RNA–Protein interactions for RNA: ENST00000398532.8

MSL1-202, Transcript of male specific lethal 1 homolog, humanhuman

TSL 1 (best) BASIC

Gene MSL1, Length 4,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-202ENST00000398532 LCA10Q71F78 164 aa10.79□□□□□ -0.68
MSL1-202ENST00000398532 SPINT4Q6UDR6 99 aa10.76□□□□□ -0.69
MSL1-202ENST00000398532 Q6ZRN7 208 aaPredicted RBP10.76□□□□□ -0.69
MSL1-202ENST00000398532 RBM12B-AS1Q9P1G2 102 aa10.75□□□□□ -0.69
MSL1-202ENST00000398532 TENM3Q9P273 2699 aa10.75□□□□□ -0.69
MSL1-202ENST00000398532 A0A087X002 238 aa10.73□□□□□ -0.69
MSL1-202ENST00000398532 NOTCH2NLQ7Z3S9 236 aa10.73□□□□□ -0.69
MSL1-202ENST00000398532 SPINK7P58062 85 aa10.72□□□□□ -0.69
MSL1-202ENST00000398532 A0A1B0GU33 70 aa10.72□□□□□ -0.69
MSL1-202ENST00000398532 CRIPTQ9P021 101 aa10.7□□□□□ -0.7
MSL1-202ENST00000398532 LINC01554Q52M75 96 aa10.7□□□□□ -0.7
MSL1-202ENST00000398532 Q6ZSA8 131 aa10.65□□□□□ -0.71
MSL1-202ENST00000398532 TENM1Q9UKZ4 2725 aa10.64□□□□□ -0.71
MSL1-202ENST00000398532 CSMD1Q96PZ7 3565 aa10.62□□□□□ -0.71
MSL1-202ENST00000398532 DMAC1Q96GE9 116 aa10.62□□□□□ -0.71
MSL1-202ENST00000398532 SMG1Q96Q15 3661 aaKnown RBP10.6□□□□□ -0.71
MSL1-202ENST00000398532 KRTAP13-1Q8IUC0 172 aa10.59□□□□□ -0.71
MSL1-202ENST00000398532 LCE6AA0A183 80 aa10.58□□□□□ -0.72
MSL1-202ENST00000398532 PRAC1Q96KF2 57 aa10.56□□□□□ -0.72
MSL1-202ENST00000398532 PDZD2O15018 2839 aa10.55□□□□□ -0.72
MSL1-202ENST00000398532 FBN1P35555 2871 aaKnown RBP10.54□□□□□ -0.72
MSL1-202ENST00000398532 PKD1L1Q8TDX9 2849 aa10.53□□□□□ -0.72
MSL1-202ENST00000398532 VWFP04275 2813 aa10.52□□□□□ -0.72
MSL1-202ENST00000398532 Q5VSD8 79 aa10.49□□□□□ -0.73
MSL1-202ENST00000398532 ASB16-AS1Q495Z4 193 aa10.45□□□□□ -0.74
MSL1-202ENST00000398532 KRTAP13-2Q52LG2 175 aa10.45□□□□□ -0.74
MSL1-202ENST00000398532 CSAG1Q6PB30 78 aa10.43□□□□□ -0.74
MSL1-202ENST00000398532 S4R3F8 94 aa10.43□□□□□ -0.74
MSL1-202ENST00000398532 SVEP1Q4LDE5 3571 aa10.41□□□□□ -0.74
MSL1-202ENST00000398532 OTOGQ6ZRI0 2925 aa10.41□□□□□ -0.74
MSL1-202ENST00000398532 CUBNO60494 3623 aa10.4□□□□□ -0.74
MSL1-202ENST00000398532 TGP01266 2768 aa10.37□□□□□ -0.75
MSL1-202ENST00000398532 TENM2Q9NT68 2774 aa10.32□□□□□ -0.76
MSL1-202ENST00000398532 CAMK2N1Q7Z7J9 78 aa10.28□□□□□ -0.76
MSL1-202ENST00000398532 H1FX-AS1Q4G0G2 97 aa10.26□□□□□ -0.77
MSL1-202ENST00000398532 A8MU10 97 aa10.26□□□□□ -0.77
MSL1-202ENST00000398532 RPL37P61927 97 aaKnown RBP10.24□□□□□ -0.77
MSL1-202ENST00000398532 SPATA8Q6RVD6 105 aa10.24□□□□□ -0.77
MSL1-202ENST00000398532 RPS29P62273 56 aaKnown RBP10.22□□□□□ -0.77
MSL1-202ENST00000398532 R4GN34 69 aa10.22□□□□□ -0.77
MSL1-202ENST00000398532 NBPF19A0A087WUL8 3843 aa10.21□□□□□ -0.77
MSL1-202ENST00000398532 SEC61BP60468 96 aaKnown RBP10.19□□□□□ -0.78
MSL1-202ENST00000398532 ZFHX3Q15911 3703 aa10.19□□□□□ -0.78
MSL1-202ENST00000398532 CSMD2Q7Z408 3487 aa10.15□□□□□ -0.79
MSL1-202ENST00000398532 M0R2T5 61 aa10.12□□□□□ -0.79
MSL1-202ENST00000398532 SPENQ96T58 3664 aaKnown RBP10.11□□□□□ -0.79
MSL1-202ENST00000398532 A6NN06 94 aa10.1□□□□□ -0.79
MSL1-202ENST00000398532 ROMO1P60602 79 aa10.08□□□□□ -0.8
MSL1-202ENST00000398532 M0QZ58 72 aa10.06□□□□□ -0.8
MSL1-202ENST00000398532 ADM2Q7Z4H4 148 aa10.06□□□□□ -0.8
MSL1-202ENST00000398532 KRTAP1-4P0C5Y4 121 aa10.05□□□□□ -0.8
MSL1-202ENST00000398532 LUZP6Q538Z0 58 aa10.01□□□□□ -0.81
MSL1-202ENST00000398532 SRRM2Q9UQ35 2752 aaKnown RBP9.99□□□□□ -0.81
MSL1-202ENST00000398532 A8MUU9 505 aa9.97□□□□□ -0.81
MSL1-202ENST00000398532 C20orf166-AS1Q96NR2 134 aa9.93□□□□□ -0.82
MSL1-202ENST00000398532 KRTAP21-3Q3LHN1 58 aa9.93□□□□□ -0.82
MSL1-202ENST00000398532 FBN3Q75N90 2809 aa9.86□□□□□ -0.83
MSL1-202ENST00000398532 H3BS24 57 aa9.84□□□□□ -0.83
MSL1-202ENST00000398532 BSNQ9UPA5 3926 aa9.82□□□□□ -0.84
MSL1-202ENST00000398532 TRRAPQ9Y4A5 3859 aa9.8□□□□□ -0.84
MSL1-202ENST00000398532 KRTAP16-1A8MUX0 517 aa9.79□□□□□ -0.84
MSL1-202ENST00000398532 KRTAP25-1Q3LHN0 102 aa9.77□□□□□ -0.84
MSL1-202ENST00000398532 ANK3Q12955 4377 aaKnown RBP9.67□□□□□ -0.86
MSL1-202ENST00000398532 XP32Q5T750 250 aa9.67□□□□□ -0.86
MSL1-202ENST00000398532 COL7A1Q02388 2944 aa9.62□□□□□ -0.87
MSL1-202ENST00000398532 KRTAP13-3Q3SY46 172 aa9.62□□□□□ -0.87
MSL1-202ENST00000398532 MEGF8Q7Z7M0 2845 aa9.61□□□□□ -0.87
MSL1-202ENST00000398532 H0YAA0 97 aa9.57□□□□□ -0.88
MSL1-202ENST00000398532 PLAC4Q8WY50 150 aa9.56□□□□□ -0.88
MSL1-202ENST00000398532 VPS13CQ709C8 3753 aa9.44□□□□□ -0.9
MSL1-202ENST00000398532 A0A0A0MQY5 61 aa9.44□□□□□ -0.9
MSL1-202ENST00000398532 A0A1B0GVY2 172 aa9.39□□□□□ -0.91
MSL1-202ENST00000398532 TPRXLQ17RH7 258 aa9.39□□□□□ -0.91
MSL1-202ENST00000398532 C10orf95Q9H7T3 257 aa9.38□□□□□ -0.91
MSL1-202ENST00000398532 P0C880 135 aa9.37□□□□□ -0.91
MSL1-202ENST00000398532 KRTAP10-8P60410 259 aa9.36□□□□□ -0.91
MSL1-202ENST00000398532 NDUFAF8A1L188 74 aa9.32□□□□□ -0.92
MSL1-202ENST00000398532 TNP1P09430 55 aa9.25□□□□□ -0.93
MSL1-202ENST00000398532 ZNF469Q96JG9 3925 aaPredicted RBP9.19□□□□□ -0.94
MSL1-202ENST00000398532 KRTAP3-1Q9BYR8 98 aa9.15□□□□□ -0.94
MSL1-202ENST00000398532 CSMD3Q7Z407 3707 aa9.03□□□□□ -0.96
MSL1-202ENST00000398532 PP632Q6XCG6 107 aa9.02□□□□□ -0.97
MSL1-202ENST00000398532 HUWE1Q7Z6Z7 4374 aaKnown RBP8.98□□□□□ -0.97
MSL1-202ENST00000398532 KRTAP12-2P59991 146 aa8.96□□□□□ -0.98
MSL1-202ENST00000398532 KRTAP10-10P60014 251 aa8.9□□□□□ -0.98
MSL1-202ENST00000398532 KRTAP12-1P59990 96 aa8.85□□□□□ -0.99
MSL1-202ENST00000398532 KRTAP10-6P60371 365 aaPredicted RBP8.82□□□□□ -1
MSL1-202ENST00000398532 KRTAP13-4Q3LI77 160 aa8.81□□□□□ -1
MSL1-202ENST00000398532 AKAP9Q99996 3911 aa8.8□□□□□ -1
MSL1-202ENST00000398532 MT1HL1P0DM35 61 aa8.73□□□□□ -1.01
MSL1-202ENST00000398532 KRTAP10-4P60372 401 aaPredicted RBP8.72□□□□□ -1.01
MSL1-202ENST00000398532 DNAH9Q9NYC9 4486 aa8.64□□□□□ -1.03
MSL1-202ENST00000398532 KRTAP3-3Q9BYR6 98 aa8.61□□□□□ -1.03
MSL1-202ENST00000398532 KRTAP3-2Q9BYR7 98 aa8.57□□□□□ -1.04
MSL1-202ENST00000398532 PLECQ15149 4684 aaKnown RBP8.54□□□□□ -1.04
MSL1-202ENST00000398532 PRO2289Q9P1D8 64 aa8.53□□□□□ -1.04
MSL1-202ENST00000398532 DNAH11Q96DT5 4516 aa8.49□□□□□ -1.05
MSL1-202ENST00000398532 DNAH5Q8TE73 4624 aa8.49□□□□□ -1.05
MSL1-202ENST00000398532 DNHD1Q96M86 4753 aa8.48□□□□□ -1.05
MSL1-202ENST00000398532 KRTAP4-5Q9BYR2 181 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms