RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 Q1T7F1 81 aa8.25□□□□□ -1.09
GSE1-203ENST00000405402 IGLV7-46A0A075B6I9 117 aa8.24□□□□□ -1.09
GSE1-203ENST00000405402 PLAC8Q9NZF1 115 aa8.23□□□□□ -1.09
GSE1-203ENST00000405402 KRTAP10-2P60368 255 aa8.22□□□□□ -1.09
GSE1-203ENST00000405402 A0A087X002 238 aa8.21□□□□□ -1.09
GSE1-203ENST00000405402 NOTCH2NLQ7Z3S9 236 aa8.21□□□□□ -1.09
GSE1-203ENST00000405402 HRES1P13985 223 aa8.21□□□□□ -1.1
GSE1-203ENST00000405402 KRTAP29-1A8MX34 341 aaPredicted RBP8.17□□□□□ -1.1
GSE1-203ENST00000405402 UQCR11O14957 56 aa8.17□□□□□ -1.1
GSE1-203ENST00000405402 SRRM2Q9UQ35 2752 aaKnown RBP8.14□□□□□ -1.11
GSE1-203ENST00000405402 MIR22HGQ0VDD5 57 aa8.14□□□□□ -1.11
GSE1-203ENST00000405402 Q5VV11 94 aa8.14□□□□□ -1.11
GSE1-203ENST00000405402 KRTAP10-1P60331 282 aa8.13□□□□□ -1.11
GSE1-203ENST00000405402 ZCCHC13Q8WW36 166 aaKnown RBP8.13□□□□□ -1.11
GSE1-203ENST00000405402 Q6ZRN7 208 aaPredicted RBP8.1□□□□□ -1.11
GSE1-203ENST00000405402 ANK3Q12955 4377 aaKnown RBP8.09□□□□□ -1.11
GSE1-203ENST00000405402 Q5W150 140 aa8.09□□□□□ -1.11
GSE1-203ENST00000405402 SPINK7P58062 85 aa8.09□□□□□ -1.11
GSE1-203ENST00000405402 CDC42SE1Q9NRR8 79 aa8.09□□□□□ -1.11
GSE1-203ENST00000405402 Q6ZR54 194 aa8.05□□□□□ -1.12
GSE1-203ENST00000405402 KTN1-AS1Q86SY8 53 aa8.05□□□□□ -1.12
GSE1-203ENST00000405402 A8MU10 97 aa8.04□□□□□ -1.12
GSE1-203ENST00000405402 LINC00483Q53H64 154 aa8.03□□□□□ -1.12
GSE1-203ENST00000405402 Q75L30 129 aa8.03□□□□□ -1.12
GSE1-203ENST00000405402 LINC01558Q9Y6Z2 57 aa8.02□□□□□ -1.13
GSE1-203ENST00000405402 FBN3Q75N90 2809 aa7.99□□□□□ -1.13
GSE1-203ENST00000405402 PRAC1Q96KF2 57 aa7.98□□□□□ -1.13
GSE1-203ENST00000405402 A0A0D9SG42 100 aa7.98□□□□□ -1.13
GSE1-203ENST00000405402 KRTAP13-1Q8IUC0 172 aa7.98□□□□□ -1.13
GSE1-203ENST00000405402 LCE6AA0A183 80 aa7.96□□□□□ -1.13
GSE1-203ENST00000405402 LCA10Q71F78 164 aa7.93□□□□□ -1.14
GSE1-203ENST00000405402 J3QL48 77 aa7.91□□□□□ -1.14
GSE1-203ENST00000405402 CSMD3Q7Z407 3707 aa7.9□□□□□ -1.15
GSE1-203ENST00000405402 RBM12B-AS1Q9P1G2 102 aa7.89□□□□□ -1.15
GSE1-203ENST00000405402 KRTAP13-2Q52LG2 175 aa7.88□□□□□ -1.15
GSE1-203ENST00000405402 AKAP9Q99996 3911 aa7.88□□□□□ -1.15
GSE1-203ENST00000405402 COL7A1Q02388 2944 aa7.88□□□□□ -1.15
GSE1-203ENST00000405402 DMAC1Q96GE9 116 aa7.85□□□□□ -1.15
GSE1-203ENST00000405402 A0A1B0GU33 70 aa7.84□□□□□ -1.15
GSE1-203ENST00000405402 LINC01554Q52M75 96 aa7.83□□□□□ -1.16
GSE1-203ENST00000405402 CRIPTQ9P021 101 aa7.83□□□□□ -1.16
GSE1-203ENST00000405402 SPINT4Q6UDR6 99 aa7.8□□□□□ -1.16
GSE1-203ENST00000405402 MEGF8Q7Z7M0 2845 aa7.75□□□□□ -1.17
GSE1-203ENST00000405402 CSAG1Q6PB30 78 aa7.72□□□□□ -1.17
GSE1-203ENST00000405402 SPATA8Q6RVD6 105 aa7.7□□□□□ -1.18
GSE1-203ENST00000405402 COX6B2Q6YFQ2 88 aa7.68□□□□□ -1.18
GSE1-203ENST00000405402 Q5VSD8 79 aa7.68□□□□□ -1.18
GSE1-203ENST00000405402 ADM2Q7Z4H4 148 aa7.68□□□□□ -1.18
GSE1-203ENST00000405402 Q6ZSA8 131 aa7.66□□□□□ -1.18
GSE1-203ENST00000405402 ASB16-AS1Q495Z4 193 aa7.66□□□□□ -1.18
GSE1-203ENST00000405402 H3BS24 57 aa7.62□□□□□ -1.19
GSE1-203ENST00000405402 A6NN06 94 aa7.6□□□□□ -1.19
GSE1-203ENST00000405402 KRTAP1-4P0C5Y4 121 aa7.59□□□□□ -1.19
GSE1-203ENST00000405402 KRTAP21-3Q3LHN1 58 aa7.57□□□□□ -1.2
GSE1-203ENST00000405402 S4R3F8 94 aa7.57□□□□□ -1.2
GSE1-203ENST00000405402 H1FX-AS1Q4G0G2 97 aa7.54□□□□□ -1.2
GSE1-203ENST00000405402 DNHD1Q96M86 4753 aa7.51□□□□□ -1.21
GSE1-203ENST00000405402 RPL37P61927 97 aaKnown RBP7.46□□□□□ -1.22
GSE1-203ENST00000405402 KRTAP16-1A8MUX0 517 aa7.41□□□□□ -1.22
GSE1-203ENST00000405402 R4GN34 69 aa7.39□□□□□ -1.23
GSE1-203ENST00000405402 RPS29P62273 56 aaKnown RBP7.38□□□□□ -1.23
GSE1-203ENST00000405402 CAMK2N1Q7Z7J9 78 aa7.37□□□□□ -1.23
GSE1-203ENST00000405402 A8MUU9 505 aa7.36□□□□□ -1.23
GSE1-203ENST00000405402 ROMO1P60602 79 aa7.35□□□□□ -1.23
GSE1-203ENST00000405402 KRTAP13-3Q3SY46 172 aa7.34□□□□□ -1.23
GSE1-203ENST00000405402 C20orf166-AS1Q96NR2 134 aa7.34□□□□□ -1.23
GSE1-203ENST00000405402 HUWE1Q7Z6Z7 4374 aaKnown RBP7.33□□□□□ -1.24
GSE1-203ENST00000405402 M0QZ58 72 aa7.33□□□□□ -1.24
GSE1-203ENST00000405402 H0YAA0 97 aa7.25□□□□□ -1.25
GSE1-203ENST00000405402 M0R2T5 61 aa7.25□□□□□ -1.25
GSE1-203ENST00000405402 SEC61BP60468 96 aaKnown RBP7.24□□□□□ -1.25
GSE1-203ENST00000405402 KRTAP25-1Q3LHN0 102 aa7.22□□□□□ -1.25
GSE1-203ENST00000405402 DNAH10Q8IVF4 4471 aa7.2□□□□□ -1.26
GSE1-203ENST00000405402 XP32Q5T750 250 aa7.19□□□□□ -1.26
GSE1-203ENST00000405402 DNAH9Q9NYC9 4486 aa7.19□□□□□ -1.26
GSE1-203ENST00000405402 PRKDCP78527 4128 aaKnown RBP7.17□□□□□ -1.26
GSE1-203ENST00000405402 ANK2Q01484 3957 aa7.16□□□□□ -1.26
GSE1-203ENST00000405402 C10orf95Q9H7T3 257 aa7.13□□□□□ -1.27
GSE1-203ENST00000405402 PLECQ15149 4684 aaKnown RBP7.13□□□□□ -1.27
GSE1-203ENST00000405402 P0C880 135 aa7.09□□□□□ -1.27
GSE1-203ENST00000405402 LUZP6Q538Z0 58 aa7.06□□□□□ -1.28
GSE1-203ENST00000405402 KRTAP3-1Q9BYR8 98 aa7.05□□□□□ -1.28
GSE1-203ENST00000405402 A0A1B0GVY2 172 aa7.04□□□□□ -1.28
GSE1-203ENST00000405402 STARD9Q9P2P6 4700 aa7.02□□□□□ -1.29
GSE1-203ENST00000405402 DNAH11Q96DT5 4516 aa7□□□□□ -1.29
GSE1-203ENST00000405402 KRTAP10-8P60410 259 aa6.97□□□□□ -1.29
GSE1-203ENST00000405402 NDUFAF8A1L188 74 aa6.94□□□□□ -1.3
GSE1-203ENST00000405402 DNAH1Q9P2D7 4330 aa6.93□□□□□ -1.3
GSE1-203ENST00000405402 LYSTQ99698 3801 aa6.92□□□□□ -1.3
GSE1-203ENST00000405402 KMT2AQ03164 3969 aa6.88□□□□□ -1.31
GSE1-203ENST00000405402 DNAH5Q8TE73 4624 aa6.85□□□□□ -1.31
GSE1-203ENST00000405402 CMYA5Q8N3K9 4069 aa6.84□□□□□ -1.31
GSE1-203ENST00000405402 TPRXLQ17RH7 258 aa6.84□□□□□ -1.31
GSE1-203ENST00000405402 FAT1Q14517 4588 aa6.81□□□□□ -1.32
GSE1-203ENST00000405402 DNAH8Q96JB1 4490 aa6.8□□□□□ -1.32
GSE1-203ENST00000405402 KRTAP12-2P59991 146 aa6.8□□□□□ -1.32
GSE1-203ENST00000405402 KRTAP13-4Q3LI77 160 aa6.8□□□□□ -1.32
GSE1-203ENST00000405402 PLAC4Q8WY50 150 aa6.78□□□□□ -1.32
GSE1-203ENST00000405402 LRP1BQ9NZR2 4599 aa6.76□□□□□ -1.33
GSE1-203ENST00000405402 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms