RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 LIMD2Q9BT23 127 aa8.26□□□□□ -1.09
NUP98-204ENST00000397004 DNAH11Q96DT5 4516 aa8.26□□□□□ -1.09
NUP98-204ENST00000397004 PLAC8Q9NZF1 115 aa8.25□□□□□ -1.09
NUP98-204ENST00000397004 PSORS1C2Q9UIG4 136 aa8.25□□□□□ -1.09
NUP98-204ENST00000397004 A0A1B0GVX0 72 aa8.25□□□□□ -1.09
NUP98-204ENST00000397004 Q5W150 140 aa8.25□□□□□ -1.09
NUP98-204ENST00000397004 HRES1P13985 223 aa8.24□□□□□ -1.09
NUP98-204ENST00000397004 Q75L30 129 aa8.23□□□□□ -1.09
NUP98-204ENST00000397004 SPAG11AQ6PDA7 123 aa8.23□□□□□ -1.09
NUP98-204ENST00000397004 SEC61GP60059 68 aa8.22□□□□□ -1.09
NUP98-204ENST00000397004 KRTAP13-3Q3SY46 172 aa8.22□□□□□ -1.09
NUP98-204ENST00000397004 NDUFS5O43920 106 aa8.21□□□□□ -1.1
NUP98-204ENST00000397004 TP53AIP1Q9HCN2 124 aa8.21□□□□□ -1.1
NUP98-204ENST00000397004 DNAH5Q8TE73 4624 aa8.2□□□□□ -1.1
NUP98-204ENST00000397004 IGLV5-52A0A0A0MRZ9 124 aa8.2□□□□□ -1.1
NUP98-204ENST00000397004 KRTAP21-3Q3LHN1 58 aa8.2□□□□□ -1.1
NUP98-204ENST00000397004 A0A087WTM6 91 aa8.19□□□□□ -1.1
NUP98-204ENST00000397004 MRPL34Q9BQ48 92 aaKnown RBP8.19□□□□□ -1.1
NUP98-204ENST00000397004 SPINK7P58062 85 aa8.16□□□□□ -1.1
NUP98-204ENST00000397004 LINC01558Q9Y6Z2 57 aa8.16□□□□□ -1.1
NUP98-204ENST00000397004 LRP1BQ9NZR2 4599 aa8.16□□□□□ -1.1
NUP98-204ENST00000397004 A6NED7 52 aa8.15□□□□□ -1.1
NUP98-204ENST00000397004 SPTSSBQ8NFR3 76 aa8.15□□□□□ -1.1
NUP98-204ENST00000397004 NUPR2A6NF83 97 aa8.15□□□□□ -1.11
NUP98-204ENST00000397004 ZNF861PO60384 105 aa8.14□□□□□ -1.11
NUP98-204ENST00000397004 RTL8CO15255 209 aa8.14□□□□□ -1.11
NUP98-204ENST00000397004 PRR26Q8N8Z3 221 aa8.14□□□□□ -1.11
NUP98-204ENST00000397004 SPINK6Q6UWN8 80 aa8.13□□□□□ -1.11
NUP98-204ENST00000397004 A6NN06 94 aa8.12□□□□□ -1.11
NUP98-204ENST00000397004 CDC42SE1Q9NRR8 79 aa8.09□□□□□ -1.11
NUP98-204ENST00000397004 ATP11AUNQ6ZP68 121 aa8.09□□□□□ -1.12
NUP98-204ENST00000397004 FAT2Q9NYQ8 4349 aa8.08□□□□□ -1.12
NUP98-204ENST00000397004 PKD1P98161 4303 aa8.07□□□□□ -1.12
NUP98-204ENST00000397004 ZNF706Q9Y5V0 76 aaPredicted RBP8.07□□□□□ -1.12
NUP98-204ENST00000397004 HYDINQ4G0P3 5121 aa8.06□□□□□ -1.12
NUP98-204ENST00000397004 CDK2AP2O75956 126 aa8.06□□□□□ -1.12
NUP98-204ENST00000397004 CIRBP-AS1Q8TBR5 109 aa8.06□□□□□ -1.12
NUP98-204ENST00000397004 VPS13BQ7Z7G8 4022 aa8.04□□□□□ -1.12
NUP98-204ENST00000397004 KTN1-AS1Q86SY8 53 aa8.04□□□□□ -1.12
NUP98-204ENST00000397004 IGLV7-43P04211 117 aa8.03□□□□□ -1.12
NUP98-204ENST00000397004 RETNLBQ9BQ08 111 aa8.02□□□□□ -1.13
NUP98-204ENST00000397004 KRTAP13-2Q52LG2 175 aa7.98□□□□□ -1.13
NUP98-204ENST00000397004 RBM12B-AS1Q9P1G2 102 aa7.97□□□□□ -1.13
NUP98-204ENST00000397004 KRTAP10-2P60368 255 aa7.96□□□□□ -1.14
NUP98-204ENST00000397004 DMAC1Q96GE9 116 aa7.95□□□□□ -1.14
NUP98-204ENST00000397004 KRTAP16-1A8MUX0 517 aa7.95□□□□□ -1.14
NUP98-204ENST00000397004 ACYP2P14621 99 aa7.91□□□□□ -1.14
NUP98-204ENST00000397004 LINC00313P59037 77 aa7.91□□□□□ -1.14
NUP98-204ENST00000397004 IGKV2-30P06310 120 aa7.89□□□□□ -1.15
NUP98-204ENST00000397004 PKHD1P08F94 4074 aa7.89□□□□□ -1.15
NUP98-204ENST00000397004 SSBP3-AS1Q7Z2R9 100 aa7.89□□□□□ -1.15
NUP98-204ENST00000397004 C8orf87E5RJ46 101 aa7.88□□□□□ -1.15
NUP98-204ENST00000397004 C1orf134Q5TEV5 83 aa7.87□□□□□ -1.15
NUP98-204ENST00000397004 ADM2Q7Z4H4 148 aa7.87□□□□□ -1.15
NUP98-204ENST00000397004 C7orf65Q6ZTY9 151 aa7.86□□□□□ -1.15
NUP98-204ENST00000397004 KRTAP1-4P0C5Y4 121 aa7.85□□□□□ -1.15
NUP98-204ENST00000397004 FAM229AH3BQW9 127 aa7.84□□□□□ -1.15
NUP98-204ENST00000397004 PRAC1Q96KF2 57 aa7.83□□□□□ -1.16
NUP98-204ENST00000397004 KRTAP10-1P60331 282 aa7.82□□□□□ -1.16
NUP98-204ENST00000397004 LY6G6CO95867 125 aa7.81□□□□□ -1.16
NUP98-204ENST00000397004 SACSQ9NZJ4 4579 aa7.8□□□□□ -1.16
NUP98-204ENST00000397004 Q6ZSA8 131 aa7.78□□□□□ -1.16
NUP98-204ENST00000397004 IGKV2D-30A0A075B6S6 120 aa7.78□□□□□ -1.16
NUP98-204ENST00000397004 A0A1B0GU69 56 aa7.78□□□□□ -1.16
NUP98-204ENST00000397004 SPATA8Q6RVD6 105 aa7.77□□□□□ -1.17
NUP98-204ENST00000397004 PLA2G1BP04054 148 aaKnown RBP7.69□□□□□ -1.18
NUP98-204ENST00000397004 FAT1Q14517 4588 aa7.68□□□□□ -1.18
NUP98-204ENST00000397004 MIR22HGQ0VDD5 57 aa7.68□□□□□ -1.18
NUP98-204ENST00000397004 Q8N1X5 172 aa7.68□□□□□ -1.18
NUP98-204ENST00000397004 UQCR11O14957 56 aa7.64□□□□□ -1.19
NUP98-204ENST00000397004 SPINK1P00995 79 aa7.64□□□□□ -1.19
NUP98-204ENST00000397004 PKHD1L1Q86WI1 4243 aa7.63□□□□□ -1.19
NUP98-204ENST00000397004 RYR2Q92736 4967 aa7.63□□□□□ -1.19
NUP98-204ENST00000397004 DYNC1H1Q14204 4646 aaKnown RBP7.61□□□□□ -1.19
NUP98-204ENST00000397004 TYMSOSQ8TAI1 123 aa7.6□□□□□ -1.19
NUP98-204ENST00000397004 KRTAP3-1Q9BYR8 98 aa7.6□□□□□ -1.19
NUP98-204ENST00000397004 APOBP04114 4563 aaKnown RBP7.56□□□□□ -1.2
NUP98-204ENST00000397004 KMT2CQ8NEZ4 4911 aaKnown RBP7.56□□□□□ -1.2
NUP98-204ENST00000397004 H0YAA0 97 aa7.54□□□□□ -1.2
NUP98-204ENST00000397004 C4orf48Q5BLP8 95 aa7.52□□□□□ -1.21
NUP98-204ENST00000397004 A0A1B0GVY2 172 aa7.52□□□□□ -1.21
NUP98-204ENST00000397004 CSAG1Q6PB30 78 aa7.51□□□□□ -1.21
NUP98-204ENST00000397004 C9orf92A6NGG3 77 aa7.51□□□□□ -1.21
NUP98-204ENST00000397004 LINC01554Q52M75 96 aa7.48□□□□□ -1.21
NUP98-204ENST00000397004 LINC00304Q8N9R0 145 aa7.48□□□□□ -1.21
NUP98-204ENST00000397004 SMR3BP02814 79 aaPredicted RBP7.47□□□□□ -1.21
NUP98-204ENST00000397004 A8MUU9 505 aa7.44□□□□□ -1.22
NUP98-204ENST00000397004 HSPG2P98160 4391 aa7.44□□□□□ -1.22
NUP98-204ENST00000397004 LRP1Q07954 4544 aaKnown RBP7.44□□□□□ -1.22
NUP98-204ENST00000397004 C20orf166-AS1Q96NR2 134 aa7.44□□□□□ -1.22
NUP98-204ENST00000397004 KRTAP10-4P60372 401 aaPredicted RBP7.43□□□□□ -1.22
NUP98-204ENST00000397004 RYR3Q15413 4870 aa7.41□□□□□ -1.22
NUP98-204ENST00000397004 RPS29P62273 56 aaKnown RBP7.4□□□□□ -1.22
NUP98-204ENST00000397004 FLG2Q5D862 2391 aaPredicted RBP7.39□□□□□ -1.23
NUP98-204ENST00000397004 FAT3Q8TDW7 4589 aa7.38□□□□□ -1.23
NUP98-204ENST00000397004 MYCBP2O75592 4640 aa7.36□□□□□ -1.23
NUP98-204ENST00000397004 TNXBP22105 4242 aa7.36□□□□□ -1.23
NUP98-204ENST00000397004 A0A1B0GU33 70 aa7.34□□□□□ -1.23
NUP98-204ENST00000397004 H1FX-AS1Q4G0G2 97 aa7.33□□□□□ -1.24
NUP98-204ENST00000397004 COX6B2Q6YFQ2 88 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms