RNA–Protein interactions for RNA: ENST00000389858.4

LGR4-202, Transcript of leucine rich repeat containing G protein-coupled receptor 4, humanhuman

TSL 1 (best) BASIC

Gene LGR4, Length 5,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR4-202ENST00000389858 SPATA8Q6RVD6 105 aa11.8□□□□□ -0.52
LGR4-202ENST00000389858 KMT2BQ9UMN6 2715 aaPredicted RBP11.79□□□□□ -0.52
LGR4-202ENST00000389858 ZZEF1O43149 2961 aa11.79□□□□□ -0.52
LGR4-202ENST00000389858 KRTAP13-1Q8IUC0 172 aa11.77□□□□□ -0.52
LGR4-202ENST00000389858 KRTAP13-2Q52LG2 175 aa11.76□□□□□ -0.53
LGR4-202ENST00000389858 TENM4Q6N022 2769 aa11.76□□□□□ -0.53
LGR4-202ENST00000389858 NIPBLQ6KC79 2804 aaeCLIP11.72□□□□□ -0.53
LGR4-202ENST00000389858 EYSQ5T1H1 3165 aa11.72□□□□□ -0.53
LGR4-202ENST00000389858 PLAC4Q8WY50 150 aa11.72□□□□□ -0.53
LGR4-202ENST00000389858 APCP25054 2843 aa11.7□□□□□ -0.54
LGR4-202ENST00000389858 KRTAP21-3Q3LHN1 58 aa11.61□□□□□ -0.55
LGR4-202ENST00000389858 SPTBN5Q9NRC6 3674 aaKnown RBP11.6□□□□□ -0.55
LGR4-202ENST00000389858 A0A0A0MQY5 61 aa11.6□□□□□ -0.55
LGR4-202ENST00000389858 CELSR2Q9HCU4 2923 aa11.57□□□□□ -0.56
LGR4-202ENST00000389858 ZANQ9Y493 2812 aa11.57□□□□□ -0.56
LGR4-202ENST00000389858 A8MUU9 505 aa11.53□□□□□ -0.56
LGR4-202ENST00000389858 LOC400499M0QZD8 3231 aa11.52□□□□□ -0.56
LGR4-202ENST00000389858 CRYBG3Q68DQ2 2970 aa11.51□□□□□ -0.57
LGR4-202ENST00000389858 DMXL1Q9Y485 3027 aa11.49□□□□□ -0.57
LGR4-202ENST00000389858 A8MU10 97 aa11.47□□□□□ -0.57
LGR4-202ENST00000389858 H3BS24 57 aa11.46□□□□□ -0.57
LGR4-202ENST00000389858 DCHS2Q6V1P9 2916 aa11.42□□□□□ -0.58
LGR4-202ENST00000389858 USP34Q70CQ2 3546 aa11.41□□□□□ -0.58
LGR4-202ENST00000389858 MYO15AQ9UKN7 3530 aa11.41□□□□□ -0.58
LGR4-202ENST00000389858 C20orf166-AS1Q96NR2 134 aa11.41□□□□□ -0.58
LGR4-202ENST00000389858 TNRC18O15417 2968 aaPredicted RBP11.34□□□□□ -0.59
LGR4-202ENST00000389858 A6NN06 94 aa11.32□□□□□ -0.6
LGR4-202ENST00000389858 NF1P21359 2839 aa11.3□□□□□ -0.6
LGR4-202ENST00000389858 FBN2P35556 2912 aa11.28□□□□□ -0.6
LGR4-202ENST00000389858 HRNRQ86YZ3 2850 aaPredicted RBP11.28□□□□□ -0.6
LGR4-202ENST00000389858 KRTAP25-1Q3LHN0 102 aa11.28□□□□□ -0.6
LGR4-202ENST00000389858 KRTAP1-4P0C5Y4 121 aa11.22□□□□□ -0.61
LGR4-202ENST00000389858 TENM3Q9P273 2699 aa11.21□□□□□ -0.61
LGR4-202ENST00000389858 XP32Q5T750 250 aa11.11□□□□□ -0.63
LGR4-202ENST00000389858 TENM1Q9UKZ4 2725 aa11.1□□□□□ -0.63
LGR4-202ENST00000389858 TNP1P09430 55 aa11.08□□□□□ -0.63
LGR4-202ENST00000389858 WDFY3Q8IZQ1 3526 aa11.03□□□□□ -0.64
LGR4-202ENST00000389858 RELNP78509 3460 aa10.98□□□□□ -0.65
LGR4-202ENST00000389858 MXRA5Q9NR99 2828 aa10.96□□□□□ -0.65
LGR4-202ENST00000389858 TPRXLQ17RH7 258 aa10.91□□□□□ -0.66
LGR4-202ENST00000389858 TENM2Q9NT68 2774 aa10.91□□□□□ -0.66
LGR4-202ENST00000389858 DCHS1Q96JQ0 3298 aa10.91□□□□□ -0.66
LGR4-202ENST00000389858 KRTAP16-1A8MUX0 517 aa10.87□□□□□ -0.67
LGR4-202ENST00000389858 A0A1B0GVY2 172 aa10.83□□□□□ -0.68
LGR4-202ENST00000389858 NDUFAF8A1L188 74 aa10.82□□□□□ -0.68
LGR4-202ENST00000389858 ASPMQ8IZT6 3477 aa10.8□□□□□ -0.68
LGR4-202ENST00000389858 KRTAP10-8P60410 259 aa10.8□□□□□ -0.68
LGR4-202ENST00000389858 C10orf95Q9H7T3 257 aa10.77□□□□□ -0.69
LGR4-202ENST00000389858 ZFHX4Q86UP3 3567 aa10.76□□□□□ -0.69
LGR4-202ENST00000389858 CELSR1Q9NYQ6 3014 aa10.76□□□□□ -0.69
LGR4-202ENST00000389858 LAMA5O15230 3695 aa10.76□□□□□ -0.69
LGR4-202ENST00000389858 PP632Q6XCG6 107 aa10.75□□□□□ -0.69
LGR4-202ENST00000389858 KRTAP13-3Q3SY46 172 aa10.75□□□□□ -0.69
LGR4-202ENST00000389858 PKD1L1Q8TDX9 2849 aa10.73□□□□□ -0.69
LGR4-202ENST00000389858 H0YAA0 97 aa10.72□□□□□ -0.69
LGR4-202ENST00000389858 TGP01266 2768 aa10.66□□□□□ -0.7
LGR4-202ENST00000389858 KRTAP10-10P60014 251 aa10.63□□□□□ -0.71
LGR4-202ENST00000389858 MUC3AQ02505 3323 aa10.61□□□□□ -0.71
LGR4-202ENST00000389858 P0C880 135 aa10.56□□□□□ -0.72
LGR4-202ENST00000389858 VWFP04275 2813 aa10.54□□□□□ -0.72
LGR4-202ENST00000389858 DMDP11532 3685 aa10.51□□□□□ -0.73
LGR4-202ENST00000389858 CSMD1Q96PZ7 3565 aa10.5□□□□□ -0.73
LGR4-202ENST00000389858 PDZD2O15018 2839 aa10.48□□□□□ -0.73
LGR4-202ENST00000389858 PRO2289Q9P1D8 64 aa10.45□□□□□ -0.74
LGR4-202ENST00000389858 SMG1Q96Q15 3661 aaKnown RBP10.41□□□□□ -0.74
LGR4-202ENST00000389858 FBN1P35555 2871 aaKnown RBP10.38□□□□□ -0.75
LGR4-202ENST00000389858 SVEP1Q4LDE5 3571 aa10.25□□□□□ -0.77
LGR4-202ENST00000389858 CUBNO60494 3623 aa10.22□□□□□ -0.77
LGR4-202ENST00000389858 SRRM2Q9UQ35 2752 aaKnown RBP10.18□□□□□ -0.78
LGR4-202ENST00000389858 OTOGQ6ZRI0 2925 aa10.16□□□□□ -0.78
LGR4-202ENST00000389858 NBPF19A0A087WUL8 3843 aa10.12□□□□□ -0.79
LGR4-202ENST00000389858 KRTAP12-2P59991 146 aa10.1□□□□□ -0.79
LGR4-202ENST00000389858 ZFHX3Q15911 3703 aa10.05□□□□□ -0.8
LGR4-202ENST00000389858 KRTAP3-1Q9BYR8 98 aa10□□□□□ -0.81
LGR4-202ENST00000389858 CSMD2Q7Z408 3487 aa9.96□□□□□ -0.81
LGR4-202ENST00000389858 KRTAP13-4Q3LI77 160 aa9.96□□□□□ -0.81
LGR4-202ENST00000389858 KRTAP12-1P59990 96 aa9.95□□□□□ -0.82
LGR4-202ENST00000389858 FBN3Q75N90 2809 aa9.93□□□□□ -0.82
LGR4-202ENST00000389858 SPENQ96T58 3664 aaKnown RBP9.89□□□□□ -0.83
LGR4-202ENST00000389858 MEGF8Q7Z7M0 2845 aa9.77□□□□□ -0.85
LGR4-202ENST00000389858 COL7A1Q02388 2944 aa9.72□□□□□ -0.85
LGR4-202ENST00000389858 ANK3Q12955 4377 aaKnown RBP9.71□□□□□ -0.86
LGR4-202ENST00000389858 TRRAPQ9Y4A5 3859 aa9.7□□□□□ -0.86
LGR4-202ENST00000389858 KRTAP10-6P60371 365 aaPredicted RBP9.7□□□□□ -0.86
LGR4-202ENST00000389858 MT1HL1P0DM35 61 aa9.67□□□□□ -0.86
LGR4-202ENST00000389858 BSNQ9UPA5 3926 aa9.56□□□□□ -0.88
LGR4-202ENST00000389858 KRTAP15-1Q3LI76 137 aa9.53□□□□□ -0.88
LGR4-202ENST00000389858 KRTAP10-4P60372 401 aaPredicted RBP9.41□□□□□ -0.9
LGR4-202ENST00000389858 KRTAP3-3Q9BYR6 98 aa9.36□□□□□ -0.91
LGR4-202ENST00000389858 KRTAP3-2Q9BYR7 98 aa9.35□□□□□ -0.91
LGR4-202ENST00000389858 KRTAP4-5Q9BYR2 181 aa9.34□□□□□ -0.92
LGR4-202ENST00000389858 VPS13CQ709C8 3753 aa9.3□□□□□ -0.92
LGR4-202ENST00000389858 KRTAP10-12P60413 245 aa9.19□□□□□ -0.94
LGR4-202ENST00000389858 HUWE1Q7Z6Z7 4374 aaKnown RBP9.17□□□□□ -0.94
LGR4-202ENST00000389858 CSMD3Q7Z407 3707 aa9.01□□□□□ -0.97
LGR4-202ENST00000389858 ZNF469Q96JG9 3925 aaPredicted RBP8.95□□□□□ -0.98
LGR4-202ENST00000389858 CRCT1Q9UGL9 99 aa8.93□□□□□ -0.98
LGR4-202ENST00000389858 KRTAP12-3P60328 96 aa8.93□□□□□ -0.98
LGR4-202ENST00000389858 ALMS1Q8TCU4 4167 aa8.92□□□□□ -0.98
LGR4-202ENST00000389858 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms