RNA–Protein interactions for RNA: ENST00000391611.6

PCNX4-202, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-202ENST00000391611 ZCCHC13Q8WW36 166 aaKnown RBP7.8□□□□□ -1.16
PCNX4-202ENST00000391611 LINC01558Q9Y6Z2 57 aa7.79□□□□□ -1.16
PCNX4-202ENST00000391611 PLAC8Q9NZF1 115 aa7.78□□□□□ -1.16
PCNX4-202ENST00000391611 LCA10Q71F78 164 aa7.78□□□□□ -1.16
PCNX4-202ENST00000391611 CSMD2Q7Z408 3487 aa7.77□□□□□ -1.17
PCNX4-202ENST00000391611 ZFHX3Q15911 3703 aa7.77□□□□□ -1.17
PCNX4-202ENST00000391611 A0A087X002 238 aa7.76□□□□□ -1.17
PCNX4-202ENST00000391611 NOTCH2NLQ7Z3S9 236 aa7.76□□□□□ -1.17
PCNX4-202ENST00000391611 PRAC1Q96KF2 57 aa7.75□□□□□ -1.17
PCNX4-202ENST00000391611 RBM12B-AS1Q9P1G2 102 aa7.75□□□□□ -1.17
PCNX4-202ENST00000391611 Q5W150 140 aa7.74□□□□□ -1.17
PCNX4-202ENST00000391611 PKD1L1Q8TDX9 2849 aa7.72□□□□□ -1.17
PCNX4-202ENST00000391611 A8MU10 97 aa7.69□□□□□ -1.18
PCNX4-202ENST00000391611 A0A0D9SG42 100 aa7.69□□□□□ -1.18
PCNX4-202ENST00000391611 VPS13CQ709C8 3753 aa7.68□□□□□ -1.18
PCNX4-202ENST00000391611 OTOGQ6ZRI0 2925 aa7.67□□□□□ -1.18
PCNX4-202ENST00000391611 KRTAP10-2P60368 255 aa7.67□□□□□ -1.18
PCNX4-202ENST00000391611 BSNQ9UPA5 3926 aa7.66□□□□□ -1.18
PCNX4-202ENST00000391611 SPINT4Q6UDR6 99 aa7.66□□□□□ -1.18
PCNX4-202ENST00000391611 LCE6AA0A183 80 aa7.64□□□□□ -1.19
PCNX4-202ENST00000391611 Q6ZR54 194 aa7.63□□□□□ -1.19
PCNX4-202ENST00000391611 LINC00483Q53H64 154 aa7.62□□□□□ -1.19
PCNX4-202ENST00000391611 KRTAP10-1P60331 282 aa7.61□□□□□ -1.19
PCNX4-202ENST00000391611 A0A1B0GU33 70 aa7.6□□□□□ -1.19
PCNX4-202ENST00000391611 TGP01266 2768 aa7.58□□□□□ -1.2
PCNX4-202ENST00000391611 TENM2Q9NT68 2774 aa7.58□□□□□ -1.2
PCNX4-202ENST00000391611 Q6ZRN7 208 aaPredicted RBP7.57□□□□□ -1.2
PCNX4-202ENST00000391611 NBPF19A0A087WUL8 3843 aa7.56□□□□□ -1.2
PCNX4-202ENST00000391611 DMAC1Q96GE9 116 aa7.55□□□□□ -1.2
PCNX4-202ENST00000391611 CRIPTQ9P021 101 aa7.54□□□□□ -1.2
PCNX4-202ENST00000391611 LINC01554Q52M75 96 aa7.53□□□□□ -1.2
PCNX4-202ENST00000391611 CSAG1Q6PB30 78 aa7.52□□□□□ -1.2
PCNX4-202ENST00000391611 KRTAP13-1Q8IUC0 172 aa7.51□□□□□ -1.21
PCNX4-202ENST00000391611 KRTAP13-2Q52LG2 175 aa7.41□□□□□ -1.22
PCNX4-202ENST00000391611 ADM2Q7Z4H4 148 aa7.4□□□□□ -1.22
PCNX4-202ENST00000391611 A6NN06 94 aa7.39□□□□□ -1.23
PCNX4-202ENST00000391611 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
PCNX4-202ENST00000391611 SRRM2Q9UQ35 2752 aaKnown RBP7.37□□□□□ -1.23
PCNX4-202ENST00000391611 COX6B2Q6YFQ2 88 aa7.37□□□□□ -1.23
PCNX4-202ENST00000391611 J3QL48 77 aa7.36□□□□□ -1.23
PCNX4-202ENST00000391611 Q6ZSA8 131 aa7.32□□□□□ -1.24
PCNX4-202ENST00000391611 TRRAPQ9Y4A5 3859 aa7.32□□□□□ -1.24
PCNX4-202ENST00000391611 ASB16-AS1Q495Z4 193 aa7.31□□□□□ -1.24
PCNX4-202ENST00000391611 FBN3Q75N90 2809 aa7.29□□□□□ -1.24
PCNX4-202ENST00000391611 H1FX-AS1Q4G0G2 97 aa7.28□□□□□ -1.24
PCNX4-202ENST00000391611 H3BS24 57 aa7.28□□□□□ -1.24
PCNX4-202ENST00000391611 S4R3F8 94 aa7.27□□□□□ -1.25
PCNX4-202ENST00000391611 RPL37P61927 97 aaKnown RBP7.24□□□□□ -1.25
PCNX4-202ENST00000391611 Q5VSD8 79 aa7.2□□□□□ -1.26
PCNX4-202ENST00000391611 ROMO1P60602 79 aa7.16□□□□□ -1.26
PCNX4-202ENST00000391611 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
PCNX4-202ENST00000391611 AKAP9Q99996 3911 aa7.13□□□□□ -1.27
PCNX4-202ENST00000391611 R4GN34 69 aa7.12□□□□□ -1.27
PCNX4-202ENST00000391611 KRTAP1-4P0C5Y4 121 aa7.11□□□□□ -1.27
PCNX4-202ENST00000391611 COL7A1Q02388 2944 aa7.09□□□□□ -1.27
PCNX4-202ENST00000391611 MEGF8Q7Z7M0 2845 aa7.07□□□□□ -1.28
PCNX4-202ENST00000391611 ZNF469Q96JG9 3925 aaPredicted RBP7.07□□□□□ -1.28
PCNX4-202ENST00000391611 KRTAP25-1Q3LHN0 102 aa7.06□□□□□ -1.28
PCNX4-202ENST00000391611 M0QZ58 72 aa7.05□□□□□ -1.28
PCNX4-202ENST00000391611 RPS29P62273 56 aaKnown RBP7.04□□□□□ -1.28
PCNX4-202ENST00000391611 ANK3Q12955 4377 aaKnown RBP7.04□□□□□ -1.28
PCNX4-202ENST00000391611 LUZP6Q538Z0 58 aa7.01□□□□□ -1.29
PCNX4-202ENST00000391611 A8MUU9 505 aa7□□□□□ -1.29
PCNX4-202ENST00000391611 KRTAP16-1A8MUX0 517 aa7□□□□□ -1.29
PCNX4-202ENST00000391611 C20orf166-AS1Q96NR2 134 aa6.97□□□□□ -1.29
PCNX4-202ENST00000391611 KRTAP13-3Q3SY46 172 aa6.96□□□□□ -1.3
PCNX4-202ENST00000391611 H0YAA0 97 aa6.94□□□□□ -1.3
PCNX4-202ENST00000391611 CSMD3Q7Z407 3707 aa6.94□□□□□ -1.3
PCNX4-202ENST00000391611 SEC61BP60468 96 aaKnown RBP6.92□□□□□ -1.3
PCNX4-202ENST00000391611 M0R2T5 61 aa6.91□□□□□ -1.3
PCNX4-202ENST00000391611 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
PCNX4-202ENST00000391611 NDUFAF8A1L188 74 aa6.82□□□□□ -1.32
PCNX4-202ENST00000391611 XP32Q5T750 250 aa6.77□□□□□ -1.33
PCNX4-202ENST00000391611 P0C880 135 aa6.74□□□□□ -1.33
PCNX4-202ENST00000391611 A0A0A0MQY5 61 aa6.66□□□□□ -1.34
PCNX4-202ENST00000391611 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
PCNX4-202ENST00000391611 PLAC4Q8WY50 150 aa6.55□□□□□ -1.36
PCNX4-202ENST00000391611 KRTAP21-3Q3LHN1 58 aa6.54□□□□□ -1.36
PCNX4-202ENST00000391611 KRTAP10-8P60410 259 aa6.53□□□□□ -1.36
PCNX4-202ENST00000391611 HUWE1Q7Z6Z7 4374 aaKnown RBP6.52□□□□□ -1.37
PCNX4-202ENST00000391611 A0A1B0GVY2 172 aa6.5□□□□□ -1.37
PCNX4-202ENST00000391611 KRTAP12-2P59991 146 aa6.47□□□□□ -1.37
PCNX4-202ENST00000391611 TPRXLQ17RH7 258 aa6.45□□□□□ -1.38
PCNX4-202ENST00000391611 TNP1P09430 55 aa6.44□□□□□ -1.38
PCNX4-202ENST00000391611 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
PCNX4-202ENST00000391611 KRTAP10-6P60371 365 aaPredicted RBP6.39□□□□□ -1.39
PCNX4-202ENST00000391611 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
PCNX4-202ENST00000391611 DNAH10Q8IVF4 4471 aa6.34□□□□□ -1.4
PCNX4-202ENST00000391611 ANK2Q01484 3957 aa6.33□□□□□ -1.4
PCNX4-202ENST00000391611 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
PCNX4-202ENST00000391611 PLECQ15149 4684 aaKnown RBP6.27□□□□□ -1.41
PCNX4-202ENST00000391611 DNAH9Q9NYC9 4486 aa6.25□□□□□ -1.41
PCNX4-202ENST00000391611 DNAH11Q96DT5 4516 aa6.25□□□□□ -1.41
PCNX4-202ENST00000391611 LYSTQ99698 3801 aa6.24□□□□□ -1.41
PCNX4-202ENST00000391611 KRTAP3-3Q9BYR6 98 aa6.23□□□□□ -1.41
PCNX4-202ENST00000391611 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.41
PCNX4-202ENST00000391611 DNAH1Q9P2D7 4330 aa6.18□□□□□ -1.42
PCNX4-202ENST00000391611 KRTAP10-4P60372 401 aaPredicted RBP6.17□□□□□ -1.42
PCNX4-202ENST00000391611 DNHD1Q96M86 4753 aa6.17□□□□□ -1.42
PCNX4-202ENST00000391611 KRTAP10-10P60014 251 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms