RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 KRTAP11-1Q8IUC1 163 aa3.77□□□□□ -1.81
SMCO1-201ENST00000397537 IGKV3-7A0A075B6H7 116 aa3.77□□□□□ -1.81
SMCO1-201ENST00000397537 CCL18P55774 89 aa3.77□□□□□ -1.81
SMCO1-201ENST00000397537 STARD9Q9P2P6 4700 aa3.76□□□□□ -1.81
SMCO1-201ENST00000397537 TNCP24821 2201 aa3.76□□□□□ -1.81
SMCO1-201ENST00000397537 K7EIL1 84 aa3.76□□□□□ -1.81
SMCO1-201ENST00000397537 COX7BP24311 80 aa3.75□□□□□ -1.81
SMCO1-201ENST00000397537 DNAH10Q8IVF4 4471 aa3.74□□□□□ -1.81
SMCO1-201ENST00000397537 IGKV2-40A0A087WW87 121 aaPredicted RBP3.73□□□□□ -1.81
SMCO1-201ENST00000397537 IGKV2D-40P01614 121 aaPredicted RBP3.73□□□□□ -1.81
SMCO1-201ENST00000397537 SPRR4Q96PI1 79 aa3.73□□□□□ -1.81
SMCO1-201ENST00000397537 IGKV2-28A0A075B6P5 120 aa3.72□□□□□ -1.81
SMCO1-201ENST00000397537 IGKV2D-28P01615 120 aa3.72□□□□□ -1.81
SMCO1-201ENST00000397537 RNASE3P12724 160 aaKnown RBP3.72□□□□□ -1.81
SMCO1-201ENST00000397537 CCL3L1P16619 93 aa3.72□□□□□ -1.81
SMCO1-201ENST00000397537 TMEM167AQ8TBQ9 72 aa3.72□□□□□ -1.81
SMCO1-201ENST00000397537 TRBV6-4A0A1B0GX49 114 aa3.72□□□□□ -1.81
SMCO1-201ENST00000397537 IGKV2D-24A0A075B6R9 120 aa3.71□□□□□ -1.82
SMCO1-201ENST00000397537 LINC00158P58513 81 aa3.71□□□□□ -1.82
SMCO1-201ENST00000397537 ALMS1Q8TCU4 4167 aa3.7□□□□□ -1.82
SMCO1-201ENST00000397537 HUWE1Q7Z6Z7 4374 aaKnown RBP3.7□□□□□ -1.82
SMCO1-201ENST00000397537 LINC00959A0A1B0GUT2 108 aa3.7□□□□□ -1.82
SMCO1-201ENST00000397537 MRPL33O75394 65 aaKnown RBP3.7□□□□□ -1.82
SMCO1-201ENST00000397537 C4orf3Q8WVX3 66 aa3.7□□□□□ -1.82
SMCO1-201ENST00000397537 WNK2Q9Y3S1 2297 aa3.7□□□□□ -1.82
SMCO1-201ENST00000397537 IGKV3OR2-268A0A0C4DH90 116 aa3.7□□□□□ -1.82
SMCO1-201ENST00000397537 RPL39P5Q59GN2 51 aa3.7□□□□□ -1.82
SMCO1-201ENST00000397537 WT1-ASQ06250 92 aa3.69□□□□□ -1.82
SMCO1-201ENST00000397537 LINC00575Q6W349 94 aa3.68□□□□□ -1.82
SMCO1-201ENST00000397537 LEAP2Q969E1 77 aa3.68□□□□□ -1.82
SMCO1-201ENST00000397537 KRTAP1-4P0C5Y4 121 aa3.67□□□□□ -1.82
SMCO1-201ENST00000397537 CDKN2A-AS1Q9UH64 79 aa3.67□□□□□ -1.82
SMCO1-201ENST00000397537 LINC00315P59091 139 aa3.67□□□□□ -1.82
SMCO1-201ENST00000397537 Q6ZQY7 126 aa3.67□□□□□ -1.82
SMCO1-201ENST00000397537 M0R2N4 97 aa3.66□□□□□ -1.82
SMCO1-201ENST00000397537 PRB3Q04118 309 aaPredicted RBP3.66□□□□□ -1.82
SMCO1-201ENST00000397537 ANAPC11Q9NYG5 84 aa3.66□□□□□ -1.82
SMCO1-201ENST00000397537 COX17Q14061 63 aa3.65□□□□□ -1.82
SMCO1-201ENST00000397537 DYNC1H1Q14204 4646 aaKnown RBP3.65□□□□□ -1.82
SMCO1-201ENST00000397537 DMBT1Q9UGM3 2413 aaPredicted RBP3.65□□□□□ -1.82
SMCO1-201ENST00000397537 A0A1W2PNN7 141 aa3.65□□□□□ -1.83
SMCO1-201ENST00000397537 KRTAP10-11P60412 298 aa3.65□□□□□ -1.83
SMCO1-201ENST00000397537 DEFB131BA0A096LNP1 70 aa3.64□□□□□ -1.83
SMCO1-201ENST00000397537 LYNX1G3V0Z9 82 aa3.63□□□□□ -1.83
SMCO1-201ENST00000397537 M0QY20 66 aa3.63□□□□□ -1.83
SMCO1-201ENST00000397537 LYNX1P0DP58 116 aa3.63□□□□□ -1.83
SMCO1-201ENST00000397537 KRTAP13-2Q52LG2 175 aa3.63□□□□□ -1.83
SMCO1-201ENST00000397537 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
SMCO1-201ENST00000397537 A0A1B0GU69 56 aa3.63□□□□□ -1.83
SMCO1-201ENST00000397537 I3L2K1 104 aa3.63□□□□□ -1.83
SMCO1-201ENST00000397537 A0A087WTM6 91 aa3.62□□□□□ -1.83
SMCO1-201ENST00000397537 TRGV1A0A0A0MS02 117 aa3.62□□□□□ -1.83
SMCO1-201ENST00000397537 DNAH11Q96DT5 4516 aa3.61□□□□□ -1.83
SMCO1-201ENST00000397537 HSPG2P98160 4391 aa3.61□□□□□ -1.83
SMCO1-201ENST00000397537 C10orf55Q5SWW7 151 aa3.6□□□□□ -1.83
SMCO1-201ENST00000397537 Q8IZM0 81 aa3.6□□□□□ -1.83
SMCO1-201ENST00000397537 PKHD1P08F94 4074 aa3.6□□□□□ -1.83
SMCO1-201ENST00000397537 IGLV6-57P01721 117 aa3.6□□□□□ -1.83
SMCO1-201ENST00000397537 DEFB108BQ8NET1 73 aa3.6□□□□□ -1.83
SMCO1-201ENST00000397537 KMT2AQ03164 3969 aa3.59□□□□□ -1.84
SMCO1-201ENST00000397537 SRRM2Q9UQ35 2752 aaKnown RBP3.58□□□□□ -1.84
SMCO1-201ENST00000397537 MT3P25713 68 aa3.58□□□□□ -1.84
SMCO1-201ENST00000397537 LINC00472Q9H8W2 130 aa3.58□□□□□ -1.84
SMCO1-201ENST00000397537 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.57□□□□□ -1.84
SMCO1-201ENST00000397537 HMCN2Q8NDA2 5059 aa3.56□□□□□ -1.84
SMCO1-201ENST00000397537 NBDYA0A0U1RRE5 68 aa3.56□□□□□ -1.84
SMCO1-201ENST00000397537 K7EIM0 57 aa3.56□□□□□ -1.84
SMCO1-201ENST00000397537 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
SMCO1-201ENST00000397537 COX6A2Q02221 97 aa3.55□□□□□ -1.84
SMCO1-201ENST00000397537 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
SMCO1-201ENST00000397537 DNAH17Q9UFH2 4485 aa3.54□□□□□ -1.84
SMCO1-201ENST00000397537 RNF213Q63HN8 5207 aa3.54□□□□□ -1.84
SMCO1-201ENST00000397537 VPS13DQ5THJ4 4388 aa3.54□□□□□ -1.84
SMCO1-201ENST00000397537 RPL37AP61513 92 aaKnown RBP3.54□□□□□ -1.84
SMCO1-201ENST00000397537 PRR9Q5T870 116 aa3.54□□□□□ -1.84
SMCO1-201ENST00000397537 FAT2Q9NYQ8 4349 aa3.53□□□□□ -1.84
SMCO1-201ENST00000397537 LY6G6CO95867 125 aa3.53□□□□□ -1.84
SMCO1-201ENST00000397537 BRD3OSQ6XYD6 125 aa3.53□□□□□ -1.84
SMCO1-201ENST00000397537 LINC00304Q8N9R0 145 aa3.53□□□□□ -1.84
SMCO1-201ENST00000397537 TP53AIP1Q9HCN2 124 aa3.53□□□□□ -1.84
SMCO1-201ENST00000397537 K7EQZ3 153 aa3.52□□□□□ -1.85
SMCO1-201ENST00000397537 DNAH2Q9P225 4427 aa3.51□□□□□ -1.85
SMCO1-201ENST00000397537 ACYP2P14621 99 aa3.51□□□□□ -1.85
SMCO1-201ENST00000397537 KRTAP10-8P60410 259 aa3.51□□□□□ -1.85
SMCO1-201ENST00000397537 Q96NJ1 140 aa3.51□□□□□ -1.85
SMCO1-201ENST00000397537 IGLV5-48A0A075B6I7 105 aa3.51□□□□□ -1.85
SMCO1-201ENST00000397537 PKD1P98161 4303 aa3.51□□□□□ -1.85
SMCO1-201ENST00000397537 MYCBP2O75592 4640 aa3.51□□□□□ -1.85
SMCO1-201ENST00000397537 A0A1B0GVY2 172 aa3.5□□□□□ -1.85
SMCO1-201ENST00000397537 ANGP03950 147 aaKnown RBP3.5□□□□□ -1.85
SMCO1-201ENST00000397537 DEFB104AQ8WTQ1 72 aa3.5□□□□□ -1.85
SMCO1-201ENST00000397537 SORL1Q92673 2214 aa3.5□□□□□ -1.85
SMCO1-201ENST00000397537 APOBP04114 4563 aaKnown RBP3.5□□□□□ -1.85
SMCO1-201ENST00000397537 TOMM7Q9P0U1 55 aa3.49□□□□□ -1.85
SMCO1-201ENST00000397537 C5orf56Q8N8D9 126 aa3.48□□□□□ -1.85
SMCO1-201ENST00000397537 DNAH6Q9C0G6 4158 aa3.48□□□□□ -1.85
SMCO1-201ENST00000397537 Q6ZRN7 208 aaPredicted RBP3.47□□□□□ -1.85
SMCO1-201ENST00000397537 WFDC13Q8IUB5 93 aa3.47□□□□□ -1.85
SMCO1-201ENST00000397537 IGKV2-24A0A0C4DH68 120 aa3.46□□□□□ -1.86
SMCO1-201ENST00000397537 INE1O15225 51 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms