RNA–Protein interactions for RNA: ENST00000392025.5

SPTBN4-204, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SPTBN4, Length 8,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-204ENST00000392025 TNP1P09430 55 aa10.26□□□□□ -0.77
SPTBN4-204ENST00000392025 CELSR2Q9HCU4 2923 aa10.25□□□□□ -0.77
SPTBN4-204ENST00000392025 HTTP42858 3142 aa10.24□□□□□ -0.77
SPTBN4-204ENST00000392025 C10orf95Q9H7T3 257 aa10.23□□□□□ -0.77
SPTBN4-204ENST00000392025 TNRC18O15417 2968 aaPredicted RBP10.2□□□□□ -0.78
SPTBN4-204ENST00000392025 TACC2O95359 2948 aa10.2□□□□□ -0.78
SPTBN4-204ENST00000392025 A8MU10 97 aa10.19□□□□□ -0.78
SPTBN4-204ENST00000392025 TENM3Q9P273 2699 aa10.18□□□□□ -0.78
SPTBN4-204ENST00000392025 DNAH14Q0VDD8 3507 aa10.18□□□□□ -0.78
SPTBN4-204ENST00000392025 ZZEF1O43149 2961 aa10.18□□□□□ -0.78
SPTBN4-204ENST00000392025 BRCA2P51587 3418 aa10.16□□□□□ -0.78
SPTBN4-204ENST00000392025 COL6A3P12111 3177 aa10.15□□□□□ -0.78
SPTBN4-204ENST00000392025 BOD1L1Q8NFC6 3051 aa10.15□□□□□ -0.78
SPTBN4-204ENST00000392025 NIPBLQ6KC79 2804 aaeCLIP10.13□□□□□ -0.79
SPTBN4-204ENST00000392025 NOTCH2NLQ7Z3S9 236 aa10.12□□□□□ -0.79
SPTBN4-204ENST00000392025 CDH23Q9H251 3354 aa10.04□□□□□ -0.8
SPTBN4-204ENST00000392025 NBEAQ8NFP9 2946 aa10.01□□□□□ -0.81
SPTBN4-204ENST00000392025 SPEGQ15772 3267 aa9.97□□□□□ -0.81
SPTBN4-204ENST00000392025 P0C880 135 aa9.97□□□□□ -0.81
SPTBN4-204ENST00000392025 VCANP13611 3396 aa9.95□□□□□ -0.82
SPTBN4-204ENST00000392025 DCHS2Q6V1P9 2916 aa9.95□□□□□ -0.82
SPTBN4-204ENST00000392025 ADGRG4Q8IZF6 3080 aa9.94□□□□□ -0.82
SPTBN4-204ENST00000392025 DMXL1Q9Y485 3027 aa9.91□□□□□ -0.82
SPTBN4-204ENST00000392025 ATMQ13315 3056 aa9.91□□□□□ -0.82
SPTBN4-204ENST00000392025 CELSR1Q9NYQ6 3014 aa9.9□□□□□ -0.82
SPTBN4-204ENST00000392025 KRTAP21-3Q3LHN1 58 aa9.88□□□□□ -0.83
SPTBN4-204ENST00000392025 Q6ZRN7 208 aaPredicted RBP9.87□□□□□ -0.83
SPTBN4-204ENST00000392025 CFAP47Q6ZTR5 3102 aa9.87□□□□□ -0.83
SPTBN4-204ENST00000392025 TENM4Q6N022 2769 aa9.85□□□□□ -0.83
SPTBN4-204ENST00000392025 PDZD2O15018 2839 aa9.85□□□□□ -0.83
SPTBN4-204ENST00000392025 PRO2289Q9P1D8 64 aa9.82□□□□□ -0.84
SPTBN4-204ENST00000392025 TGP01266 2768 aa9.8□□□□□ -0.84
SPTBN4-204ENST00000392025 ZANQ9Y493 2812 aa9.74□□□□□ -0.85
SPTBN4-204ENST00000392025 H0YAA0 97 aa9.72□□□□□ -0.85
SPTBN4-204ENST00000392025 FBN2P35556 2912 aa9.7□□□□□ -0.86
SPTBN4-204ENST00000392025 KRTAP13-1Q8IUC0 172 aa9.69□□□□□ -0.86
SPTBN4-204ENST00000392025 KRTAP13-2Q52LG2 175 aa9.68□□□□□ -0.86
SPTBN4-204ENST00000392025 KRTAP10-8P60410 259 aa9.68□□□□□ -0.86
SPTBN4-204ENST00000392025 PKD1L1Q8TDX9 2849 aa9.66□□□□□ -0.86
SPTBN4-204ENST00000392025 NBPF19A0A087WUL8 3843 aa9.65□□□□□ -0.87
SPTBN4-204ENST00000392025 VWFP04275 2813 aa9.63□□□□□ -0.87
SPTBN4-204ENST00000392025 EYSQ5T1H1 3165 aa9.62□□□□□ -0.87
SPTBN4-204ENST00000392025 SZT2Q5T011 3432 aa9.57□□□□□ -0.88
SPTBN4-204ENST00000392025 TPRXLQ17RH7 258 aa9.52□□□□□ -0.89
SPTBN4-204ENST00000392025 TENM2Q9NT68 2774 aa9.52□□□□□ -0.89
SPTBN4-204ENST00000392025 SPTBN5Q9NRC6 3674 aaKnown RBP9.5□□□□□ -0.89
SPTBN4-204ENST00000392025 MXRA5Q9NR99 2828 aa9.45□□□□□ -0.9
SPTBN4-204ENST00000392025 KRTAP7-1Q8IUC3 87 aa9.44□□□□□ -0.9
SPTBN4-204ENST00000392025 XP32Q5T750 250 aa9.42□□□□□ -0.9
SPTBN4-204ENST00000392025 SRRM2Q9UQ35 2752 aaKnown RBP9.41□□□□□ -0.9
SPTBN4-204ENST00000392025 HRNRQ86YZ3 2850 aaPredicted RBP9.4□□□□□ -0.9
SPTBN4-204ENST00000392025 WDFY3Q8IZQ1 3526 aa9.39□□□□□ -0.91
SPTBN4-204ENST00000392025 KRTAP10-10P60014 251 aa9.38□□□□□ -0.91
SPTBN4-204ENST00000392025 ZFHX4Q86UP3 3567 aa9.35□□□□□ -0.91
SPTBN4-204ENST00000392025 COL7A1Q02388 2944 aa9.34□□□□□ -0.91
SPTBN4-204ENST00000392025 MYO15AQ9UKN7 3530 aa9.28□□□□□ -0.92
SPTBN4-204ENST00000392025 INE1O15225 51 aa9.23□□□□□ -0.93
SPTBN4-204ENST00000392025 A0A1B0GVY2 172 aa9.23□□□□□ -0.93
SPTBN4-204ENST00000392025 ZFHX3Q15911 3703 aa9.22□□□□□ -0.93
SPTBN4-204ENST00000392025 LOC400499M0QZD8 3231 aa9.21□□□□□ -0.93
SPTBN4-204ENST00000392025 ASPMQ8IZT6 3477 aa9.2□□□□□ -0.94
SPTBN4-204ENST00000392025 LAMA5O15230 3695 aa9.16□□□□□ -0.94
SPTBN4-204ENST00000392025 KRTAP1-4P0C5Y4 121 aa9.14□□□□□ -0.95
SPTBN4-204ENST00000392025 KRTAP13-4Q3LI77 160 aa9.12□□□□□ -0.95
SPTBN4-204ENST00000392025 KRTAP13-3Q3SY46 172 aa9.06□□□□□ -0.96
SPTBN4-204ENST00000392025 MEGF8Q7Z7M0 2845 aa8.96□□□□□ -0.97
SPTBN4-204ENST00000392025 KRTAP12-2P59991 146 aa8.94□□□□□ -0.98
SPTBN4-204ENST00000392025 SPENQ96T58 3664 aaKnown RBP8.93□□□□□ -0.98
SPTBN4-204ENST00000392025 RELNP78509 3460 aa8.93□□□□□ -0.98
SPTBN4-204ENST00000392025 KRTAP12-1P59990 96 aa8.81□□□□□ -1
SPTBN4-204ENST00000392025 DMDP11532 3685 aa8.8□□□□□ -1
SPTBN4-204ENST00000392025 SMG1Q96Q15 3661 aaKnown RBP8.79□□□□□ -1
SPTBN4-204ENST00000392025 DCHS1Q96JQ0 3298 aa8.78□□□□□ -1
SPTBN4-204ENST00000392025 FBN1P35555 2871 aaKnown RBP8.74□□□□□ -1.01
SPTBN4-204ENST00000392025 FBN3Q75N90 2809 aa8.72□□□□□ -1.01
SPTBN4-204ENST00000392025 CSMD1Q96PZ7 3565 aa8.69□□□□□ -1.02
SPTBN4-204ENST00000392025 KRTAP15-1Q3LI76 137 aa8.67□□□□□ -1.02
SPTBN4-204ENST00000392025 TRRAPQ9Y4A5 3859 aa8.57□□□□□ -1.04
SPTBN4-204ENST00000392025 VPS13CQ709C8 3753 aa8.5□□□□□ -1.05
SPTBN4-204ENST00000392025 OTOGQ6ZRI0 2925 aa8.39□□□□□ -1.07
SPTBN4-204ENST00000392025 KRTAP23-1A1A580 65 aa8.35□□□□□ -1.07
SPTBN4-204ENST00000392025 AKAP9Q99996 3911 aa8.33□□□□□ -1.08
SPTBN4-204ENST00000392025 CUBNO60494 3623 aa8.29□□□□□ -1.08
SPTBN4-204ENST00000392025 KRTAP10-6P60371 365 aaPredicted RBP8.26□□□□□ -1.09
SPTBN4-204ENST00000392025 MUC3AQ02505 3323 aa8.25□□□□□ -1.09
SPTBN4-204ENST00000392025 SVEP1Q4LDE5 3571 aa8.23□□□□□ -1.09
SPTBN4-204ENST00000392025 KRTAP3-1Q9BYR8 98 aa8.2□□□□□ -1.1
SPTBN4-204ENST00000392025 KRTAP10-12P60413 245 aa8.15□□□□□ -1.1
SPTBN4-204ENST00000392025 BSNQ9UPA5 3926 aa8.12□□□□□ -1.11
SPTBN4-204ENST00000392025 CSMD3Q7Z407 3707 aa8.09□□□□□ -1.11
SPTBN4-204ENST00000392025 CSMD2Q7Z408 3487 aa8□□□□□ -1.13
SPTBN4-204ENST00000392025 KRTAP12-3P60328 96 aa7.89□□□□□ -1.15
SPTBN4-204ENST00000392025 CRCT1Q9UGL9 99 aa7.87□□□□□ -1.15
SPTBN4-204ENST00000392025 KRTAP3-2Q9BYR7 98 aa7.82□□□□□ -1.16
SPTBN4-204ENST00000392025 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.17
SPTBN4-204ENST00000392025 ALMS1Q8TCU4 4167 aa7.69□□□□□ -1.18
SPTBN4-204ENST00000392025 LYSTQ99698 3801 aa7.69□□□□□ -1.18
SPTBN4-204ENST00000392025 ZNF469Q96JG9 3925 aaPredicted RBP7.66□□□□□ -1.18
SPTBN4-204ENST00000392025 MT1HL1P0DM35 61 aa7.63□□□□□ -1.19
SPTBN4-204ENST00000392025 CMYA5Q8N3K9 4069 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms