RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 TGP01266 2768 aa4.11□□□□□ -1.75
CHD8-201ENST00000399982 CELSR3Q9NYQ7 3312 aa4.11□□□□□ -1.75
CHD8-201ENST00000399982 RANBP2P49792 3224 aaKnown RBP4.09□□□□□ -1.76
CHD8-201ENST00000399982 DSPP15924 2871 aaKnown RBP4.08□□□□□ -1.76
CHD8-201ENST00000399982 FLNCQ14315 2725 aa4.08□□□□□ -1.76
CHD8-201ENST00000399982 WDFY4Q6ZS81 3184 aa4.07□□□□□ -1.76
CHD8-201ENST00000399982 FRYQ5TBA9 3013 aa4.07□□□□□ -1.76
CHD8-201ENST00000399982 VPS13AQ96RL7 3174 aa4.06□□□□□ -1.76
CHD8-201ENST00000399982 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
CHD8-201ENST00000399982 LRBAP50851 2863 aa4.05□□□□□ -1.76
CHD8-201ENST00000399982 UNC80Q8N2C7 3258 aa4.05□□□□□ -1.76
CHD8-201ENST00000399982 MGAQ8IWI9 3026 aa4.05□□□□□ -1.76
CHD8-201ENST00000399982 CHD7Q9P2D1 2997 aa4.05□□□□□ -1.76
CHD8-201ENST00000399982 TRIOO75962 3097 aa4.02□□□□□ -1.77
CHD8-201ENST00000399982 CHD9Q3L8U1 2897 aa4.02□□□□□ -1.77
CHD8-201ENST00000399982 HIVEP1P15822 2718 aa4.01□□□□□ -1.77
CHD8-201ENST00000399982 TENM3Q9P273 2699 aa4□□□□□ -1.77
CHD8-201ENST00000399982 KRTAP10-6P60371 365 aaPredicted RBP3.99□□□□□ -1.77
CHD8-201ENST00000399982 KRTAP3-1Q9BYR8 98 aa3.97□□□□□ -1.77
CHD8-201ENST00000399982 NBEAQ8NFP9 2946 aa3.97□□□□□ -1.77
CHD8-201ENST00000399982 ASH1LQ9NR48 2969 aaKnown RBP3.95□□□□□ -1.78
CHD8-201ENST00000399982 HTTP42858 3142 aa3.95□□□□□ -1.78
CHD8-201ENST00000399982 TACC2O95359 2948 aa3.95□□□□□ -1.78
CHD8-201ENST00000399982 MKI67P46013 3256 aaKnown RBP3.95□□□□□ -1.78
CHD8-201ENST00000399982 KALRNO60229 2985 aa3.94□□□□□ -1.78
CHD8-201ENST00000399982 DNAH14Q0VDD8 3507 aa3.94□□□□□ -1.78
CHD8-201ENST00000399982 TNRC18O15417 2968 aaPredicted RBP3.92□□□□□ -1.78
CHD8-201ENST00000399982 FRYLO94915 3013 aa3.92□□□□□ -1.78
CHD8-201ENST00000399982 LAMA3Q16787 3333 aa3.91□□□□□ -1.78
CHD8-201ENST00000399982 TENM1Q9UKZ4 2725 aa3.91□□□□□ -1.78
CHD8-201ENST00000399982 LAMA1P25391 3075 aa3.91□□□□□ -1.78
CHD8-201ENST00000399982 COL12A1Q99715 3063 aa3.9□□□□□ -1.78
CHD8-201ENST00000399982 BRCA2P51587 3418 aa3.9□□□□□ -1.79
CHD8-201ENST00000399982 TENM4Q6N022 2769 aa3.89□□□□□ -1.79
CHD8-201ENST00000399982 CFAP47Q6ZTR5 3102 aa3.89□□□□□ -1.79
CHD8-201ENST00000399982 SPEGQ15772 3267 aa3.88□□□□□ -1.79
CHD8-201ENST00000399982 TENM2Q9NT68 2774 aa3.87□□□□□ -1.79
CHD8-201ENST00000399982 USP34Q70CQ2 3546 aa3.86□□□□□ -1.79
CHD8-201ENST00000399982 CELSR2Q9HCU4 2923 aa3.85□□□□□ -1.79
CHD8-201ENST00000399982 PRUNE2Q8WUY3 3088 aa3.85□□□□□ -1.79
CHD8-201ENST00000399982 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
CHD8-201ENST00000399982 ZFHX4Q86UP3 3567 aa3.85□□□□□ -1.79
CHD8-201ENST00000399982 ATMQ13315 3056 aa3.84□□□□□ -1.79
CHD8-201ENST00000399982 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
CHD8-201ENST00000399982 COL6A3P12111 3177 aa3.84□□□□□ -1.8
CHD8-201ENST00000399982 DMXL2Q8TDJ6 3036 aa3.82□□□□□ -1.8
CHD8-201ENST00000399982 KRTAP3-2Q9BYR7 98 aa3.81□□□□□ -1.8
CHD8-201ENST00000399982 NF1P21359 2839 aa3.8□□□□□ -1.8
CHD8-201ENST00000399982 ZZEF1O43149 2961 aa3.79□□□□□ -1.8
CHD8-201ENST00000399982 DMXL1Q9Y485 3027 aa3.79□□□□□ -1.8
CHD8-201ENST00000399982 DCHS2Q6V1P9 2916 aa3.79□□□□□ -1.8
CHD8-201ENST00000399982 PDZD2O15018 2839 aa3.77□□□□□ -1.81
CHD8-201ENST00000399982 VCANP13611 3396 aa3.76□□□□□ -1.81
CHD8-201ENST00000399982 BOD1L1Q8NFC6 3051 aa3.74□□□□□ -1.81
CHD8-201ENST00000399982 ADGRG4Q8IZF6 3080 aa3.73□□□□□ -1.81
CHD8-201ENST00000399982 CDH23Q9H251 3354 aa3.73□□□□□ -1.81
CHD8-201ENST00000399982 KRTAP3-3Q9BYR6 98 aa3.73□□□□□ -1.81
CHD8-201ENST00000399982 CELSR1Q9NYQ6 3014 aa3.72□□□□□ -1.81
CHD8-201ENST00000399982 ZANQ9Y493 2812 aa3.71□□□□□ -1.81
CHD8-201ENST00000399982 SPTBN5Q9NRC6 3674 aaKnown RBP3.71□□□□□ -1.82
CHD8-201ENST00000399982 SZT2Q5T011 3432 aa3.7□□□□□ -1.82
CHD8-201ENST00000399982 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
CHD8-201ENST00000399982 HRNRQ86YZ3 2850 aaPredicted RBP3.68□□□□□ -1.82
CHD8-201ENST00000399982 ASPMQ8IZT6 3477 aa3.68□□□□□ -1.82
CHD8-201ENST00000399982 LOC400499M0QZD8 3231 aa3.67□□□□□ -1.82
CHD8-201ENST00000399982 ZFHX3Q15911 3703 aa3.66□□□□□ -1.82
CHD8-201ENST00000399982 DCHS1Q96JQ0 3298 aa3.66□□□□□ -1.82
CHD8-201ENST00000399982 KRTAP10-7P60409 375 aaPredicted RBP3.66□□□□□ -1.82
CHD8-201ENST00000399982 NBPF19A0A087WUL8 3843 aa3.64□□□□□ -1.83
CHD8-201ENST00000399982 PKD1L1Q8TDX9 2849 aa3.62□□□□□ -1.83
CHD8-201ENST00000399982 SRRM2Q9UQ35 2752 aaKnown RBP3.62□□□□□ -1.83
CHD8-201ENST00000399982 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
CHD8-201ENST00000399982 FBN2P35556 2912 aa3.61□□□□□ -1.83
CHD8-201ENST00000399982 WDFY3Q8IZQ1 3526 aa3.61□□□□□ -1.83
CHD8-201ENST00000399982 LORP23490 312 aaPredicted RBP3.61□□□□□ -1.83
CHD8-201ENST00000399982 KRTAP8-1Q8IUC2 63 aa3.59□□□□□ -1.83
CHD8-201ENST00000399982 MXRA5Q9NR99 2828 aa3.59□□□□□ -1.83
CHD8-201ENST00000399982 VWFP04275 2813 aa3.58□□□□□ -1.84
CHD8-201ENST00000399982 KRTAP19-4Q3LI73 84 aa3.56□□□□□ -1.84
CHD8-201ENST00000399982 MYO15AQ9UKN7 3530 aa3.53□□□□□ -1.84
CHD8-201ENST00000399982 EYSQ5T1H1 3165 aa3.53□□□□□ -1.85
CHD8-201ENST00000399982 SPENQ96T58 3664 aaKnown RBP3.52□□□□□ -1.85
CHD8-201ENST00000399982 MEGF8Q7Z7M0 2845 aa3.51□□□□□ -1.85
CHD8-201ENST00000399982 DMDP11532 3685 aa3.47□□□□□ -1.85
CHD8-201ENST00000399982 LAMA5O15230 3695 aa3.46□□□□□ -1.85
CHD8-201ENST00000399982 FBN3Q75N90 2809 aa3.44□□□□□ -1.86
CHD8-201ENST00000399982 CSMD1Q96PZ7 3565 aa3.44□□□□□ -1.86
CHD8-201ENST00000399982 MT1HL1P0DM35 61 aa3.41□□□□□ -1.86
CHD8-201ENST00000399982 AKAP9Q99996 3911 aa3.4□□□□□ -1.86
CHD8-201ENST00000399982 RELNP78509 3460 aa3.39□□□□□ -1.87
CHD8-201ENST00000399982 SMG1Q96Q15 3661 aaKnown RBP3.37□□□□□ -1.87
CHD8-201ENST00000399982 KRTAP10-4P60372 401 aaPredicted RBP3.35□□□□□ -1.87
CHD8-201ENST00000399982 MUC3AQ02505 3323 aa3.34□□□□□ -1.87
CHD8-201ENST00000399982 COL7A1Q02388 2944 aa3.34□□□□□ -1.87
CHD8-201ENST00000399982 OTOGQ6ZRI0 2925 aa3.31□□□□□ -1.88
CHD8-201ENST00000399982 SPRR2FQ96RM1 72 aa3.3□□□□□ -1.88
CHD8-201ENST00000399982 VPS13CQ709C8 3753 aa3.3□□□□□ -1.88
CHD8-201ENST00000399982 BSNQ9UPA5 3926 aa3.29□□□□□ -1.88
CHD8-201ENST00000399982 ALMS1Q8TCU4 4167 aa3.27□□□□□ -1.89
CHD8-201ENST00000399982 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms