RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 NBEAQ8NFP9 2946 aa8.77□□□□□ -1.01
ITSN1-209ENST00000399352 ITPR2Q14571 2701 aa8.77□□□□□ -1.01
ITSN1-209ENST00000399352 UTP20O75691 2785 aaKnown RBP8.76□□□□□ -1.01
ITSN1-209ENST00000399352 SZT2Q5T011 3432 aa8.74□□□□□ -1.01
ITSN1-209ENST00000399352 H0YAA0 97 aa8.71□□□□□ -1.01
ITSN1-209ENST00000399352 LRBAP50851 2863 aa8.7□□□□□ -1.02
ITSN1-209ENST00000399352 EYSQ5T1H1 3165 aa8.69□□□□□ -1.02
ITSN1-209ENST00000399352 SPTBN5Q9NRC6 3674 aaKnown RBP8.67□□□□□ -1.02
ITSN1-209ENST00000399352 P0C880 135 aa8.65□□□□□ -1.03
ITSN1-209ENST00000399352 PP632Q6XCG6 107 aa8.62□□□□□ -1.03
ITSN1-209ENST00000399352 DNAH14Q0VDD8 3507 aa8.6□□□□□ -1.03
ITSN1-209ENST00000399352 KRTAP10-8P60410 259 aa8.59□□□□□ -1.03
ITSN1-209ENST00000399352 ATMQ13315 3056 aa8.59□□□□□ -1.03
ITSN1-209ENST00000399352 CELSR2Q9HCU4 2923 aa8.57□□□□□ -1.04
ITSN1-209ENST00000399352 LAMA1P25391 3075 aa8.53□□□□□ -1.04
ITSN1-209ENST00000399352 FLNCQ14315 2725 aa8.53□□□□□ -1.04
ITSN1-209ENST00000399352 ADGRG4Q8IZF6 3080 aa8.52□□□□□ -1.04
ITSN1-209ENST00000399352 FRYLO94915 3013 aa8.52□□□□□ -1.05
ITSN1-209ENST00000399352 COL12A1Q99715 3063 aa8.52□□□□□ -1.05
ITSN1-209ENST00000399352 NIPBLQ6KC79 2804 aaeCLIP8.5□□□□□ -1.05
ITSN1-209ENST00000399352 USP34Q70CQ2 3546 aa8.49□□□□□ -1.05
ITSN1-209ENST00000399352 BOD1L1Q8NFC6 3051 aa8.47□□□□□ -1.05
ITSN1-209ENST00000399352 CRYBG3Q68DQ2 2970 aa8.46□□□□□ -1.06
ITSN1-209ENST00000399352 KRTAP1-4P0C5Y4 121 aa8.45□□□□□ -1.06
ITSN1-209ENST00000399352 CFAP47Q6ZTR5 3102 aa8.45□□□□□ -1.06
ITSN1-209ENST00000399352 XP32Q5T750 250 aa8.45□□□□□ -1.06
ITSN1-209ENST00000399352 A0A1B0GVY2 172 aa8.45□□□□□ -1.06
ITSN1-209ENST00000399352 TNRC18O15417 2968 aaPredicted RBP8.44□□□□□ -1.06
ITSN1-209ENST00000399352 MYO15AQ9UKN7 3530 aa8.43□□□□□ -1.06
ITSN1-209ENST00000399352 TENM4Q6N022 2769 aa8.43□□□□□ -1.06
ITSN1-209ENST00000399352 VCANP13611 3396 aa8.43□□□□□ -1.06
ITSN1-209ENST00000399352 ZZEF1O43149 2961 aa8.41□□□□□ -1.06
ITSN1-209ENST00000399352 SPEGQ15772 3267 aa8.4□□□□□ -1.06
ITSN1-209ENST00000399352 DCHS2Q6V1P9 2916 aa8.4□□□□□ -1.07
ITSN1-209ENST00000399352 COL6A3P12111 3177 aa8.36□□□□□ -1.07
ITSN1-209ENST00000399352 MUC3AQ02505 3323 aa8.35□□□□□ -1.07
ITSN1-209ENST00000399352 TENM3Q9P273 2699 aa8.35□□□□□ -1.07
ITSN1-209ENST00000399352 TGP01266 2768 aa8.28□□□□□ -1.08
ITSN1-209ENST00000399352 DMDP11532 3685 aa8.27□□□□□ -1.09
ITSN1-209ENST00000399352 ZANQ9Y493 2812 aa8.23□□□□□ -1.09
ITSN1-209ENST00000399352 NF1P21359 2839 aa8.22□□□□□ -1.09
ITSN1-209ENST00000399352 WDFY3Q8IZQ1 3526 aa8.22□□□□□ -1.09
ITSN1-209ENST00000399352 TENM1Q9UKZ4 2725 aa8.18□□□□□ -1.1
ITSN1-209ENST00000399352 KRTAP10-10P60014 251 aa8.16□□□□□ -1.1
ITSN1-209ENST00000399352 KRTAP13-3Q3SY46 172 aa8.15□□□□□ -1.11
ITSN1-209ENST00000399352 KRTAP12-2P59991 146 aa8.14□□□□□ -1.11
ITSN1-209ENST00000399352 TPRXLQ17RH7 258 aa8.12□□□□□ -1.11
ITSN1-209ENST00000399352 FBN2P35556 2912 aa8.11□□□□□ -1.11
ITSN1-209ENST00000399352 DMXL1Q9Y485 3027 aa8.03□□□□□ -1.12
ITSN1-209ENST00000399352 PRO2289Q9P1D8 64 aa8.03□□□□□ -1.12
ITSN1-209ENST00000399352 PDZD2O15018 2839 aa7.98□□□□□ -1.13
ITSN1-209ENST00000399352 KRTAP12-1P59990 96 aa7.95□□□□□ -1.14
ITSN1-209ENST00000399352 TENM2Q9NT68 2774 aa7.94□□□□□ -1.14
ITSN1-209ENST00000399352 KRTAP13-4Q3LI77 160 aa7.93□□□□□ -1.14
ITSN1-209ENST00000399352 HRNRQ86YZ3 2850 aaPredicted RBP7.93□□□□□ -1.14
ITSN1-209ENST00000399352 CELSR1Q9NYQ6 3014 aa7.91□□□□□ -1.14
ITSN1-209ENST00000399352 ASPMQ8IZT6 3477 aa7.9□□□□□ -1.15
ITSN1-209ENST00000399352 LOC400499M0QZD8 3231 aa7.89□□□□□ -1.15
ITSN1-209ENST00000399352 PKD1L1Q8TDX9 2849 aa7.88□□□□□ -1.15
ITSN1-209ENST00000399352 ZFHX4Q86UP3 3567 aa7.87□□□□□ -1.15
ITSN1-209ENST00000399352 VWFP04275 2813 aa7.83□□□□□ -1.16
ITSN1-209ENST00000399352 SPENQ96T58 3664 aaKnown RBP7.82□□□□□ -1.16
ITSN1-209ENST00000399352 KRTAP3-1Q9BYR8 98 aa7.81□□□□□ -1.16
ITSN1-209ENST00000399352 LAMA5O15230 3695 aa7.78□□□□□ -1.16
ITSN1-209ENST00000399352 KRTAP21-3Q3LHN1 58 aa7.77□□□□□ -1.17
ITSN1-209ENST00000399352 MXRA5Q9NR99 2828 aa7.71□□□□□ -1.17
ITSN1-209ENST00000399352 DCHS1Q96JQ0 3298 aa7.69□□□□□ -1.18
ITSN1-209ENST00000399352 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
ITSN1-209ENST00000399352 KRTAP10-6P60371 365 aaPredicted RBP7.64□□□□□ -1.19
ITSN1-209ENST00000399352 BSNQ9UPA5 3926 aa7.63□□□□□ -1.19
ITSN1-209ENST00000399352 SRRM2Q9UQ35 2752 aaKnown RBP7.62□□□□□ -1.19
ITSN1-209ENST00000399352 SMG1Q96Q15 3661 aaKnown RBP7.54□□□□□ -1.2
ITSN1-209ENST00000399352 RELNP78509 3460 aa7.44□□□□□ -1.22
ITSN1-209ENST00000399352 INE1O15225 51 aa7.43□□□□□ -1.22
ITSN1-209ENST00000399352 FBN3Q75N90 2809 aa7.42□□□□□ -1.22
ITSN1-209ENST00000399352 MEGF8Q7Z7M0 2845 aa7.38□□□□□ -1.23
ITSN1-209ENST00000399352 FBN1P35555 2871 aaKnown RBP7.38□□□□□ -1.23
ITSN1-209ENST00000399352 KRTAP3-2Q9BYR7 98 aa7.32□□□□□ -1.24
ITSN1-209ENST00000399352 CSMD1Q96PZ7 3565 aa7.29□□□□□ -1.24
ITSN1-209ENST00000399352 COL7A1Q02388 2944 aa7.27□□□□□ -1.25
ITSN1-209ENST00000399352 KRTAP3-3Q9BYR6 98 aa7.26□□□□□ -1.25
ITSN1-209ENST00000399352 CRCT1Q9UGL9 99 aa7.22□□□□□ -1.25
ITSN1-209ENST00000399352 SVEP1Q4LDE5 3571 aa7.2□□□□□ -1.26
ITSN1-209ENST00000399352 KRTAP10-12P60413 245 aa7.17□□□□□ -1.26
ITSN1-209ENST00000399352 VPS13CQ709C8 3753 aa7.16□□□□□ -1.26
ITSN1-209ENST00000399352 ZFHX3Q15911 3703 aa7.1□□□□□ -1.27
ITSN1-209ENST00000399352 CUBNO60494 3623 aa7.08□□□□□ -1.28
ITSN1-209ENST00000399352 NBPF19A0A087WUL8 3843 aa7.05□□□□□ -1.28
ITSN1-209ENST00000399352 KRTAP12-3P60328 96 aa7.04□□□□□ -1.28
ITSN1-209ENST00000399352 CSMD2Q7Z408 3487 aa7.04□□□□□ -1.28
ITSN1-209ENST00000399352 MT1HL1P0DM35 61 aa7.01□□□□□ -1.29
ITSN1-209ENST00000399352 OTOGQ6ZRI0 2925 aa7□□□□□ -1.29
ITSN1-209ENST00000399352 LCE3AQ5TA76 89 aa6.98□□□□□ -1.29
ITSN1-209ENST00000399352 LORP23490 312 aaPredicted RBP6.88□□□□□ -1.31
ITSN1-209ENST00000399352 KRTAP23-1A1A580 65 aa6.87□□□□□ -1.31
ITSN1-209ENST00000399352 ZNF469Q96JG9 3925 aaPredicted RBP6.87□□□□□ -1.31
ITSN1-209ENST00000399352 KRTAP10-5P60370 271 aa6.77□□□□□ -1.33
ITSN1-209ENST00000399352 TRRAPQ9Y4A5 3859 aa6.75□□□□□ -1.33
ITSN1-209ENST00000399352 KRTAP10-4P60372 401 aaPredicted RBP6.75□□□□□ -1.33
ITSN1-209ENST00000399352 ANK3Q12955 4377 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms