RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 DNAH3Q8TD57 4116 aa6.3□□□□□ -1.4
ACTN1-203ENST00000394419 SPANXA2-OT1Q8N9U9 137 aa6.29□□□□□ -1.4
ACTN1-203ENST00000394419 Q96NJ1 140 aa6.28□□□□□ -1.4
ACTN1-203ENST00000394419 LIMD2Q9BT23 127 aa6.28□□□□□ -1.4
ACTN1-203ENST00000394419 PLAC8Q9NZF1 115 aa6.27□□□□□ -1.41
ACTN1-203ENST00000394419 Q8N9P0 234 aaPredicted RBP6.27□□□□□ -1.41
ACTN1-203ENST00000394419 IGLV7-46A0A075B6I9 117 aa6.26□□□□□ -1.41
ACTN1-203ENST00000394419 H3BS24 57 aa6.26□□□□□ -1.41
ACTN1-203ENST00000394419 Q5VV11 94 aa6.26□□□□□ -1.41
ACTN1-203ENST00000394419 LINC00483Q53H64 154 aa6.25□□□□□ -1.41
ACTN1-203ENST00000394419 KRTAP10-2P60368 255 aa6.24□□□□□ -1.41
ACTN1-203ENST00000394419 DNAH1Q9P2D7 4330 aa6.24□□□□□ -1.41
ACTN1-203ENST00000394419 PRR26Q8N8Z3 221 aa6.24□□□□□ -1.41
ACTN1-203ENST00000394419 LINC00313P59037 77 aa6.23□□□□□ -1.41
ACTN1-203ENST00000394419 Q6ZR54 194 aa6.23□□□□□ -1.41
ACTN1-203ENST00000394419 IGKV2D-30A0A075B6S6 120 aa6.22□□□□□ -1.41
ACTN1-203ENST00000394419 IGKV2-30P06310 120 aa6.22□□□□□ -1.41
ACTN1-203ENST00000394419 STARD9Q9P2P6 4700 aa6.21□□□□□ -1.41
ACTN1-203ENST00000394419 Q5W150 140 aa6.21□□□□□ -1.42
ACTN1-203ENST00000394419 LCA10Q71F78 164 aa6.2□□□□□ -1.42
ACTN1-203ENST00000394419 LOC101927531A0A1B0GV80 90 aa6.19□□□□□ -1.42
ACTN1-203ENST00000394419 HRES1P13985 223 aa6.19□□□□□ -1.42
ACTN1-203ENST00000394419 SSBP3-AS1Q7Z2R9 100 aa6.19□□□□□ -1.42
ACTN1-203ENST00000394419 KMT2AQ03164 3969 aa6.18□□□□□ -1.42
ACTN1-203ENST00000394419 C8orf87E5RJ46 101 aa6.18□□□□□ -1.42
ACTN1-203ENST00000394419 PRAC1Q96KF2 57 aa6.17□□□□□ -1.42
ACTN1-203ENST00000394419 PRKDCP78527 4128 aaKnown RBP6.17□□□□□ -1.42
ACTN1-203ENST00000394419 FRAS1Q86XX4 4008 aa6.17□□□□□ -1.42
ACTN1-203ENST00000394419 PLA2G1BP04054 148 aaKnown RBP6.16□□□□□ -1.42
ACTN1-203ENST00000394419 ATP11AUNQ6ZP68 121 aa6.16□□□□□ -1.42
ACTN1-203ENST00000394419 SPINK1P00995 79 aa6.15□□□□□ -1.42
ACTN1-203ENST00000394419 ACYP2P14621 99 aa6.15□□□□□ -1.42
ACTN1-203ENST00000394419 KRTAP10-1P60331 282 aa6.15□□□□□ -1.43
ACTN1-203ENST00000394419 TYMSOSQ8TAI1 123 aa6.13□□□□□ -1.43
ACTN1-203ENST00000394419 SMR3BP02814 79 aaPredicted RBP6.13□□□□□ -1.43
ACTN1-203ENST00000394419 C7orf65Q6ZTY9 151 aa6.13□□□□□ -1.43
ACTN1-203ENST00000394419 FAM229AH3BQW9 127 aa6.12□□□□□ -1.43
ACTN1-203ENST00000394419 A6NN06 94 aa6.12□□□□□ -1.43
ACTN1-203ENST00000394419 ASB16-AS1Q495Z4 193 aa6.11□□□□□ -1.43
ACTN1-203ENST00000394419 SPINK7P58062 85 aa6.1□□□□□ -1.43
ACTN1-203ENST00000394419 KRTAP13-2Q52LG2 175 aa6.09□□□□□ -1.43
ACTN1-203ENST00000394419 Q75L30 129 aa6.09□□□□□ -1.43
ACTN1-203ENST00000394419 ADM2Q7Z4H4 148 aa6.08□□□□□ -1.44
ACTN1-203ENST00000394419 DNHD1Q96M86 4753 aa6.08□□□□□ -1.44
ACTN1-203ENST00000394419 A0A1B0GU69 56 aa6.08□□□□□ -1.44
ACTN1-203ENST00000394419 LINC01558Q9Y6Z2 57 aa6.08□□□□□ -1.44
ACTN1-203ENST00000394419 DNAH11Q96DT5 4516 aa6.08□□□□□ -1.44
ACTN1-203ENST00000394419 DNAH8Q96JB1 4490 aa6.07□□□□□ -1.44
ACTN1-203ENST00000394419 VPS13DQ5THJ4 4388 aa6.06□□□□□ -1.44
ACTN1-203ENST00000394419 HECTD4Q9Y4D8 3996 aa6.05□□□□□ -1.44
ACTN1-203ENST00000394419 CDC42SE1Q9NRR8 79 aa6.05□□□□□ -1.44
ACTN1-203ENST00000394419 C9orf92A6NGG3 77 aa6.04□□□□□ -1.44
ACTN1-203ENST00000394419 DNAH17Q9UFH2 4485 aa6.04□□□□□ -1.44
ACTN1-203ENST00000394419 Q8N1X5 172 aa6.04□□□□□ -1.44
ACTN1-203ENST00000394419 DNAH2Q9P225 4427 aa6.03□□□□□ -1.44
ACTN1-203ENST00000394419 DNAH6Q9C0G6 4158 aa6.01□□□□□ -1.45
ACTN1-203ENST00000394419 DMBT1Q9UGM3 2413 aaPredicted RBP6.01□□□□□ -1.45
ACTN1-203ENST00000394419 LINC00304Q8N9R0 145 aa6□□□□□ -1.45
ACTN1-203ENST00000394419 LINC01554Q52M75 96 aa5.99□□□□□ -1.45
ACTN1-203ENST00000394419 DMAC1Q96GE9 116 aa5.97□□□□□ -1.45
ACTN1-203ENST00000394419 DYNC2H1Q8NCM8 4307 aaKnown RBP5.97□□□□□ -1.45
ACTN1-203ENST00000394419 KRTAP1-4P0C5Y4 121 aa5.95□□□□□ -1.46
ACTN1-203ENST00000394419 KRTAP13-3Q3SY46 172 aa5.95□□□□□ -1.46
ACTN1-203ENST00000394419 LRP1BQ9NZR2 4599 aa5.95□□□□□ -1.46
ACTN1-203ENST00000394419 FLG2Q5D862 2391 aaPredicted RBP5.94□□□□□ -1.46
ACTN1-203ENST00000394419 Q6ZSA8 131 aa5.93□□□□□ -1.46
ACTN1-203ENST00000394419 UQCR11O14957 56 aa5.91□□□□□ -1.46
ACTN1-203ENST00000394419 MIR22HGQ0VDD5 57 aa5.91□□□□□ -1.46
ACTN1-203ENST00000394419 KRTAP16-1A8MUX0 517 aa5.89□□□□□ -1.47
ACTN1-203ENST00000394419 DNAH5Q8TE73 4624 aa5.88□□□□□ -1.47
ACTN1-203ENST00000394419 CSAG1Q6PB30 78 aa5.85□□□□□ -1.47
ACTN1-203ENST00000394419 HYDINQ4G0P3 5121 aa5.85□□□□□ -1.47
ACTN1-203ENST00000394419 VPS13BQ7Z7G8 4022 aa5.85□□□□□ -1.47
ACTN1-203ENST00000394419 ALMS1Q8TCU4 4167 aa5.82□□□□□ -1.48
ACTN1-203ENST00000394419 FAT1Q14517 4588 aa5.79□□□□□ -1.48
ACTN1-203ENST00000394419 PKHD1P08F94 4074 aa5.77□□□□□ -1.49
ACTN1-203ENST00000394419 SPATA8Q6RVD6 105 aa5.76□□□□□ -1.49
ACTN1-203ENST00000394419 FAT2Q9NYQ8 4349 aa5.71□□□□□ -1.5
ACTN1-203ENST00000394419 A0A1B0GU33 70 aa5.7□□□□□ -1.5
ACTN1-203ENST00000394419 DYNC1H1Q14204 4646 aaKnown RBP5.68□□□□□ -1.5
ACTN1-203ENST00000394419 PKD1P98161 4303 aa5.67□□□□□ -1.5
ACTN1-203ENST00000394419 A8MUU9 505 aa5.66□□□□□ -1.5
ACTN1-203ENST00000394419 K7ERS5 55 aa5.66□□□□□ -1.5
ACTN1-203ENST00000394419 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
ACTN1-203ENST00000394419 C20orf166-AS1Q96NR2 134 aa5.65□□□□□ -1.5
ACTN1-203ENST00000394419 CRIPTQ9P021 101 aa5.65□□□□□ -1.5
ACTN1-203ENST00000394419 A0A0D9SG42 100 aa5.64□□□□□ -1.51
ACTN1-203ENST00000394419 Q5VSD8 79 aa5.61□□□□□ -1.51
ACTN1-203ENST00000394419 COX6B2Q6YFQ2 88 aa5.61□□□□□ -1.51
ACTN1-203ENST00000394419 KRTAP3-1Q9BYR8 98 aa5.61□□□□□ -1.51
ACTN1-203ENST00000394419 H0YAA0 97 aa5.6□□□□□ -1.51
ACTN1-203ENST00000394419 H1FX-AS1Q4G0G2 97 aa5.6□□□□□ -1.51
ACTN1-203ENST00000394419 SACSQ9NZJ4 4579 aa5.59□□□□□ -1.51
ACTN1-203ENST00000394419 MYCBP2O75592 4640 aa5.58□□□□□ -1.52
ACTN1-203ENST00000394419 ROMO1P60602 79 aa5.58□□□□□ -1.52
ACTN1-203ENST00000394419 A0A1B0GVY2 172 aa5.58□□□□□ -1.52
ACTN1-203ENST00000394419 LRP1Q07954 4544 aaKnown RBP5.55□□□□□ -1.52
ACTN1-203ENST00000394419 APOBP04114 4563 aaKnown RBP5.52□□□□□ -1.53
ACTN1-203ENST00000394419 KRTAP10-4P60372 401 aaPredicted RBP5.52□□□□□ -1.53
ACTN1-203ENST00000394419 S4R3F8 94 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms