted RBP11.8□□□□□ -0.52
PBRM1-206ENST00000409114 ARID4BQ4LE39 1312 aaPredicted RBP11.8□□□□□ -0.52
PBRM1-206ENST00000409114 TSPY4P0CV99 314 aa11.8□□□□□ -0.52
PBRM1-206ENST00000409114 TSPY10P0CW01 314 aa11.8□□□□□ -0.52
PBRM1-206ENST00000409114 PLEKHD1A6NEE1 506 aa11.79□□□□□ -0.52
PBRM1-206ENST00000409114 CECR2Q9BXF3 1484 aa11.79□□□□□ -0.52
PBRM1-206ENST00000409114 LOC105371045A0A1W2PR82 267 aa11.79□□□□□ -0.52
PBRM1-206ENST00000409114 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
PBRM1-206ENST00000409114 KCNH8Q96L42 1107 aa11.75□□□□□ -0.53
PBRM1-206ENST00000409114 SMARCA2P51531 1590 aa11.74□□□□□ -0.53
PBRM1-206ENST00000409114 NEFMP07197 916 aa11.73□□□□□ -0.53
PBRM1-206ENST00000409114 NEFLP07196 543 aa11.72□□□□□ -0.53
PBRM1-206ENST00000409114 ZNF326Q5BKZ1 582 aaKnown RBP11.71□□□□□ -0.54
PBRM1-206ENST00000409114 MYO15BQ96JP2 1530 aa11.71□□□□□ -0.54
PBRM1-206ENST00000409114 KIF27Q86VH2 1401 aa11.69□□□□□ -0.54
PBRM1-206ENST00000409114 MTUS2Q5JR59 1369 aa11.67□□□□□ -0.54
PBRM1-206ENST00000409114 WRNQ14191 1432 aaPredicted RBP eCLIP11.66□□□□□ -0.54
PBRM1-206ENST00000409114 PPP1R15AO75807 674 aaPredicted RBP11.65□□□□□ -0.54
PBRM1-206ENST00000409114 RSF1Q96T23 1441 aaPredicted RBP11.64□□□□□ -0.55
PBRM1-206ENST00000409114 ACIN1Q9UKV3 1341 aaKnown RBP11.63□□□□□ -0.55
PBRM1-206ENST00000409114 C14orf37Q86TY3 774 aa11.63□□□□□ -0.55
PBRM1-206ENST00000409114 YTHDC1Q96MU7 727 aaKnown RBP11.63□□□□□ -0.55
PBRM1-206ENST00000409114 EEA1Q15075 1411 aa11.62□□□□□ -0.55
PBRM1-206ENST00000409114 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.62□□□□□ -0.551e-6■■■□□ 19.2
PBRM1-206ENST00000409114 NEUROD1Q13562 356 aa11.6□□□□□ -0.55
PBRM1-206ENST00000409114 CNGB1Q14028 1251 aaPredicted RBP11.6□□□□□ -0.55
PBRM1-206ENST00000409114 CARMIL2Q6F5E8 1435 aa11.6□□□□□ -0.55
PBRM1-206ENST00000409114 SLC24A1O60721 1099 aa11.6□□□□□ -0.55
PBRM1-206ENST00000409114 OSCARQ8IYS5 282 aa11.6□□□□□ -0.55
PBRM1-206ENST00000409114 AEBP2Q6ZN18 517 aaPredicted RBP11.59□□□□□ -0.55
PBRM1-206ENST00000409114 CADPSQ9ULU8 1353 aa11.56□□□□□ -0.56
PBRM1-206ENST00000409114 HDGFP51858 240 aaKnown RBP11.55□□□□□ -0.56
PBRM1-206ENST00000409114 SCAF1Q9H7N4 1312 aaKnown RBP11.54□□□□□ -0.56
PBRM1-206ENST00000409114 HAP1P54257 671 aaPredicted RBP11.53□□□□□ -0.56
PBRM1-206ENST00000409114 CFDP1Q9UEE9 299 aaPredicted RBP11.53□□□□□ -0.56
PBRM1-206ENST00000409114 CEP164Q9UPV0 1460 aa11.51□□□□□ -0.57
PBRM1-206ENST00000409114 SOGA1O94964 1423 aa11.51□□□□□ -0.57
PBRM1-206ENST00000409114 ZBTB47Q9UFB7 747 aaPredicted RBP11.49□□□□□ -0.57
PBRM1-206ENST00000409114 ABCC8Q09428 1581 aa11.49□□□□□ -0.57
PBRM1-206ENST00000409114 CUX2O14529 1486 aa11.49□□□□□ -0.57
PBRM1-206ENST00000409114 CLIP1P30622 1438 aa11.47□□□□□ -0.57
PBRM1-206ENST00000409114 CHIC2Q9UKJ5 165 aa11.47□□□□□ -0.57
PBRM1-206ENST00000409114 CARMIL1Q5VZK9 1371 aa11.47□□□□□ -0.57
PBRM1-206ENST00000409114 NPM2Q86SE8 214 aaKnown RBP11.46□□□□□ -0.57
PBRM1-206ENST00000409114 EIF4G1Q04637 1599 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms