RNA–Protein interactions for RNA: ENST00000399598.6

UBXN2B-201, Transcript of UBX domain protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2B, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-201ENST00000399598 TENM4Q6N022 2769 aa8.8□□□□□ -1
UBXN2B-201ENST00000399598 NIPBLQ6KC79 2804 aaeCLIP8.8□□□□□ -1
UBXN2B-201ENST00000399598 KRTAP7-1Q8IUC3 87 aa8.76□□□□□ -1.01
UBXN2B-201ENST00000399598 LRBAP50851 2863 aa8.75□□□□□ -1.01
UBXN2B-201ENST00000399598 ZZEF1O43149 2961 aa8.74□□□□□ -1.01
UBXN2B-201ENST00000399598 CFAP47Q6ZTR5 3102 aa8.74□□□□□ -1.01
UBXN2B-201ENST00000399598 A0A0A0MQY5 61 aa8.73□□□□□ -1.01
UBXN2B-201ENST00000399598 ADM2Q7Z4H4 148 aa8.73□□□□□ -1.01
UBXN2B-201ENST00000399598 SPEGQ15772 3267 aa8.73□□□□□ -1.01
UBXN2B-201ENST00000399598 Q6ZRN7 208 aaPredicted RBP8.69□□□□□ -1.02
UBXN2B-201ENST00000399598 WDFY3Q8IZQ1 3526 aa8.69□□□□□ -1.02
UBXN2B-201ENST00000399598 CRYBG3Q68DQ2 2970 aa8.68□□□□□ -1.02
UBXN2B-201ENST00000399598 DCHS2Q6V1P9 2916 aa8.68□□□□□ -1.02
UBXN2B-201ENST00000399598 COL6A3P12111 3177 aa8.66□□□□□ -1.02
UBXN2B-201ENST00000399598 ASB16-AS1Q495Z4 193 aa8.65□□□□□ -1.02
UBXN2B-201ENST00000399598 ZANQ9Y493 2812 aa8.63□□□□□ -1.03
UBXN2B-201ENST00000399598 A8MU10 97 aa8.61□□□□□ -1.03
UBXN2B-201ENST00000399598 KRTAP13-2Q52LG2 175 aa8.6□□□□□ -1.03
UBXN2B-201ENST00000399598 DMDP11532 3685 aa8.59□□□□□ -1.03
UBXN2B-201ENST00000399598 KRTAP13-1Q8IUC0 172 aa8.58□□□□□ -1.04
UBXN2B-201ENST00000399598 TENM3Q9P273 2699 aa8.58□□□□□ -1.04
UBXN2B-201ENST00000399598 A6NN06 94 aa8.57□□□□□ -1.04
UBXN2B-201ENST00000399598 RPS29P62273 56 aaKnown RBP8.53□□□□□ -1.04
UBXN2B-201ENST00000399598 PLAC4Q8WY50 150 aa8.53□□□□□ -1.04
UBXN2B-201ENST00000399598 KRTAP25-1Q3LHN0 102 aa8.49□□□□□ -1.05
UBXN2B-201ENST00000399598 A8MUU9 505 aa8.47□□□□□ -1.05
UBXN2B-201ENST00000399598 NF1P21359 2839 aa8.45□□□□□ -1.06
UBXN2B-201ENST00000399598 FBN2P35556 2912 aa8.41□□□□□ -1.06
UBXN2B-201ENST00000399598 TENM1Q9UKZ4 2725 aa8.36□□□□□ -1.07
UBXN2B-201ENST00000399598 MUC3AQ02505 3323 aa8.36□□□□□ -1.07
UBXN2B-201ENST00000399598 DMXL1Q9Y485 3027 aa8.35□□□□□ -1.07
UBXN2B-201ENST00000399598 SPENQ96T58 3664 aaKnown RBP8.34□□□□□ -1.07
UBXN2B-201ENST00000399598 C20orf166-AS1Q96NR2 134 aa8.32□□□□□ -1.08
UBXN2B-201ENST00000399598 KRTAP16-1A8MUX0 517 aa8.31□□□□□ -1.08
UBXN2B-201ENST00000399598 TNRC18O15417 2968 aaPredicted RBP8.31□□□□□ -1.08
UBXN2B-201ENST00000399598 NDUFAF8A1L188 74 aa8.29□□□□□ -1.08
UBXN2B-201ENST00000399598 LOC400499M0QZD8 3231 aa8.27□□□□□ -1.09
UBXN2B-201ENST00000399598 HRNRQ86YZ3 2850 aaPredicted RBP8.23□□□□□ -1.09
UBXN2B-201ENST00000399598 PKD1L1Q8TDX9 2849 aa8.2□□□□□ -1.1
UBXN2B-201ENST00000399598 KRTAP1-4P0C5Y4 121 aa8.17□□□□□ -1.1
UBXN2B-201ENST00000399598 ASPMQ8IZT6 3477 aa8.16□□□□□ -1.1
UBXN2B-201ENST00000399598 TNP1P09430 55 aa8.15□□□□□ -1.1
UBXN2B-201ENST00000399598 TENM2Q9NT68 2774 aa8.15□□□□□ -1.11
UBXN2B-201ENST00000399598 ZFHX4Q86UP3 3567 aa8.13□□□□□ -1.11
UBXN2B-201ENST00000399598 CELSR1Q9NYQ6 3014 aa8.11□□□□□ -1.11
UBXN2B-201ENST00000399598 TGP01266 2768 aa8.1□□□□□ -1.11
UBXN2B-201ENST00000399598 C10orf95Q9H7T3 257 aa8.08□□□□□ -1.12
UBXN2B-201ENST00000399598 XP32Q5T750 250 aa8.07□□□□□ -1.12
UBXN2B-201ENST00000399598 MXRA5Q9NR99 2828 aa8.05□□□□□ -1.12
UBXN2B-201ENST00000399598 VWFP04275 2813 aa8.05□□□□□ -1.12
UBXN2B-201ENST00000399598 PDZD2O15018 2839 aa8.04□□□□□ -1.12
UBXN2B-201ENST00000399598 H0YAA0 97 aa8.03□□□□□ -1.12
UBXN2B-201ENST00000399598 DCHS1Q96JQ0 3298 aa7.99□□□□□ -1.13
UBXN2B-201ENST00000399598 KRTAP21-3Q3LHN1 58 aa7.98□□□□□ -1.13
UBXN2B-201ENST00000399598 SMG1Q96Q15 3661 aaKnown RBP7.97□□□□□ -1.13
UBXN2B-201ENST00000399598 LAMA5O15230 3695 aa7.96□□□□□ -1.14
UBXN2B-201ENST00000399598 BSNQ9UPA5 3926 aa7.95□□□□□ -1.14
UBXN2B-201ENST00000399598 A0A1B0GVY2 172 aa7.94□□□□□ -1.14
UBXN2B-201ENST00000399598 KRTAP10-8P60410 259 aa7.94□□□□□ -1.14
UBXN2B-201ENST00000399598 SRRM2Q9UQ35 2752 aaKnown RBP7.93□□□□□ -1.14
UBXN2B-201ENST00000399598 PP632Q6XCG6 107 aa7.91□□□□□ -1.14
UBXN2B-201ENST00000399598 P0C880 135 aa7.86□□□□□ -1.15
UBXN2B-201ENST00000399598 TPRXLQ17RH7 258 aa7.83□□□□□ -1.16
UBXN2B-201ENST00000399598 RELNP78509 3460 aa7.83□□□□□ -1.16
UBXN2B-201ENST00000399598 FBN1P35555 2871 aaKnown RBP7.8□□□□□ -1.16
UBXN2B-201ENST00000399598 KRTAP13-3Q3SY46 172 aa7.78□□□□□ -1.16
UBXN2B-201ENST00000399598 KRTAP10-10P60014 251 aa7.72□□□□□ -1.17
UBXN2B-201ENST00000399598 ZFHX3Q15911 3703 aa7.68□□□□□ -1.18
UBXN2B-201ENST00000399598 CSMD1Q96PZ7 3565 aa7.63□□□□□ -1.19
UBXN2B-201ENST00000399598 SVEP1Q4LDE5 3571 aa7.59□□□□□ -1.19
UBXN2B-201ENST00000399598 VPS13CQ709C8 3753 aa7.56□□□□□ -1.2
UBXN2B-201ENST00000399598 FBN3Q75N90 2809 aa7.54□□□□□ -1.2
UBXN2B-201ENST00000399598 KRTAP12-2P59991 146 aa7.53□□□□□ -1.2
UBXN2B-201ENST00000399598 PRO2289Q9P1D8 64 aa7.53□□□□□ -1.2
UBXN2B-201ENST00000399598 CUBNO60494 3623 aa7.53□□□□□ -1.2
UBXN2B-201ENST00000399598 OTOGQ6ZRI0 2925 aa7.45□□□□□ -1.22
UBXN2B-201ENST00000399598 COL7A1Q02388 2944 aa7.44□□□□□ -1.22
UBXN2B-201ENST00000399598 MEGF8Q7Z7M0 2845 aa7.42□□□□□ -1.22
UBXN2B-201ENST00000399598 KRTAP3-1Q9BYR8 98 aa7.41□□□□□ -1.22
UBXN2B-201ENST00000399598 KRTAP12-1P59990 96 aa7.4□□□□□ -1.22
UBXN2B-201ENST00000399598 KRTAP13-4Q3LI77 160 aa7.34□□□□□ -1.23
UBXN2B-201ENST00000399598 NBPF19A0A087WUL8 3843 aa7.34□□□□□ -1.23
UBXN2B-201ENST00000399598 CSMD2Q7Z408 3487 aa7.24□□□□□ -1.25
UBXN2B-201ENST00000399598 KRTAP10-6P60371 365 aaPredicted RBP7.21□□□□□ -1.26
UBXN2B-201ENST00000399598 AKAP9Q99996 3911 aa7.18□□□□□ -1.26
UBXN2B-201ENST00000399598 ZNF469Q96JG9 3925 aaPredicted RBP7.07□□□□□ -1.28
UBXN2B-201ENST00000399598 KRTAP15-1Q3LI76 137 aa7.03□□□□□ -1.28
UBXN2B-201ENST00000399598 TRRAPQ9Y4A5 3859 aa7.03□□□□□ -1.28
UBXN2B-201ENST00000399598 MT1HL1P0DM35 61 aa6.95□□□□□ -1.3
UBXN2B-201ENST00000399598 KRTAP3-2Q9BYR7 98 aa6.94□□□□□ -1.3
UBXN2B-201ENST00000399598 KRTAP3-3Q9BYR6 98 aa6.92□□□□□ -1.3
UBXN2B-201ENST00000399598 ANK3Q12955 4377 aaKnown RBP6.9□□□□□ -1.3
UBXN2B-201ENST00000399598 KRTAP10-4P60372 401 aaPredicted RBP6.75□□□□□ -1.33
UBXN2B-201ENST00000399598 KRTAP10-12P60413 245 aa6.71□□□□□ -1.33
UBXN2B-201ENST00000399598 KRTAP4-5Q9BYR2 181 aa6.71□□□□□ -1.33
UBXN2B-201ENST00000399598 CRCT1Q9UGL9 99 aa6.63□□□□□ -1.35
UBXN2B-201ENST00000399598 INE1O15225 51 aa6.6□□□□□ -1.35
UBXN2B-201ENST00000399598 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
UBXN2B-201ENST00000399598 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
UBXN2B-201ENST00000399598 ANK2Q01484 3957 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms