RNA–Protein interactions for RNA: ENST00000393238.7

TMCC1-201, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC1, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-201ENST00000393238 KRTAP10-10P60014 251 aa4.97□□□□□ -1.61
TMCC1-201ENST00000393238 TACC2O95359 2948 aa4.97□□□□□ -1.61
TMCC1-201ENST00000393238 LRBAP50851 2863 aa4.97□□□□□ -1.61
TMCC1-201ENST00000393238 FRYLO94915 3013 aa4.96□□□□□ -1.62
TMCC1-201ENST00000393238 REV3LO60673 3130 aa4.95□□□□□ -1.62
TMCC1-201ENST00000393238 KRTAP16-1A8MUX0 517 aa4.95□□□□□ -1.62
TMCC1-201ENST00000393238 DMXL2Q8TDJ6 3036 aa4.92□□□□□ -1.62
TMCC1-201ENST00000393238 CRYBG3Q68DQ2 2970 aa4.92□□□□□ -1.62
TMCC1-201ENST00000393238 LAMA1P25391 3075 aa4.9□□□□□ -1.63
TMCC1-201ENST00000393238 KRTAP25-1Q3LHN0 102 aa4.89□□□□□ -1.63
TMCC1-201ENST00000393238 NBEAQ8NFP9 2946 aa4.89□□□□□ -1.63
TMCC1-201ENST00000393238 VPS13AQ96RL7 3174 aa4.88□□□□□ -1.63
TMCC1-201ENST00000393238 A8MU10 97 aa4.88□□□□□ -1.63
TMCC1-201ENST00000393238 ASH1LQ9NR48 2969 aaKnown RBP4.87□□□□□ -1.63
TMCC1-201ENST00000393238 UNC80Q8N2C7 3258 aa4.87□□□□□ -1.63
TMCC1-201ENST00000393238 XIRP2A4UGR9 3374 aa4.85□□□□□ -1.63
TMCC1-201ENST00000393238 TENM2Q9NT68 2774 aa4.84□□□□□ -1.63
TMCC1-201ENST00000393238 CDH23Q9H251 3354 aa4.84□□□□□ -1.63
TMCC1-201ENST00000393238 PP632Q6XCG6 107 aa4.82□□□□□ -1.64
TMCC1-201ENST00000393238 LAMA2P24043 3122 aaKnown RBP4.82□□□□□ -1.64
TMCC1-201ENST00000393238 ZZEF1O43149 2961 aa4.82□□□□□ -1.64
TMCC1-201ENST00000393238 KALRNO60229 2985 aa4.81□□□□□ -1.64
TMCC1-201ENST00000393238 SZT2Q5T011 3432 aa4.81□□□□□ -1.64
TMCC1-201ENST00000393238 COL6A3P12111 3177 aa4.77□□□□□ -1.65
TMCC1-201ENST00000393238 DCHS2Q6V1P9 2916 aa4.77□□□□□ -1.65
TMCC1-201ENST00000393238 NF1P21359 2839 aa4.77□□□□□ -1.65
TMCC1-201ENST00000393238 MXRA5Q9NR99 2828 aa4.77□□□□□ -1.65
TMCC1-201ENST00000393238 TENM1Q9UKZ4 2725 aa4.77□□□□□ -1.65
TMCC1-201ENST00000393238 TENM3Q9P273 2699 aa4.76□□□□□ -1.65
TMCC1-201ENST00000393238 CELSR2Q9HCU4 2923 aa4.76□□□□□ -1.65
TMCC1-201ENST00000393238 ADGRG4Q8IZF6 3080 aa4.75□□□□□ -1.65
TMCC1-201ENST00000393238 NDUFAF8A1L188 74 aa4.75□□□□□ -1.65
TMCC1-201ENST00000393238 ZANQ9Y493 2812 aa4.73□□□□□ -1.65
TMCC1-201ENST00000393238 HRNRQ86YZ3 2850 aaPredicted RBP4.73□□□□□ -1.65
TMCC1-201ENST00000393238 DMXL1Q9Y485 3027 aa4.72□□□□□ -1.65
TMCC1-201ENST00000393238 PDZD2O15018 2839 aa4.72□□□□□ -1.65
TMCC1-201ENST00000393238 BOD1L1Q8NFC6 3051 aa4.7□□□□□ -1.66
TMCC1-201ENST00000393238 USP34Q70CQ2 3546 aa4.67□□□□□ -1.66
TMCC1-201ENST00000393238 FBN2P35556 2912 aa4.63□□□□□ -1.67
TMCC1-201ENST00000393238 H0YAA0 97 aa4.62□□□□□ -1.67
TMCC1-201ENST00000393238 C10orf95Q9H7T3 257 aa4.6□□□□□ -1.67
TMCC1-201ENST00000393238 SPTBN5Q9NRC6 3674 aaKnown RBP4.6□□□□□ -1.67
TMCC1-201ENST00000393238 CELSR3Q9NYQ7 3312 aa4.59□□□□□ -1.67
TMCC1-201ENST00000393238 FREM2Q5SZK8 3169 aa4.59□□□□□ -1.67
TMCC1-201ENST00000393238 VCANP13611 3396 aa4.58□□□□□ -1.68
TMCC1-201ENST00000393238 MT1HL1P0DM35 61 aa4.58□□□□□ -1.68
TMCC1-201ENST00000393238 OTOGQ6ZRI0 2925 aa4.58□□□□□ -1.68
TMCC1-201ENST00000393238 P0C880 135 aa4.58□□□□□ -1.68
TMCC1-201ENST00000393238 CELSR1Q9NYQ6 3014 aa4.54□□□□□ -1.68
TMCC1-201ENST00000393238 PKD1L1Q8TDX9 2849 aa4.5□□□□□ -1.69
TMCC1-201ENST00000393238 CFAP47Q6ZTR5 3102 aa4.47□□□□□ -1.69
TMCC1-201ENST00000393238 ANK3Q12955 4377 aaKnown RBP4.47□□□□□ -1.69
TMCC1-201ENST00000393238 TGP01266 2768 aa4.44□□□□□ -1.7
TMCC1-201ENST00000393238 KRTAP4-5Q9BYR2 181 aa4.44□□□□□ -1.7
TMCC1-201ENST00000393238 KRTAP10-4P60372 401 aaPredicted RBP4.43□□□□□ -1.7
TMCC1-201ENST00000393238 FBN3Q75N90 2809 aa4.42□□□□□ -1.7
TMCC1-201ENST00000393238 KRTAP13-4Q3LI77 160 aa4.41□□□□□ -1.7
TMCC1-201ENST00000393238 ALMS1Q8TCU4 4167 aa4.41□□□□□ -1.7
TMCC1-201ENST00000393238 VWFP04275 2813 aa4.4□□□□□ -1.7
TMCC1-201ENST00000393238 FBN1P35555 2871 aaKnown RBP4.39□□□□□ -1.71
TMCC1-201ENST00000393238 DNAH14Q0VDD8 3507 aa4.39□□□□□ -1.71
TMCC1-201ENST00000393238 SPEGQ15772 3267 aa4.37□□□□□ -1.71
TMCC1-201ENST00000393238 NBPF19A0A087WUL8 3843 aa4.36□□□□□ -1.71
TMCC1-201ENST00000393238 LOC400499M0QZD8 3231 aa4.34□□□□□ -1.71
TMCC1-201ENST00000393238 KRTAP3-1Q9BYR8 98 aa4.34□□□□□ -1.71
TMCC1-201ENST00000393238 KRTAP12-2P59991 146 aa4.33□□□□□ -1.72
TMCC1-201ENST00000393238 KRTAP12-1P59990 96 aa4.3□□□□□ -1.72
TMCC1-201ENST00000393238 DCHS1Q96JQ0 3298 aa4.29□□□□□ -1.72
TMCC1-201ENST00000393238 HUWE1Q7Z6Z7 4374 aaKnown RBP4.27□□□□□ -1.73
TMCC1-201ENST00000393238 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
TMCC1-201ENST00000393238 ZFHX3Q15911 3703 aa4.23□□□□□ -1.73
TMCC1-201ENST00000393238 RELNP78509 3460 aa4.22□□□□□ -1.73
TMCC1-201ENST00000393238 KRTAP10-12P60413 245 aa4.19□□□□□ -1.74
TMCC1-201ENST00000393238 KRTAP10-6P60371 365 aaPredicted RBP4.18□□□□□ -1.74
TMCC1-201ENST00000393238 MYO15AQ9UKN7 3530 aa4.17□□□□□ -1.74
TMCC1-201ENST00000393238 MEGF8Q7Z7M0 2845 aa4.15□□□□□ -1.75
TMCC1-201ENST00000393238 WDFY3Q8IZQ1 3526 aa4.14□□□□□ -1.75
TMCC1-201ENST00000393238 SRRM2Q9UQ35 2752 aaKnown RBP4.11□□□□□ -1.75
TMCC1-201ENST00000393238 DNAH1Q9P2D7 4330 aa4.09□□□□□ -1.75
TMCC1-201ENST00000393238 KRTAP3-3Q9BYR6 98 aa4.08□□□□□ -1.76
TMCC1-201ENST00000393238 DNAH11Q96DT5 4516 aa4.06□□□□□ -1.76
TMCC1-201ENST00000393238 KRTAP3-2Q9BYR7 98 aa4.05□□□□□ -1.76
TMCC1-201ENST00000393238 KRTAP8-1Q8IUC2 63 aa4.04□□□□□ -1.76
TMCC1-201ENST00000393238 DNAH9Q9NYC9 4486 aa4.04□□□□□ -1.76
TMCC1-201ENST00000393238 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
TMCC1-201ENST00000393238 DNAH10Q8IVF4 4471 aa4.03□□□□□ -1.76
TMCC1-201ENST00000393238 ASPMQ8IZT6 3477 aa4.02□□□□□ -1.77
TMCC1-201ENST00000393238 TRRAPQ9Y4A5 3859 aa4.02□□□□□ -1.77
TMCC1-201ENST00000393238 MT1HP80294 61 aa4.02□□□□□ -1.77
TMCC1-201ENST00000393238 LAMA5O15230 3695 aa4.01□□□□□ -1.77
TMCC1-201ENST00000393238 MUC3AQ02505 3323 aa4.01□□□□□ -1.77
TMCC1-201ENST00000393238 COL7A1Q02388 2944 aa4□□□□□ -1.77
TMCC1-201ENST00000393238 KRTAP12-3P60328 96 aa3.99□□□□□ -1.77
TMCC1-201ENST00000393238 ZFHX4Q86UP3 3567 aa3.98□□□□□ -1.77
TMCC1-201ENST00000393238 DNAH5Q8TE73 4624 aa3.98□□□□□ -1.77
TMCC1-201ENST00000393238 INE1O15225 51 aa3.96□□□□□ -1.77
TMCC1-201ENST00000393238 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
TMCC1-201ENST00000393238 CSMD1Q96PZ7 3565 aa3.94□□□□□ -1.78
TMCC1-201ENST00000393238 LORP23490 312 aaPredicted RBP3.93□□□□□ -1.78
TMCC1-201ENST00000393238 DNAH2Q9P225 4427 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms