RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 NIPBLQ6KC79 2804 aaeCLIP8.76□□□□□ -1.01
CHL1-202ENST00000397491 ZANQ9Y493 2812 aa8.75□□□□□ -1.01
CHL1-202ENST00000397491 PANO1I0J062 215 aa8.75□□□□□ -1.01
CHL1-202ENST00000397491 NDUFAF8A1L188 74 aa8.73□□□□□ -1.01
CHL1-202ENST00000397491 DNAH14Q0VDD8 3507 aa8.72□□□□□ -1.01
CHL1-202ENST00000397491 APCP25054 2843 aa8.69□□□□□ -1.02
CHL1-202ENST00000397491 DCHS2Q6V1P9 2916 aa8.68□□□□□ -1.02
CHL1-202ENST00000397491 KRTAP11-1Q8IUC1 163 aa8.67□□□□□ -1.02
CHL1-202ENST00000397491 KRTAP7-1Q8IUC3 87 aa8.67□□□□□ -1.02
CHL1-202ENST00000397491 M0QZ58 72 aa8.66□□□□□ -1.02
CHL1-202ENST00000397491 DMXL1Q9Y485 3027 aa8.64□□□□□ -1.03
CHL1-202ENST00000397491 SPEGQ15772 3267 aa8.59□□□□□ -1.03
CHL1-202ENST00000397491 NF1P21359 2839 aa8.57□□□□□ -1.04
CHL1-202ENST00000397491 A8MUU9 505 aa8.57□□□□□ -1.04
CHL1-202ENST00000397491 TNRC18O15417 2968 aaPredicted RBP8.56□□□□□ -1.04
CHL1-202ENST00000397491 KRTAP10-1P60331 282 aa8.55□□□□□ -1.04
CHL1-202ENST00000397491 KRTAP10-2P60368 255 aa8.54□□□□□ -1.04
CHL1-202ENST00000397491 TENM3Q9P273 2699 aa8.51□□□□□ -1.05
CHL1-202ENST00000397491 FBN2P35556 2912 aa8.47□□□□□ -1.05
CHL1-202ENST00000397491 LOC400499M0QZD8 3231 aa8.46□□□□□ -1.06
CHL1-202ENST00000397491 SPTBN5Q9NRC6 3674 aaKnown RBP8.46□□□□□ -1.06
CHL1-202ENST00000397491 KRTAP13-1Q8IUC0 172 aa8.46□□□□□ -1.06
CHL1-202ENST00000397491 M0R2T5 61 aa8.45□□□□□ -1.06
CHL1-202ENST00000397491 PLAC4Q8WY50 150 aa8.42□□□□□ -1.06
CHL1-202ENST00000397491 MYO15AQ9UKN7 3530 aa8.41□□□□□ -1.06
CHL1-202ENST00000397491 Q5VSD8 79 aa8.37□□□□□ -1.07
CHL1-202ENST00000397491 USP34Q70CQ2 3546 aa8.36□□□□□ -1.07
CHL1-202ENST00000397491 KRTAP13-2Q52LG2 175 aa8.36□□□□□ -1.07
CHL1-202ENST00000397491 SEC61BP60468 96 aaKnown RBP8.35□□□□□ -1.07
CHL1-202ENST00000397491 C20orf166-AS1Q96NR2 134 aa8.34□□□□□ -1.07
CHL1-202ENST00000397491 Q6ZRN7 208 aaPredicted RBP8.33□□□□□ -1.08
CHL1-202ENST00000397491 TENM1Q9UKZ4 2725 aa8.33□□□□□ -1.08
CHL1-202ENST00000397491 PKD1L1Q8TDX9 2849 aa8.3□□□□□ -1.08
CHL1-202ENST00000397491 DCHS1Q96JQ0 3298 aa8.3□□□□□ -1.08
CHL1-202ENST00000397491 C10orf95Q9H7T3 257 aa8.29□□□□□ -1.08
CHL1-202ENST00000397491 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
CHL1-202ENST00000397491 HRNRQ86YZ3 2850 aaPredicted RBP8.28□□□□□ -1.08
CHL1-202ENST00000397491 H0YAA0 97 aa8.26□□□□□ -1.09
CHL1-202ENST00000397491 MXRA5Q9NR99 2828 aa8.2□□□□□ -1.1
CHL1-202ENST00000397491 TENM2Q9NT68 2774 aa8.17□□□□□ -1.1
CHL1-202ENST00000397491 CELSR1Q9NYQ6 3014 aa8.1□□□□□ -1.11
CHL1-202ENST00000397491 P0C880 135 aa8.09□□□□□ -1.11
CHL1-202ENST00000397491 DMDP11532 3685 aa8.08□□□□□ -1.12
CHL1-202ENST00000397491 VWFP04275 2813 aa8.07□□□□□ -1.12
CHL1-202ENST00000397491 RELNP78509 3460 aa8.05□□□□□ -1.12
CHL1-202ENST00000397491 TNP1P09430 55 aa8.05□□□□□ -1.12
CHL1-202ENST00000397491 WDFY3Q8IZQ1 3526 aa8□□□□□ -1.13
CHL1-202ENST00000397491 KRTAP21-3Q3LHN1 58 aa7.99□□□□□ -1.13
CHL1-202ENST00000397491 SRRM2Q9UQ35 2752 aaKnown RBP7.99□□□□□ -1.13
CHL1-202ENST00000397491 PP632Q6XCG6 107 aa7.98□□□□□ -1.13
CHL1-202ENST00000397491 FBN1P35555 2871 aaKnown RBP7.98□□□□□ -1.13
CHL1-202ENST00000397491 MUC3AQ02505 3323 aa7.97□□□□□ -1.13
CHL1-202ENST00000397491 TGP01266 2768 aa7.95□□□□□ -1.14
CHL1-202ENST00000397491 PDZD2O15018 2839 aa7.93□□□□□ -1.14
CHL1-202ENST00000397491 KRTAP10-8P60410 259 aa7.92□□□□□ -1.14
CHL1-202ENST00000397491 KRTAP1-4P0C5Y4 121 aa7.9□□□□□ -1.15
CHL1-202ENST00000397491 SPENQ96T58 3664 aaKnown RBP7.88□□□□□ -1.15
CHL1-202ENST00000397491 KRTAP13-3Q3SY46 172 aa7.87□□□□□ -1.15
CHL1-202ENST00000397491 LAMA5O15230 3695 aa7.8□□□□□ -1.16
CHL1-202ENST00000397491 OTOGQ6ZRI0 2925 aa7.79□□□□□ -1.16
CHL1-202ENST00000397491 XP32Q5T750 250 aa7.76□□□□□ -1.17
CHL1-202ENST00000397491 ASPMQ8IZT6 3477 aa7.76□□□□□ -1.17
CHL1-202ENST00000397491 ZFHX3Q15911 3703 aa7.69□□□□□ -1.18
CHL1-202ENST00000397491 ZFHX4Q86UP3 3567 aa7.68□□□□□ -1.18
CHL1-202ENST00000397491 TPRXLQ17RH7 258 aa7.68□□□□□ -1.18
CHL1-202ENST00000397491 BSNQ9UPA5 3926 aa7.67□□□□□ -1.18
CHL1-202ENST00000397491 KRTAP12-2P59991 146 aa7.65□□□□□ -1.18
CHL1-202ENST00000397491 A0A1B0GVY2 172 aa7.54□□□□□ -1.2
CHL1-202ENST00000397491 NBPF19A0A087WUL8 3843 aa7.5□□□□□ -1.21
CHL1-202ENST00000397491 KRTAP12-1P59990 96 aa7.49□□□□□ -1.21
CHL1-202ENST00000397491 KRTAP3-1Q9BYR8 98 aa7.44□□□□□ -1.22
CHL1-202ENST00000397491 FBN3Q75N90 2809 aa7.44□□□□□ -1.22
CHL1-202ENST00000397491 CUBNO60494 3623 aa7.43□□□□□ -1.22
CHL1-202ENST00000397491 SMG1Q96Q15 3661 aaKnown RBP7.42□□□□□ -1.22
CHL1-202ENST00000397491 CSMD1Q96PZ7 3565 aa7.42□□□□□ -1.22
CHL1-202ENST00000397491 COL7A1Q02388 2944 aa7.41□□□□□ -1.22
CHL1-202ENST00000397491 KRTAP13-4Q3LI77 160 aa7.4□□□□□ -1.23
CHL1-202ENST00000397491 CSMD2Q7Z408 3487 aa7.38□□□□□ -1.23
CHL1-202ENST00000397491 KRTAP15-1Q3LI76 137 aa7.32□□□□□ -1.24
CHL1-202ENST00000397491 KRTAP10-6P60371 365 aaPredicted RBP7.29□□□□□ -1.24
CHL1-202ENST00000397491 KRTAP10-10P60014 251 aa7.25□□□□□ -1.25
CHL1-202ENST00000397491 MEGF8Q7Z7M0 2845 aa7.24□□□□□ -1.25
CHL1-202ENST00000397491 SVEP1Q4LDE5 3571 aa7.23□□□□□ -1.25
CHL1-202ENST00000397491 PRO2289Q9P1D8 64 aa7.16□□□□□ -1.26
CHL1-202ENST00000397491 TRRAPQ9Y4A5 3859 aa7.1□□□□□ -1.27
CHL1-202ENST00000397491 VPS13CQ709C8 3753 aa7.05□□□□□ -1.28
CHL1-202ENST00000397491 KRTAP3-2Q9BYR7 98 aa7.02□□□□□ -1.29
CHL1-202ENST00000397491 INE1O15225 51 aa6.99□□□□□ -1.29
CHL1-202ENST00000397491 KRTAP3-3Q9BYR6 98 aa6.95□□□□□ -1.3
CHL1-202ENST00000397491 ANK3Q12955 4377 aaKnown RBP6.88□□□□□ -1.31
CHL1-202ENST00000397491 AKAP9Q99996 3911 aa6.87□□□□□ -1.31
CHL1-202ENST00000397491 ZNF469Q96JG9 3925 aaPredicted RBP6.75□□□□□ -1.33
CHL1-202ENST00000397491 MT1HL1P0DM35 61 aa6.7□□□□□ -1.34
CHL1-202ENST00000397491 KRTAP4-5Q9BYR2 181 aa6.62□□□□□ -1.35
CHL1-202ENST00000397491 KRTAP10-12P60413 245 aa6.54□□□□□ -1.36
CHL1-202ENST00000397491 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
CHL1-202ENST00000397491 CMYA5Q8N3K9 4069 aa6.53□□□□□ -1.36
CHL1-202ENST00000397491 KRTAP10-4P60372 401 aaPredicted RBP6.53□□□□□ -1.36
CHL1-202ENST00000397491 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
CHL1-202ENST00000397491 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms