RNA–Protein interactions for RNA: ENST00000398888.6

USP19-202, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP19, Length 4,559 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-202ENST00000398888 KRTAP4-16G5E9R7 235 aaPredicted RBP7.87□□□□□ -1.15
USP19-202ENST00000398888 LINC00304Q8N9R0 145 aa7.86□□□□□ -1.15
USP19-202ENST00000398888 APCP25054 2843 aa7.85□□□□□ -1.15
USP19-202ENST00000398888 CELSR2Q9HCU4 2923 aa7.85□□□□□ -1.15
USP19-202ENST00000398888 PANO1I0J062 215 aa7.85□□□□□ -1.15
USP19-202ENST00000398888 SEC61BP60468 96 aaKnown RBP7.85□□□□□ -1.15
USP19-202ENST00000398888 ZANQ9Y493 2812 aa7.83□□□□□ -1.16
USP19-202ENST00000398888 ASH1LQ9NR48 2969 aaKnown RBP7.83□□□□□ -1.16
USP19-202ENST00000398888 KRTAP11-1Q8IUC1 163 aa7.81□□□□□ -1.16
USP19-202ENST00000398888 NIPBLQ6KC79 2804 aaeCLIP7.79□□□□□ -1.16
USP19-202ENST00000398888 SMG1Q96Q15 3661 aaKnown RBP7.79□□□□□ -1.16
USP19-202ENST00000398888 DCHS2Q6V1P9 2916 aa7.79□□□□□ -1.16
USP19-202ENST00000398888 NOTCH2NLQ7Z3S9 236 aa7.78□□□□□ -1.16
USP19-202ENST00000398888 CAMK2N1Q7Z7J9 78 aa7.77□□□□□ -1.17
USP19-202ENST00000398888 A0A087WTM6 91 aa7.76□□□□□ -1.17
USP19-202ENST00000398888 WWC2-AS2Q96NR7 200 aa7.73□□□□□ -1.17
USP19-202ENST00000398888 CSMD1Q96PZ7 3565 aa7.73□□□□□ -1.17
USP19-202ENST00000398888 NSD1Q96L73 2696 aaPredicted RBP7.72□□□□□ -1.17
USP19-202ENST00000398888 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.72□□□□□ -1.17
USP19-202ENST00000398888 PLAC8Q9NZF1 115 aa7.7□□□□□ -1.18
USP19-202ENST00000398888 KMT2BQ9UMN6 2715 aaPredicted RBP7.66□□□□□ -1.18
USP19-202ENST00000398888 FBN2P35556 2912 aa7.66□□□□□ -1.18
USP19-202ENST00000398888 TENM4Q6N022 2769 aa7.65□□□□□ -1.19
USP19-202ENST00000398888 NF1P21359 2839 aa7.64□□□□□ -1.19
USP19-202ENST00000398888 MXRA5Q9NR99 2828 aa7.63□□□□□ -1.19
USP19-202ENST00000398888 S4R3F8 94 aa7.62□□□□□ -1.19
USP19-202ENST00000398888 KRTAP1-5Q9BYS1 174 aa7.61□□□□□ -1.19
USP19-202ENST00000398888 KRTAP7-1Q8IUC3 87 aa7.6□□□□□ -1.19
USP19-202ENST00000398888 COX6B2Q6YFQ2 88 aa7.6□□□□□ -1.19
USP19-202ENST00000398888 R4GN34 69 aa7.57□□□□□ -1.2
USP19-202ENST00000398888 Q6ZSA8 131 aa7.56□□□□□ -1.2
USP19-202ENST00000398888 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
USP19-202ENST00000398888 CELSR1Q9NYQ6 3014 aa7.56□□□□□ -1.2
USP19-202ENST00000398888 PLAC4Q8WY50 150 aa7.54□□□□□ -1.2
USP19-202ENST00000398888 SVEP1Q4LDE5 3571 aa7.53□□□□□ -1.2
USP19-202ENST00000398888 H0YAA0 97 aa7.48□□□□□ -1.21
USP19-202ENST00000398888 M0QZ58 72 aa7.46□□□□□ -1.21
USP19-202ENST00000398888 SMR3BP02814 79 aaPredicted RBP7.46□□□□□ -1.22
USP19-202ENST00000398888 SPENQ96T58 3664 aaKnown RBP7.46□□□□□ -1.22
USP19-202ENST00000398888 ZFHX3Q15911 3703 aa7.45□□□□□ -1.22
USP19-202ENST00000398888 P0C880 135 aa7.41□□□□□ -1.22
USP19-202ENST00000398888 NBPF19A0A087WUL8 3843 aa7.41□□□□□ -1.22
USP19-202ENST00000398888 KRTAP13-1Q8IUC0 172 aa7.4□□□□□ -1.22
USP19-202ENST00000398888 OTOGQ6ZRI0 2925 aa7.38□□□□□ -1.23
USP19-202ENST00000398888 BSNQ9UPA5 3926 aa7.34□□□□□ -1.23
USP19-202ENST00000398888 CSMD2Q7Z408 3487 aa7.32□□□□□ -1.24
USP19-202ENST00000398888 Q6ZRN7 208 aaPredicted RBP7.31□□□□□ -1.24
USP19-202ENST00000398888 PDZD2O15018 2839 aa7.3□□□□□ -1.24
USP19-202ENST00000398888 FBN1P35555 2871 aaKnown RBP7.23□□□□□ -1.25
USP19-202ENST00000398888 CUBNO60494 3623 aa7.23□□□□□ -1.25
USP19-202ENST00000398888 TENM1Q9UKZ4 2725 aa7.22□□□□□ -1.25
USP19-202ENST00000398888 VWFP04275 2813 aa7.16□□□□□ -1.26
USP19-202ENST00000398888 TENM3Q9P273 2699 aa7.15□□□□□ -1.26
USP19-202ENST00000398888 KRTAP10-2P60368 255 aa7.15□□□□□ -1.27
USP19-202ENST00000398888 PKD1L1Q8TDX9 2849 aa7.14□□□□□ -1.27
USP19-202ENST00000398888 KRTAP10-1P60331 282 aa7.14□□□□□ -1.27
USP19-202ENST00000398888 KRTAP10-8P60410 259 aa7.13□□□□□ -1.27
USP19-202ENST00000398888 J3QL48 77 aa7.13□□□□□ -1.27
USP19-202ENST00000398888 PP632Q6XCG6 107 aa7.11□□□□□ -1.27
USP19-202ENST00000398888 KRTAP13-2Q52LG2 175 aa7.1□□□□□ -1.27
USP19-202ENST00000398888 TPRXLQ17RH7 258 aa7.09□□□□□ -1.27
USP19-202ENST00000398888 RPS29P62273 56 aaKnown RBP7.06□□□□□ -1.28
USP19-202ENST00000398888 TGP01266 2768 aa7.06□□□□□ -1.28
USP19-202ENST00000398888 KRTAP13-3Q3SY46 172 aa7.03□□□□□ -1.28
USP19-202ENST00000398888 KRTAP21-3Q3LHN1 58 aa7.01□□□□□ -1.29
USP19-202ENST00000398888 TNP1P09430 55 aa7□□□□□ -1.29
USP19-202ENST00000398888 VPS13CQ709C8 3753 aa6.97□□□□□ -1.29
USP19-202ENST00000398888 M0R2T5 61 aa6.97□□□□□ -1.29
USP19-202ENST00000398888 TENM2Q9NT68 2774 aa6.95□□□□□ -1.3
USP19-202ENST00000398888 KRTAP15-1Q3LI76 137 aa6.91□□□□□ -1.3
USP19-202ENST00000398888 SRRM2Q9UQ35 2752 aaKnown RBP6.86□□□□□ -1.31
USP19-202ENST00000398888 KRTAP1-4P0C5Y4 121 aa6.86□□□□□ -1.31
USP19-202ENST00000398888 ANK3Q12955 4377 aaKnown RBP6.84□□□□□ -1.31
USP19-202ENST00000398888 KRTAP12-2P59991 146 aa6.81□□□□□ -1.32
USP19-202ENST00000398888 TRRAPQ9Y4A5 3859 aa6.8□□□□□ -1.32
USP19-202ENST00000398888 ZNF469Q96JG9 3925 aaPredicted RBP6.72□□□□□ -1.33
USP19-202ENST00000398888 Q5VSD8 79 aa6.69□□□□□ -1.34
USP19-202ENST00000398888 KRTAP12-1P59990 96 aa6.68□□□□□ -1.34
USP19-202ENST00000398888 FBN3Q75N90 2809 aa6.67□□□□□ -1.34
USP19-202ENST00000398888 AKAP9Q99996 3911 aa6.66□□□□□ -1.34
USP19-202ENST00000398888 PRO2289Q9P1D8 64 aa6.6□□□□□ -1.35
USP19-202ENST00000398888 KRTAP13-4Q3LI77 160 aa6.59□□□□□ -1.36
USP19-202ENST00000398888 KRTAP3-1Q9BYR8 98 aa6.55□□□□□ -1.36
USP19-202ENST00000398888 XP32Q5T750 250 aa6.55□□□□□ -1.36
USP19-202ENST00000398888 INE1O15225 51 aa6.54□□□□□ -1.36
USP19-202ENST00000398888 COL7A1Q02388 2944 aa6.53□□□□□ -1.36
USP19-202ENST00000398888 KRTAP10-6P60371 365 aaPredicted RBP6.5□□□□□ -1.37
USP19-202ENST00000398888 MEGF8Q7Z7M0 2845 aa6.44□□□□□ -1.38
USP19-202ENST00000398888 DNHD1Q96M86 4753 aa6.38□□□□□ -1.39
USP19-202ENST00000398888 HUWE1Q7Z6Z7 4374 aaKnown RBP6.35□□□□□ -1.39
USP19-202ENST00000398888 CSMD3Q7Z407 3707 aa6.3□□□□□ -1.4
USP19-202ENST00000398888 A0A1B0GVY2 172 aa6.24□□□□□ -1.41
USP19-202ENST00000398888 KRTAP3-2Q9BYR7 98 aa6.23□□□□□ -1.41
USP19-202ENST00000398888 DNAH10Q8IVF4 4471 aa6.17□□□□□ -1.42
USP19-202ENST00000398888 KRTAP3-3Q9BYR6 98 aa6.1□□□□□ -1.43
USP19-202ENST00000398888 DNAH9Q9NYC9 4486 aa6.08□□□□□ -1.44
USP19-202ENST00000398888 PLECQ15149 4684 aaKnown RBP6.05□□□□□ -1.44
USP19-202ENST00000398888 DNAH1Q9P2D7 4330 aa6.03□□□□□ -1.44
USP19-202ENST00000398888 KRTAP10-4P60372 401 aaPredicted RBP5.99□□□□□ -1.45
USP19-202ENST00000398888 PRKDCP78527 4128 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms