RNA–Protein interactions for RNA: ENST00000408512.1

RNU4ATAC16P-201, Transcript of RNA, U4atac small nuclear 16, pseudogene, humanhuman

BASIC

Gene RNU4ATAC16P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC16P-201ENST00000408512 RELNP78509 3460 aa0.73□□□□□ -2.29
RNU4ATAC16P-201ENST00000408512 CHD8Q9HCK8 2581 aa0.73□□□□□ -2.29
RNU4ATAC16P-201ENST00000408512 DNAH8Q96JB1 4490 aa0.73□□□□□ -2.29
RNU4ATAC16P-201ENST00000408512 TNXBP22105 4242 aa0.73□□□□□ -2.29
RNU4ATAC16P-201ENST00000408512 KRTAP21-3Q3LHN1 58 aa0.73□□□□□ -2.29
RNU4ATAC16P-201ENST00000408512 FRAS1Q86XX4 4008 aa0.73□□□□□ -2.29
RNU4ATAC16P-201ENST00000408512 DNAH7Q8WXX0 4024 aa0.73□□□□□ -2.29
RNU4ATAC16P-201ENST00000408512 AKAP9Q99996 3911 aa0.72□□□□□ -2.29
RNU4ATAC16P-201ENST00000408512 FBN2P35556 2912 aa0.72□□□□□ -2.29
RNU4ATAC16P-201ENST00000408512 MUC19Q7Z5P9 8384 aa0.71□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 RANBP2P49792 3224 aaKnown RBP0.71□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 DEFB108AA8MXU0 73 aa0.71□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 DEFB135Q30KP9 77 aa0.71□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 CEP250Q9BV73 2442 aa0.71□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 HECTD4Q9Y4D8 3996 aa0.71□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 EPG5Q9HCE0 2579 aa0.7□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 DYNC2H1Q8NCM8 4307 aaKnown RBP0.7□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 RIF1Q5UIP0 2472 aaKnown RBP0.7□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 APCP25054 2843 aa0.7□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 SPTBN5Q9NRC6 3674 aaKnown RBP0.7□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 GCN1Q92616 2671 aaKnown RBP0.7□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 FRYQ5TBA9 3013 aa0.69□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 H0YGG7 62 aa0.69□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 M0QZ58 72 aa0.69□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 ZZEF1O43149 2961 aa0.69□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 USP24Q9UPU5 2620 aa0.69□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 DNAH2Q9P225 4427 aa0.69□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 COL12A1Q99715 3063 aa0.68□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 HIVEP3Q5T1R4 2406 aa0.68□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 LAMA5O15230 3695 aa0.68□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 USP9YO00507 2555 aaPredicted RBP0.68□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 ANK3Q12955 4377 aaKnown RBP0.68□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 SMR3AQ99954 134 aa0.68□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 CUBNO60494 3623 aa0.68□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 SZT2Q5T011 3432 aa0.68□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 NF1P21359 2839 aa0.68□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 DCHS2Q6V1P9 2916 aa0.68□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 APC2O95996 2303 aa0.67□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 FLNCQ14315 2725 aa0.67□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 HUWE1Q7Z6Z7 4374 aaKnown RBP0.67□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 FAM186AA6NE01 2351 aa0.67□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 M0R2T5 61 aa0.67□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 KRTAP2-3P0C7H8 128 aa0.67□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 KRTAP2-4Q9BYR9 128 aa0.67□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 KRTAP2-1Q9BYU5 128 aa0.67□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 CFAP54Q96N23 3096 aa0.67□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 HSPG2P98160 4391 aa0.66□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 DNAH6Q9C0G6 4158 aa0.66□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 PKD1P98161 4303 aa0.65□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 FBN3Q75N90 2809 aa0.65□□□□□ -2.3
RNU4ATAC16P-201ENST00000408512 LRRK2Q5S007 2527 aa0.65□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 COL6A3P12111 3177 aa0.65□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 TACC2O95359 2948 aa0.65□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 NBEAL2Q6ZNJ1 2754 aa0.64□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 SPG11Q96JI7 2443 aa0.64□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 ZFYVE26Q68DK2 2539 aa0.64□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 NCOR2Q9Y618 2525 aa0.64□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 DNAH9Q9NYC9 4486 aa0.64□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 FLGP20930 4061 aaPredicted RBP0.64□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 UTP20O75691 2785 aaKnown RBP0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 ITPR3Q14573 2671 aa0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 SETXQ7Z333 2677 aaKnown RBP0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 STAB1Q9NY15 2570 aa0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 FAT3Q8TDW7 4589 aa0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 SMG1Q96Q15 3661 aaKnown RBP0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 ANKHD1Q8IWZ3 2542 aaKnown RBP0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 ACANP16112 2415 aa0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 PRM1P04553 51 aa0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 TNP1P09430 55 aa0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 APELAP0DMC3 54 aa0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 SPINK6Q6UWN8 80 aa0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 PTPN13Q12923 2485 aa0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 DNAH10Q8IVF4 4471 aa0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 C5orf42Q9H799 3197 aa0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 MTORP42345 2549 aa0.63□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 DNAH1Q9P2D7 4330 aa0.62□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 FRYLO94915 3013 aa0.62□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 DMXL1Q9Y485 3027 aa0.62□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 PKD1L1Q8TDX9 2849 aa0.62□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 HIVEP1P15822 2718 aa0.62□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 ATMQ13315 3056 aa0.62□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 CELSR3Q9NYQ7 3312 aa0.62□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 DEFB1P60022 68 aa0.62□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 KRTAP5-7Q6L8G8 165 aa0.62□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 NSD1Q96L73 2696 aaPredicted RBP0.62□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 NOTCH1P46531 2555 aa0.62□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 APOBP04114 4563 aaKnown RBP0.62□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 UNC79Q9P2D8 2635 aa0.62□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 TRRAPQ9Y4A5 3859 aa0.62□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 DMXL2Q8TDJ6 3036 aa0.61□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 PLECQ15149 4684 aaKnown RBP0.61□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 KRTAP19-3Q7Z4W3 81 aa0.61□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 CSMD1Q96PZ7 3565 aa0.61□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 HTTP42858 3142 aa0.61□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 TRIOO75962 3097 aa0.6□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 PRUNE2Q8WUY3 3088 aa0.6□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 C9orf92A6NGG3 77 aa0.6□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 H3BNG1 76 aa0.6□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 PKHD1P08F94 4074 aa0.6□□□□□ -2.31
RNU4ATAC16P-201ENST00000408512 CMYA5Q8N3K9 4069 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms