RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 A0A087X002 238 aa6.8□□□□□ -1.32
PDXDC1-202ENST00000396410 NOTCH2NLQ7Z3S9 236 aa6.8□□□□□ -1.32
PDXDC1-202ENST00000396410 PRKDCP78527 4128 aaKnown RBP6.78□□□□□ -1.32
PDXDC1-202ENST00000396410 LOC101927531A0A1B0GV80 90 aa6.78□□□□□ -1.32
PDXDC1-202ENST00000396410 COA5Q86WW8 74 aa6.77□□□□□ -1.33
PDXDC1-202ENST00000396410 CHKB-CPT1BH3BT56 60 aa6.77□□□□□ -1.33
PDXDC1-202ENST00000396410 PRO0628Q9UI54 55 aa6.77□□□□□ -1.33
PDXDC1-202ENST00000396410 IGLV7-46A0A075B6I9 117 aa6.76□□□□□ -1.33
PDXDC1-202ENST00000396410 PRR15LQ9BU68 103 aa6.76□□□□□ -1.33
PDXDC1-202ENST00000396410 SMR3BP02814 79 aaPredicted RBP6.74□□□□□ -1.33
PDXDC1-202ENST00000396410 Q1T7F1 81 aa6.74□□□□□ -1.33
PDXDC1-202ENST00000396410 FAM229AH3BQW9 127 aa6.73□□□□□ -1.33
PDXDC1-202ENST00000396410 Q6ZSA8 131 aa6.73□□□□□ -1.33
PDXDC1-202ENST00000396410 KRTAP13-2Q52LG2 175 aa6.72□□□□□ -1.33
PDXDC1-202ENST00000396410 A8MUN3 132 aa6.72□□□□□ -1.33
PDXDC1-202ENST00000396410 ASB16-AS1Q495Z4 193 aa6.72□□□□□ -1.33
PDXDC1-202ENST00000396410 FBN3Q75N90 2809 aa6.72□□□□□ -1.33
PDXDC1-202ENST00000396410 C1orf195Q5TG92 126 aa6.71□□□□□ -1.33
PDXDC1-202ENST00000396410 SPAG11AQ6PDA7 123 aa6.7□□□□□ -1.34
PDXDC1-202ENST00000396410 KMT2AQ03164 3969 aa6.7□□□□□ -1.34
PDXDC1-202ENST00000396410 IGKV2D-30A0A075B6S6 120 aa6.69□□□□□ -1.34
PDXDC1-202ENST00000396410 IGKV2-30P06310 120 aa6.69□□□□□ -1.34
PDXDC1-202ENST00000396410 DNHD1Q96M86 4753 aa6.69□□□□□ -1.34
PDXDC1-202ENST00000396410 SPINK1P00995 79 aa6.69□□□□□ -1.34
PDXDC1-202ENST00000396410 KRTAP21-3Q3LHN1 58 aa6.69□□□□□ -1.34
PDXDC1-202ENST00000396410 LINC00304Q8N9R0 145 aa6.69□□□□□ -1.34
PDXDC1-202ENST00000396410 DNAH17Q9UFH2 4485 aa6.68□□□□□ -1.34
PDXDC1-202ENST00000396410 Q5W150 140 aa6.68□□□□□ -1.34
PDXDC1-202ENST00000396410 PRR26Q8N8Z3 221 aa6.67□□□□□ -1.34
PDXDC1-202ENST00000396410 ACYP2P14621 99 aa6.67□□□□□ -1.34
PDXDC1-202ENST00000396410 A6NED7 52 aa6.67□□□□□ -1.34
PDXDC1-202ENST00000396410 DNAH2Q9P225 4427 aa6.66□□□□□ -1.34
PDXDC1-202ENST00000396410 Q8N9P0 234 aaPredicted RBP6.65□□□□□ -1.35
PDXDC1-202ENST00000396410 KRTAP1-4P0C5Y4 121 aa6.63□□□□□ -1.35
PDXDC1-202ENST00000396410 HRES1P13985 223 aa6.62□□□□□ -1.35
PDXDC1-202ENST00000396410 HECTD4Q9Y4D8 3996 aa6.61□□□□□ -1.35
PDXDC1-202ENST00000396410 SPTSSBQ8NFR3 76 aa6.61□□□□□ -1.35
PDXDC1-202ENST00000396410 DNAH8Q96JB1 4490 aa6.61□□□□□ -1.35
PDXDC1-202ENST00000396410 C7orf65Q6ZTY9 151 aa6.59□□□□□ -1.35
PDXDC1-202ENST00000396410 Q5VV11 94 aa6.57□□□□□ -1.36
PDXDC1-202ENST00000396410 DNAH11Q96DT5 4516 aa6.57□□□□□ -1.36
PDXDC1-202ENST00000396410 FRAS1Q86XX4 4008 aa6.57□□□□□ -1.36
PDXDC1-202ENST00000396410 C9orf92A6NGG3 77 aa6.57□□□□□ -1.36
PDXDC1-202ENST00000396410 ALMS1Q8TCU4 4167 aa6.54□□□□□ -1.36
PDXDC1-202ENST00000396410 LINC01558Q9Y6Z2 57 aa6.52□□□□□ -1.37
PDXDC1-202ENST00000396410 PMAIP1Q13794 54 aa6.51□□□□□ -1.37
PDXDC1-202ENST00000396410 Q75L30 129 aa6.51□□□□□ -1.37
PDXDC1-202ENST00000396410 DNAH5Q8TE73 4624 aa6.51□□□□□ -1.37
PDXDC1-202ENST00000396410 A0A1B0GU69 56 aa6.5□□□□□ -1.37
PDXDC1-202ENST00000396410 KRTAP13-3Q3SY46 172 aa6.5□□□□□ -1.37
PDXDC1-202ENST00000396410 DMAC1Q96GE9 116 aa6.5□□□□□ -1.37
PDXDC1-202ENST00000396410 DNAH6Q9C0G6 4158 aa6.5□□□□□ -1.37
PDXDC1-202ENST00000396410 KRTAP16-1A8MUX0 517 aa6.48□□□□□ -1.37
PDXDC1-202ENST00000396410 RPS29P62273 56 aaKnown RBP6.48□□□□□ -1.37
PDXDC1-202ENST00000396410 SEC61GP60059 68 aa6.47□□□□□ -1.37
PDXDC1-202ENST00000396410 Q8N1X5 172 aa6.46□□□□□ -1.38
PDXDC1-202ENST00000396410 LRP1BQ9NZR2 4599 aa6.45□□□□□ -1.38
PDXDC1-202ENST00000396410 HYDINQ4G0P3 5121 aa6.44□□□□□ -1.38
PDXDC1-202ENST00000396410 A0A1B0GVY2 172 aa6.42□□□□□ -1.38
PDXDC1-202ENST00000396410 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
PDXDC1-202ENST00000396410 SPINK7P58062 85 aa6.4□□□□□ -1.39
PDXDC1-202ENST00000396410 ATP11AUNQ6ZP68 121 aa6.4□□□□□ -1.39
PDXDC1-202ENST00000396410 A8MU10 97 aa6.4□□□□□ -1.39
PDXDC1-202ENST00000396410 LCA10Q71F78 164 aa6.37□□□□□ -1.39
PDXDC1-202ENST00000396410 Q5VSD8 79 aa6.36□□□□□ -1.39
PDXDC1-202ENST00000396410 FAT2Q9NYQ8 4349 aa6.35□□□□□ -1.39
PDXDC1-202ENST00000396410 VPS13BQ7Z7G8 4022 aa6.34□□□□□ -1.39
PDXDC1-202ENST00000396410 PKD1P98161 4303 aa6.33□□□□□ -1.4
PDXDC1-202ENST00000396410 UQCR11O14957 56 aa6.33□□□□□ -1.4
PDXDC1-202ENST00000396410 A8MUU9 505 aa6.3□□□□□ -1.4
PDXDC1-202ENST00000396410 C20orf166-AS1Q96NR2 134 aa6.3□□□□□ -1.4
PDXDC1-202ENST00000396410 MIR22HGQ0VDD5 57 aa6.3□□□□□ -1.4
PDXDC1-202ENST00000396410 DYNC1H1Q14204 4646 aaKnown RBP6.28□□□□□ -1.4
PDXDC1-202ENST00000396410 SACSQ9NZJ4 4579 aa6.27□□□□□ -1.4
PDXDC1-202ENST00000396410 KRTAP10-4P60372 401 aaPredicted RBP6.26□□□□□ -1.41
PDXDC1-202ENST00000396410 KTN1-AS1Q86SY8 53 aa6.23□□□□□ -1.41
PDXDC1-202ENST00000396410 DMBT1Q9UGM3 2413 aaPredicted RBP6.23□□□□□ -1.41
PDXDC1-202ENST00000396410 FAT1Q14517 4588 aa6.23□□□□□ -1.41
PDXDC1-202ENST00000396410 PKHD1P08F94 4074 aa6.23□□□□□ -1.41
PDXDC1-202ENST00000396410 FLG2Q5D862 2391 aaPredicted RBP6.19□□□□□ -1.42
PDXDC1-202ENST00000396410 COX6B2Q6YFQ2 88 aa6.18□□□□□ -1.42
PDXDC1-202ENST00000396410 A6NN06 94 aa6.17□□□□□ -1.42
PDXDC1-202ENST00000396410 SPATA8Q6RVD6 105 aa6.16□□□□□ -1.42
PDXDC1-202ENST00000396410 KRTAP10-8P60410 259 aa6.15□□□□□ -1.42
PDXDC1-202ENST00000396410 APOBP04114 4563 aaKnown RBP6.13□□□□□ -1.43
PDXDC1-202ENST00000396410 A0A1B0GU33 70 aa6.13□□□□□ -1.43
PDXDC1-202ENST00000396410 RPL37P61927 97 aaKnown RBP6.13□□□□□ -1.43
PDXDC1-202ENST00000396410 K7ERS5 55 aa6.11□□□□□ -1.43
PDXDC1-202ENST00000396410 RYR2Q92736 4967 aa6.1□□□□□ -1.43
PDXDC1-202ENST00000396410 XP32Q5T750 250 aa6.08□□□□□ -1.44
PDXDC1-202ENST00000396410 KRTAP3-1Q9BYR8 98 aa6.07□□□□□ -1.44
PDXDC1-202ENST00000396410 H1FX-AS1Q4G0G2 97 aa6.05□□□□□ -1.44
PDXDC1-202ENST00000396410 S4R3F8 94 aa6.05□□□□□ -1.44
PDXDC1-202ENST00000396410 RBM12B-AS1Q9P1G2 102 aa6.02□□□□□ -1.45
PDXDC1-202ENST00000396410 PRAC1Q96KF2 57 aa6.02□□□□□ -1.45
PDXDC1-202ENST00000396410 KMT2CQ8NEZ4 4911 aaKnown RBP6.01□□□□□ -1.45
PDXDC1-202ENST00000396410 J3QL48 77 aa6□□□□□ -1.45
PDXDC1-202ENST00000396410 H0YAA0 97 aa5.96□□□□□ -1.46
PDXDC1-202ENST00000396410 PKHD1L1Q86WI1 4243 aa5.95□□□□□ -1.46
PDXDC1-202ENST00000396410 A0A0D9SG42 100 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms