RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 TP53AIP1Q9HCN2 124 aa8.55□□□□□ -1.04
CLIP2-203ENST00000395060 KRTAP13-1Q8IUC0 172 aa8.54□□□□□ -1.04
CLIP2-203ENST00000395060 CIRBP-AS1Q8TBR5 109 aa8.54□□□□□ -1.04
CLIP2-203ENST00000395060 A6NN06 94 aa8.53□□□□□ -1.04
CLIP2-203ENST00000395060 MEGF8Q7Z7M0 2845 aa8.53□□□□□ -1.04
CLIP2-203ENST00000395060 PSORS1C2Q9UIG4 136 aa8.53□□□□□ -1.04
CLIP2-203ENST00000395060 LINC01558Q9Y6Z2 57 aa8.53□□□□□ -1.04
CLIP2-203ENST00000395060 STARD9Q9P2P6 4700 aa8.52□□□□□ -1.05
CLIP2-203ENST00000395060 NBDYA0A0U1RRE5 68 aa8.51□□□□□ -1.05
CLIP2-203ENST00000395060 Q6ZR54 194 aa8.51□□□□□ -1.05
CLIP2-203ENST00000395060 WWC2-AS2Q96NR7 200 aa8.5□□□□□ -1.05
CLIP2-203ENST00000395060 FBN3Q75N90 2809 aa8.49□□□□□ -1.05
CLIP2-203ENST00000395060 PRAC1Q96KF2 57 aa8.49□□□□□ -1.05
CLIP2-203ENST00000395060 DNHD1Q96M86 4753 aa8.49□□□□□ -1.05
CLIP2-203ENST00000395060 KMT2AQ03164 3969 aa8.48□□□□□ -1.05
CLIP2-203ENST00000395060 ASB16-AS1Q495Z4 193 aa8.47□□□□□ -1.05
CLIP2-203ENST00000395060 SPACA4Q8TDM5 124 aa8.47□□□□□ -1.05
CLIP2-203ENST00000395060 DNAH8Q96JB1 4490 aa8.47□□□□□ -1.05
CLIP2-203ENST00000395060 NUPR2A6NF83 97 aa8.45□□□□□ -1.06
CLIP2-203ENST00000395060 ADM2Q7Z4H4 148 aa8.45□□□□□ -1.06
CLIP2-203ENST00000395060 C7orf65Q6ZTY9 151 aa8.43□□□□□ -1.06
CLIP2-203ENST00000395060 PLAC8Q9NZF1 115 aa8.43□□□□□ -1.06
CLIP2-203ENST00000395060 Q6ZRN7 208 aaPredicted RBP8.42□□□□□ -1.06
CLIP2-203ENST00000395060 RTL8CO15255 209 aa8.41□□□□□ -1.06
CLIP2-203ENST00000395060 IGLV5-52A0A0A0MRZ9 124 aa8.4□□□□□ -1.06
CLIP2-203ENST00000395060 H3BS24 57 aa8.4□□□□□ -1.06
CLIP2-203ENST00000395060 DYNC2H1Q8NCM8 4307 aaKnown RBP8.4□□□□□ -1.07
CLIP2-203ENST00000395060 LINC00483Q53H64 154 aa8.39□□□□□ -1.07
CLIP2-203ENST00000395060 A0A087WTM6 91 aa8.39□□□□□ -1.07
CLIP2-203ENST00000395060 ZNF861PO60384 105 aa8.39□□□□□ -1.07
CLIP2-203ENST00000395060 ZNF706Q9Y5V0 76 aaPredicted RBP8.39□□□□□ -1.07
CLIP2-203ENST00000395060 LINC00313P59037 77 aa8.37□□□□□ -1.07
CLIP2-203ENST00000395060 ACYP2P14621 99 aa8.36□□□□□ -1.07
CLIP2-203ENST00000395060 DNAH17Q9UFH2 4485 aa8.36□□□□□ -1.07
CLIP2-203ENST00000395060 HECTD4Q9Y4D8 3996 aa8.34□□□□□ -1.07
CLIP2-203ENST00000395060 VPS13DQ5THJ4 4388 aa8.34□□□□□ -1.07
CLIP2-203ENST00000395060 DNAH2Q9P225 4427 aa8.34□□□□□ -1.07
CLIP2-203ENST00000395060 A0A1B0GU69 56 aa8.34□□□□□ -1.08
CLIP2-203ENST00000395060 IGKV2D-30A0A075B6S6 120 aa8.33□□□□□ -1.08
CLIP2-203ENST00000395060 LY6G6CO95867 125 aa8.33□□□□□ -1.08
CLIP2-203ENST00000395060 IGKV2-30P06310 120 aa8.33□□□□□ -1.08
CLIP2-203ENST00000395060 SPINK1P00995 79 aa8.31□□□□□ -1.08
CLIP2-203ENST00000395060 KRTAP13-3Q3SY46 172 aa8.29□□□□□ -1.08
CLIP2-203ENST00000395060 DNAH6Q9C0G6 4158 aa8.27□□□□□ -1.09
CLIP2-203ENST00000395060 IGLV7-43P04211 117 aa8.27□□□□□ -1.09
CLIP2-203ENST00000395060 C1orf134Q5TEV5 83 aa8.24□□□□□ -1.09
CLIP2-203ENST00000395060 DMAC1Q96GE9 116 aa8.23□□□□□ -1.09
CLIP2-203ENST00000395060 MIR22HGQ0VDD5 57 aa8.2□□□□□ -1.1
CLIP2-203ENST00000395060 FAM229AH3BQW9 127 aa8.19□□□□□ -1.1
CLIP2-203ENST00000395060 DNAH11Q96DT5 4516 aa8.18□□□□□ -1.1
CLIP2-203ENST00000395060 Q8N1X5 172 aa8.18□□□□□ -1.1
CLIP2-203ENST00000395060 ALMS1Q8TCU4 4167 aa8.18□□□□□ -1.1
CLIP2-203ENST00000395060 C8orf87E5RJ46 101 aa8.18□□□□□ -1.1
CLIP2-203ENST00000395060 KRTAP10-2P60368 255 aa8.16□□□□□ -1.1
CLIP2-203ENST00000395060 KRTAP13-2Q52LG2 175 aa8.15□□□□□ -1.11
CLIP2-203ENST00000395060 UQCR11O14957 56 aa8.14□□□□□ -1.11
CLIP2-203ENST00000395060 FLG2Q5D862 2391 aaPredicted RBP8.13□□□□□ -1.11
CLIP2-203ENST00000395060 SSBP3-AS1Q7Z2R9 100 aa8.12□□□□□ -1.11
CLIP2-203ENST00000395060 LRP1BQ9NZR2 4599 aa8.11□□□□□ -1.11
CLIP2-203ENST00000395060 CSAG1Q6PB30 78 aa8.1□□□□□ -1.11
CLIP2-203ENST00000395060 SPATA8Q6RVD6 105 aa8.1□□□□□ -1.11
CLIP2-203ENST00000395060 HYDINQ4G0P3 5121 aa8.09□□□□□ -1.11
CLIP2-203ENST00000395060 DNAH5Q8TE73 4624 aa8.08□□□□□ -1.12
CLIP2-203ENST00000395060 PLA2G1BP04054 148 aaKnown RBP8.07□□□□□ -1.12
CLIP2-203ENST00000395060 LINC01554Q52M75 96 aa8.07□□□□□ -1.12
CLIP2-203ENST00000395060 KRTAP16-1A8MUX0 517 aa8.05□□□□□ -1.12
CLIP2-203ENST00000395060 KRTAP10-1P60331 282 aa8.02□□□□□ -1.13
CLIP2-203ENST00000395060 VPS13BQ7Z7G8 4022 aa7.97□□□□□ -1.13
CLIP2-203ENST00000395060 C9orf92A6NGG3 77 aa7.97□□□□□ -1.13
CLIP2-203ENST00000395060 CRIPTQ9P021 101 aa7.96□□□□□ -1.14
CLIP2-203ENST00000395060 TYMSOSQ8TAI1 123 aa7.96□□□□□ -1.14
CLIP2-203ENST00000395060 DMBT1Q9UGM3 2413 aaPredicted RBP7.95□□□□□ -1.14
CLIP2-203ENST00000395060 FAT2Q9NYQ8 4349 aa7.95□□□□□ -1.14
CLIP2-203ENST00000395060 PKHD1P08F94 4074 aa7.93□□□□□ -1.14
CLIP2-203ENST00000395060 KRTAP1-4P0C5Y4 121 aa7.92□□□□□ -1.14
CLIP2-203ENST00000395060 PKD1P98161 4303 aa7.92□□□□□ -1.14
CLIP2-203ENST00000395060 Q6ZSA8 131 aa7.88□□□□□ -1.15
CLIP2-203ENST00000395060 H0YAA0 97 aa7.87□□□□□ -1.15
CLIP2-203ENST00000395060 SMR3BP02814 79 aaPredicted RBP7.86□□□□□ -1.15
CLIP2-203ENST00000395060 SACSQ9NZJ4 4579 aa7.81□□□□□ -1.16
CLIP2-203ENST00000395060 A0A1B0GU33 70 aa7.79□□□□□ -1.16
CLIP2-203ENST00000395060 LINC00304Q8N9R0 145 aa7.78□□□□□ -1.16
CLIP2-203ENST00000395060 FAT1Q14517 4588 aa7.78□□□□□ -1.16
CLIP2-203ENST00000395060 KRTAP3-1Q9BYR8 98 aa7.75□□□□□ -1.17
CLIP2-203ENST00000395060 A8MUU9 505 aa7.74□□□□□ -1.17
CLIP2-203ENST00000395060 DYNC1H1Q14204 4646 aaKnown RBP7.72□□□□□ -1.17
CLIP2-203ENST00000395060 H1FX-AS1Q4G0G2 97 aa7.69□□□□□ -1.18
CLIP2-203ENST00000395060 KRTAP25-1Q3LHN0 102 aa7.69□□□□□ -1.18
CLIP2-203ENST00000395060 A0A0D9SG42 100 aa7.67□□□□□ -1.18
CLIP2-203ENST00000395060 KMT2CQ8NEZ4 4911 aaKnown RBP7.66□□□□□ -1.18
CLIP2-203ENST00000395060 KRTAP21-3Q3LHN1 58 aa7.62□□□□□ -1.19
CLIP2-203ENST00000395060 COX6B2Q6YFQ2 88 aa7.61□□□□□ -1.19
CLIP2-203ENST00000395060 ROMO1P60602 79 aa7.58□□□□□ -1.2
CLIP2-203ENST00000395060 K7ERS5 55 aa7.58□□□□□ -1.2
CLIP2-203ENST00000395060 APOBP04114 4563 aaKnown RBP7.56□□□□□ -1.2
CLIP2-203ENST00000395060 MYCBP2O75592 4640 aa7.55□□□□□ -1.2
CLIP2-203ENST00000395060 C20orf166-AS1Q96NR2 134 aa7.55□□□□□ -1.2
CLIP2-203ENST00000395060 A0A1B0GVY2 172 aa7.53□□□□□ -1.2
CLIP2-203ENST00000395060 A0A0A0MQY5 61 aa7.52□□□□□ -1.21
CLIP2-203ENST00000395060 RYR2Q92736 4967 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms