RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 MDFIQ99750 246 aa10.76□□□□□ -0.69
ERCC2-201ENST00000391941 TP53AIP1Q9HCN2 124 aa10.76□□□□□ -0.69
ERCC2-201ENST00000391941 Q6ZRN7 208 aaPredicted RBP10.75□□□□□ -0.69
ERCC2-201ENST00000391941 HRES1P13985 223 aa10.74□□□□□ -0.69
ERCC2-201ENST00000391941 SPACA4Q8TDM5 124 aa10.74□□□□□ -0.69
ERCC2-201ENST00000391941 RETNLBQ9BQ08 111 aa10.74□□□□□ -0.69
ERCC2-201ENST00000391941 PSORS1C2Q9UIG4 136 aa10.74□□□□□ -0.69
ERCC2-201ENST00000391941 Q6ZR54 194 aa10.73□□□□□ -0.69
ERCC2-201ENST00000391941 A0A1B0GVX0 72 aa10.73□□□□□ -0.69
ERCC2-201ENST00000391941 Q5W150 140 aa10.72□□□□□ -0.69
ERCC2-201ENST00000391941 C8orf87E5RJ46 101 aa10.72□□□□□ -0.69
ERCC2-201ENST00000391941 SPINK7P58062 85 aa10.72□□□□□ -0.69
ERCC2-201ENST00000391941 Q75L30 129 aa10.72□□□□□ -0.69
ERCC2-201ENST00000391941 LINC00483Q53H64 154 aa10.71□□□□□ -0.69
ERCC2-201ENST00000391941 WWC2-AS2Q96NR7 200 aa10.71□□□□□ -0.69
ERCC2-201ENST00000391941 LOC101927531A0A1B0GV80 90 aa10.71□□□□□ -0.69
ERCC2-201ENST00000391941 CDK2AP2O75956 126 aa10.7□□□□□ -0.7
ERCC2-201ENST00000391941 DNAH6Q9C0G6 4158 aa10.69□□□□□ -0.7
ERCC2-201ENST00000391941 VPS13DQ5THJ4 4388 aa10.68□□□□□ -0.7
ERCC2-201ENST00000391941 MRPL34Q9BQ48 92 aaKnown RBP10.67□□□□□ -0.7
ERCC2-201ENST00000391941 PRKDCP78527 4128 aaKnown RBP10.67□□□□□ -0.7
ERCC2-201ENST00000391941 CIRBP-AS1Q8TBR5 109 aa10.66□□□□□ -0.7
ERCC2-201ENST00000391941 KTN1-AS1Q86SY8 53 aa10.64□□□□□ -0.71
ERCC2-201ENST00000391941 ZNF706Q9Y5V0 76 aaPredicted RBP10.63□□□□□ -0.71
ERCC2-201ENST00000391941 IGLV5-52A0A0A0MRZ9 124 aa10.62□□□□□ -0.71
ERCC2-201ENST00000391941 LINC01558Q9Y6Z2 57 aa10.62□□□□□ -0.71
ERCC2-201ENST00000391941 A0A087WTM6 91 aa10.61□□□□□ -0.71
ERCC2-201ENST00000391941 RTL8CO15255 209 aa10.6□□□□□ -0.71
ERCC2-201ENST00000391941 PLAC8Q9NZF1 115 aa10.59□□□□□ -0.71
ERCC2-201ENST00000391941 ATP11AUNQ6ZP68 121 aa10.59□□□□□ -0.71
ERCC2-201ENST00000391941 ALMS1Q8TCU4 4167 aa10.58□□□□□ -0.72
ERCC2-201ENST00000391941 ZNF861PO60384 105 aa10.58□□□□□ -0.72
ERCC2-201ENST00000391941 CDC42SE1Q9NRR8 79 aa10.56□□□□□ -0.72
ERCC2-201ENST00000391941 A6NN06 94 aa10.56□□□□□ -0.72
ERCC2-201ENST00000391941 DNAH11Q96DT5 4516 aa10.55□□□□□ -0.72
ERCC2-201ENST00000391941 NUPR2A6NF83 97 aa10.55□□□□□ -0.72
ERCC2-201ENST00000391941 KRTAP13-3Q3SY46 172 aa10.5□□□□□ -0.73
ERCC2-201ENST00000391941 LRP1BQ9NZR2 4599 aa10.46□□□□□ -0.74
ERCC2-201ENST00000391941 PRAC1Q96KF2 57 aa10.43□□□□□ -0.74
ERCC2-201ENST00000391941 IGLV7-43P04211 117 aa10.42□□□□□ -0.74
ERCC2-201ENST00000391941 ADM2Q7Z4H4 148 aa10.42□□□□□ -0.74
ERCC2-201ENST00000391941 DNAH5Q8TE73 4624 aa10.42□□□□□ -0.74
ERCC2-201ENST00000391941 ACYP2P14621 99 aa10.38□□□□□ -0.75
ERCC2-201ENST00000391941 DNHD1Q96M86 4753 aa10.35□□□□□ -0.75
ERCC2-201ENST00000391941 LINC00313P59037 77 aa10.34□□□□□ -0.75
ERCC2-201ENST00000391941 C7orf65Q6ZTY9 151 aa10.33□□□□□ -0.76
ERCC2-201ENST00000391941 IGKV2D-30A0A075B6S6 120 aa10.33□□□□□ -0.76
ERCC2-201ENST00000391941 IGKV2-30P06310 120 aa10.33□□□□□ -0.76
ERCC2-201ENST00000391941 KRTAP10-2P60368 255 aa10.33□□□□□ -0.76
ERCC2-201ENST00000391941 DMAC1Q96GE9 116 aa10.32□□□□□ -0.76
ERCC2-201ENST00000391941 FAT2Q9NYQ8 4349 aa10.31□□□□□ -0.76
ERCC2-201ENST00000391941 SSBP3-AS1Q7Z2R9 100 aa10.31□□□□□ -0.76
ERCC2-201ENST00000391941 HYDINQ4G0P3 5121 aa10.3□□□□□ -0.76
ERCC2-201ENST00000391941 LY6G6CO95867 125 aa10.3□□□□□ -0.76
ERCC2-201ENST00000391941 KRTAP13-2Q52LG2 175 aa10.3□□□□□ -0.76
ERCC2-201ENST00000391941 A0A0A0MQY5 61 aa10.29□□□□□ -0.76
ERCC2-201ENST00000391941 A0A1B0GU69 56 aa10.28□□□□□ -0.76
ERCC2-201ENST00000391941 FAM229AH3BQW9 127 aa10.28□□□□□ -0.76
ERCC2-201ENST00000391941 VPS13BQ7Z7G8 4022 aa10.27□□□□□ -0.76
ERCC2-201ENST00000391941 C1orf134Q5TEV5 83 aa10.27□□□□□ -0.77
ERCC2-201ENST00000391941 SPINK1P00995 79 aa10.25□□□□□ -0.77
ERCC2-201ENST00000391941 KRTAP16-1A8MUX0 517 aa10.18□□□□□ -0.78
ERCC2-201ENST00000391941 Q8N1X5 172 aa10.17□□□□□ -0.78
ERCC2-201ENST00000391941 PKD1P98161 4303 aa10.16□□□□□ -0.78
ERCC2-201ENST00000391941 KRTAP10-1P60331 282 aa10.14□□□□□ -0.79
ERCC2-201ENST00000391941 PKHD1P08F94 4074 aa10.12□□□□□ -0.79
ERCC2-201ENST00000391941 MIR22HGQ0VDD5 57 aa10.12□□□□□ -0.79
ERCC2-201ENST00000391941 LINC01554Q52M75 96 aa10.1□□□□□ -0.79
ERCC2-201ENST00000391941 SPATA8Q6RVD6 105 aa10.09□□□□□ -0.79
ERCC2-201ENST00000391941 KRTAP1-4P0C5Y4 121 aa10.06□□□□□ -0.8
ERCC2-201ENST00000391941 UQCR11O14957 56 aa10.04□□□□□ -0.8
ERCC2-201ENST00000391941 PLA2G1BP04054 148 aaKnown RBP10.02□□□□□ -0.8
ERCC2-201ENST00000391941 Q6ZSA8 131 aa9.99□□□□□ -0.81
ERCC2-201ENST00000391941 FLG2Q5D862 2391 aaPredicted RBP9.97□□□□□ -0.81
ERCC2-201ENST00000391941 TYMSOSQ8TAI1 123 aa9.96□□□□□ -0.81
ERCC2-201ENST00000391941 C9orf92A6NGG3 77 aa9.96□□□□□ -0.82
ERCC2-201ENST00000391941 CSAG1Q6PB30 78 aa9.96□□□□□ -0.82
ERCC2-201ENST00000391941 FAT1Q14517 4588 aa9.96□□□□□ -0.82
ERCC2-201ENST00000391941 SMR3BP02814 79 aaPredicted RBP9.89□□□□□ -0.83
ERCC2-201ENST00000391941 H0YAA0 97 aa9.82□□□□□ -0.84
ERCC2-201ENST00000391941 CRIPTQ9P021 101 aa9.78□□□□□ -0.84
ERCC2-201ENST00000391941 KRTAP3-1Q9BYR8 98 aa9.77□□□□□ -0.84
ERCC2-201ENST00000391941 LINC00304Q8N9R0 145 aa9.77□□□□□ -0.85
ERCC2-201ENST00000391941 DYNC1H1Q14204 4646 aaKnown RBP9.75□□□□□ -0.85
ERCC2-201ENST00000391941 SACSQ9NZJ4 4579 aa9.73□□□□□ -0.85
ERCC2-201ENST00000391941 DMBT1Q9UGM3 2413 aaPredicted RBP9.72□□□□□ -0.85
ERCC2-201ENST00000391941 RPS29P62273 56 aaKnown RBP9.65□□□□□ -0.87
ERCC2-201ENST00000391941 A0A1B0GU33 70 aa9.64□□□□□ -0.87
ERCC2-201ENST00000391941 MYCBP2O75592 4640 aa9.64□□□□□ -0.87
ERCC2-201ENST00000391941 A8MUU9 505 aa9.63□□□□□ -0.87
ERCC2-201ENST00000391941 C20orf166-AS1Q96NR2 134 aa9.61□□□□□ -0.87
ERCC2-201ENST00000391941 LRP1Q07954 4544 aaKnown RBP9.61□□□□□ -0.87
ERCC2-201ENST00000391941 H1FX-AS1Q4G0G2 97 aa9.56□□□□□ -0.88
ERCC2-201ENST00000391941 APOBP04114 4563 aaKnown RBP9.56□□□□□ -0.88
ERCC2-201ENST00000391941 HSPG2P98160 4391 aa9.55□□□□□ -0.88
ERCC2-201ENST00000391941 PKHD1L1Q86WI1 4243 aa9.55□□□□□ -0.88
ERCC2-201ENST00000391941 COX6B2Q6YFQ2 88 aa9.48□□□□□ -0.89
ERCC2-201ENST00000391941 KRTAP25-1Q3LHN0 102 aa9.47□□□□□ -0.89
ERCC2-201ENST00000391941 A0A0D9SG42 100 aa9.45□□□□□ -0.9
ERCC2-201ENST00000391941 KRTAP10-4P60372 401 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms