RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 SVEP1Q4LDE5 3571 aa10.5□□□□□ -0.73
SNED1-204ENST00000401884 VWFP04275 2813 aa10.49□□□□□ -0.73
SNED1-204ENST00000401884 Q6ZRN7 208 aaPredicted RBP10.47□□□□□ -0.73
SNED1-204ENST00000401884 KRTAP10-1P60331 282 aa10.47□□□□□ -0.73
SNED1-204ENST00000401884 PDZD2O15018 2839 aa10.44□□□□□ -0.74
SNED1-204ENST00000401884 FBN1P35555 2871 aaKnown RBP10.42□□□□□ -0.74
SNED1-204ENST00000401884 CUBNO60494 3623 aa10.42□□□□□ -0.74
SNED1-204ENST00000401884 A0A087X002 238 aa10.41□□□□□ -0.74
SNED1-204ENST00000401884 NOTCH2NLQ7Z3S9 236 aa10.41□□□□□ -0.74
SNED1-204ENST00000401884 LCA10Q71F78 164 aa10.4□□□□□ -0.74
SNED1-204ENST00000401884 LCE6AA0A183 80 aa10.4□□□□□ -0.75
SNED1-204ENST00000401884 SPINK7P58062 85 aa10.38□□□□□ -0.75
SNED1-204ENST00000401884 OTOGQ6ZRI0 2925 aa10.37□□□□□ -0.75
SNED1-204ENST00000401884 KRTAP13-1Q8IUC0 172 aa10.35□□□□□ -0.75
SNED1-204ENST00000401884 A0A1B0GU33 70 aa10.3□□□□□ -0.76
SNED1-204ENST00000401884 DMAC1Q96GE9 116 aa10.3□□□□□ -0.76
SNED1-204ENST00000401884 A0A0D9SG42 100 aa10.28□□□□□ -0.76
SNED1-204ENST00000401884 PKD1L1Q8TDX9 2849 aa10.27□□□□□ -0.76
SNED1-204ENST00000401884 J3QL48 77 aa10.27□□□□□ -0.77
SNED1-204ENST00000401884 RBM12B-AS1Q9P1G2 102 aa10.22□□□□□ -0.77
SNED1-204ENST00000401884 SPINT4Q6UDR6 99 aa10.21□□□□□ -0.78
SNED1-204ENST00000401884 SPENQ96T58 3664 aaKnown RBP10.2□□□□□ -0.78
SNED1-204ENST00000401884 TGP01266 2768 aa10.2□□□□□ -0.78
SNED1-204ENST00000401884 CRIPTQ9P021 101 aa10.19□□□□□ -0.78
SNED1-204ENST00000401884 ASB16-AS1Q495Z4 193 aa10.18□□□□□ -0.78
SNED1-204ENST00000401884 PRAC1Q96KF2 57 aa10.16□□□□□ -0.78
SNED1-204ENST00000401884 COX6B2Q6YFQ2 88 aa10.15□□□□□ -0.78
SNED1-204ENST00000401884 NBPF19A0A087WUL8 3843 aa10.13□□□□□ -0.79
SNED1-204ENST00000401884 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
SNED1-204ENST00000401884 CSMD2Q7Z408 3487 aa10.13□□□□□ -0.79
SNED1-204ENST00000401884 Q6ZSA8 131 aa10.12□□□□□ -0.79
SNED1-204ENST00000401884 LINC01554Q52M75 96 aa10.12□□□□□ -0.79
SNED1-204ENST00000401884 ZFHX3Q15911 3703 aa10.09□□□□□ -0.79
SNED1-204ENST00000401884 TENM2Q9NT68 2774 aa10.08□□□□□ -0.8
SNED1-204ENST00000401884 Q5VSD8 79 aa10.01□□□□□ -0.81
SNED1-204ENST00000401884 A8MU10 97 aa10.01□□□□□ -0.81
SNED1-204ENST00000401884 BSNQ9UPA5 3926 aa9.97□□□□□ -0.81
SNED1-204ENST00000401884 S4R3F8 94 aa9.97□□□□□ -0.81
SNED1-204ENST00000401884 CSAG1Q6PB30 78 aa9.96□□□□□ -0.81
SNED1-204ENST00000401884 RPS29P62273 56 aaKnown RBP9.92□□□□□ -0.82
SNED1-204ENST00000401884 SPATA8Q6RVD6 105 aa9.92□□□□□ -0.82
SNED1-204ENST00000401884 H1FX-AS1Q4G0G2 97 aa9.89□□□□□ -0.83
SNED1-204ENST00000401884 A6NN06 94 aa9.85□□□□□ -0.83
SNED1-204ENST00000401884 RPL37P61927 97 aaKnown RBP9.84□□□□□ -0.83
SNED1-204ENST00000401884 KRTAP1-4P0C5Y4 121 aa9.78□□□□□ -0.84
SNED1-204ENST00000401884 TRRAPQ9Y4A5 3859 aa9.78□□□□□ -0.84
SNED1-204ENST00000401884 CAMK2N1Q7Z7J9 78 aa9.74□□□□□ -0.85
SNED1-204ENST00000401884 R4GN34 69 aa9.74□□□□□ -0.85
SNED1-204ENST00000401884 FBN3Q75N90 2809 aa9.73□□□□□ -0.85
SNED1-204ENST00000401884 SRRM2Q9UQ35 2752 aaKnown RBP9.71□□□□□ -0.85
SNED1-204ENST00000401884 SEC61BP60468 96 aaKnown RBP9.71□□□□□ -0.86
SNED1-204ENST00000401884 ROMO1P60602 79 aa9.69□□□□□ -0.86
SNED1-204ENST00000401884 A8MUU9 505 aa9.67□□□□□ -0.86
SNED1-204ENST00000401884 ADM2Q7Z4H4 148 aa9.67□□□□□ -0.86
SNED1-204ENST00000401884 ANK3Q12955 4377 aaKnown RBP9.66□□□□□ -0.86
SNED1-204ENST00000401884 C20orf166-AS1Q96NR2 134 aa9.64□□□□□ -0.87
SNED1-204ENST00000401884 KRTAP21-3Q3LHN1 58 aa9.61□□□□□ -0.87
SNED1-204ENST00000401884 M0QZ58 72 aa9.59□□□□□ -0.87
SNED1-204ENST00000401884 KRTAP16-1A8MUX0 517 aa9.57□□□□□ -0.88
SNED1-204ENST00000401884 M0R2T5 61 aa9.51□□□□□ -0.89
SNED1-204ENST00000401884 MEGF8Q7Z7M0 2845 aa9.49□□□□□ -0.89
SNED1-204ENST00000401884 LUZP6Q538Z0 58 aa9.49□□□□□ -0.89
SNED1-204ENST00000401884 VPS13CQ709C8 3753 aa9.49□□□□□ -0.89
SNED1-204ENST00000401884 KRTAP13-3Q3SY46 172 aa9.47□□□□□ -0.89
SNED1-204ENST00000401884 KRTAP25-1Q3LHN0 102 aa9.45□□□□□ -0.9
SNED1-204ENST00000401884 COL7A1Q02388 2944 aa9.44□□□□□ -0.9
SNED1-204ENST00000401884 H3BS24 57 aa9.43□□□□□ -0.9
SNED1-204ENST00000401884 XP32Q5T750 250 aa9.33□□□□□ -0.92
SNED1-204ENST00000401884 H0YAA0 97 aa9.31□□□□□ -0.92
SNED1-204ENST00000401884 ZNF469Q96JG9 3925 aaPredicted RBP9.3□□□□□ -0.92
SNED1-204ENST00000401884 A0A1B0GVY2 172 aa9.13□□□□□ -0.95
SNED1-204ENST00000401884 KRTAP10-8P60410 259 aa9.1□□□□□ -0.95
SNED1-204ENST00000401884 P0C880 135 aa9.06□□□□□ -0.96
SNED1-204ENST00000401884 TPRXLQ17RH7 258 aa9.06□□□□□ -0.96
SNED1-204ENST00000401884 PLAC4Q8WY50 150 aa9.05□□□□□ -0.96
SNED1-204ENST00000401884 C10orf95Q9H7T3 257 aa9.03□□□□□ -0.96
SNED1-204ENST00000401884 CSMD3Q7Z407 3707 aa9□□□□□ -0.97
SNED1-204ENST00000401884 KRTAP3-1Q9BYR8 98 aa8.96□□□□□ -0.98
SNED1-204ENST00000401884 A0A0A0MQY5 61 aa8.95□□□□□ -0.98
SNED1-204ENST00000401884 NDUFAF8A1L188 74 aa8.95□□□□□ -0.98
SNED1-204ENST00000401884 HUWE1Q7Z6Z7 4374 aaKnown RBP8.94□□□□□ -0.98
SNED1-204ENST00000401884 AKAP9Q99996 3911 aa8.89□□□□□ -0.99
SNED1-204ENST00000401884 TNP1P09430 55 aa8.83□□□□□ -1
SNED1-204ENST00000401884 PP632Q6XCG6 107 aa8.68□□□□□ -1.02
SNED1-204ENST00000401884 KRTAP12-2P59991 146 aa8.68□□□□□ -1.02
SNED1-204ENST00000401884 KRTAP10-6P60371 365 aaPredicted RBP8.64□□□□□ -1.03
SNED1-204ENST00000401884 DNAH9Q9NYC9 4486 aa8.63□□□□□ -1.03
SNED1-204ENST00000401884 KRTAP12-1P59990 96 aa8.6□□□□□ -1.03
SNED1-204ENST00000401884 KRTAP13-4Q3LI77 160 aa8.59□□□□□ -1.03
SNED1-204ENST00000401884 KRTAP10-4P60372 401 aaPredicted RBP8.58□□□□□ -1.04
SNED1-204ENST00000401884 PLECQ15149 4684 aaKnown RBP8.53□□□□□ -1.04
SNED1-204ENST00000401884 MT1HL1P0DM35 61 aa8.5□□□□□ -1.05
SNED1-204ENST00000401884 KRTAP10-10P60014 251 aa8.46□□□□□ -1.05
SNED1-204ENST00000401884 DNAH10Q8IVF4 4471 aa8.45□□□□□ -1.06
SNED1-204ENST00000401884 DNAH11Q96DT5 4516 aa8.45□□□□□ -1.06
SNED1-204ENST00000401884 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
SNED1-204ENST00000401884 DNAH1Q9P2D7 4330 aa8.44□□□□□ -1.06
SNED1-204ENST00000401884 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
SNED1-204ENST00000401884 DNAH5Q8TE73 4624 aa8.39□□□□□ -1.07
SNED1-204ENST00000401884 DNHD1Q96M86 4753 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms