RNA–Protein interactions for RNA: ENST00000389858.4

LGR4-202, Transcript of leucine rich repeat containing G protein-coupled receptor 4, humanhuman

TSL 1 (best) BASIC

Gene LGR4, Length 5,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR4-202ENST00000389858 NCBP2P52298 156 aaKnown RBP eCLIP20.29■□□□□ 0.846e-18■■□□□ 12.4
LGR4-202ENST00000389858 EIF3HO15372 352 aaKnown RBP eCLIP21.59■■□□□ 1.051e-14■□□□□ 8.7
LGR4-202ENST00000389858 HNRNPMP52272 730 aaKnown RBP eCLIP26.41■■□□□ 1.824e-12■■■■■ 40.4
LGR4-202ENST00000389858 CSTF2P33240 577 aaKnown RBP eCLIP20.11■□□□□ 0.811e-11■■■■□ 20.2
LGR4-202ENST00000389858 FUBP3Q96I24 572 aaKnown RBP eCLIP20.59■□□□□ 0.892e-11■■■■■ 49.7
LGR4-202ENST00000389858 MATR3P43243 847 aaKnown RBP eCLIP24.11■■□□□ 1.454e-11■■■■□ 24.5
LGR4-202ENST00000389858 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.05■■□□□ 1.761e-9■■□□□ 13.1
LGR4-202ENST00000389858 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.77■□□□□ 0.281e-9■■■■■ 33.4
LGR4-202ENST00000389858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.14■■■□□ 2.12e-9■■■□□ 16.6
LGR4-202ENST00000389858 DDX6P26196 483 aaKnown RBP eCLIP20.35■□□□□ 0.853e-9■■■■■ 36.7
LGR4-202ENST00000389858 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.47■■□□□ 1.198e-9■■□□□ 12.9
LGR4-202ENST00000389858 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.9■□□□□ 0.788e-9■■■■■ 38.1
LGR4-202ENST00000389858 ZNF622Q969S3 477 aaKnown RBP eCLIP23.9■■□□□ 1.421e-8■□□□□ 8.5
LGR4-202ENST00000389858 TRA2AQ13595 282 aaKnown RBP eCLIP18.72■□□□□ 0.592e-8■□□□□ 8.2
LGR4-202ENST00000389858 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.64■■□□□ 1.372e-8■■□□□ 11.6
LGR4-202ENST00000389858 RPS3P23396 243 aaKnown RBP eCLIP19.8■□□□□ 0.763e-8■■□□□ 13.9
LGR4-202ENST00000389858 DDX3XO00571 662 aaKnown RBP eCLIP21.29■■□□□ 14e-8■■■■■ 30.5
LGR4-202ENST00000389858 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.06■■□□□ 1.124e-8■■■■□ 21.5
LGR4-202ENST00000389858 ILF3Q12906 894 aaKnown RBP eCLIP20.53■□□□□ 0.887e-8■■■□□ 14.9
LGR4-202ENST00000389858 TIA1P31483 386 aaKnown RBP eCLIP19.96■□□□□ 0.797e-8■■■■□ 22.5
LGR4-202ENST00000389858 HNRNPLP14866 589 aaKnown RBP eCLIP20.8■□□□□ 0.921e-7■■□□□ 13.4
LGR4-202ENST00000389858 PTBP1P26599 531 aaKnown RBP eCLIP18.9■□□□□ 0.621e-7■■■■■ 34.6
LGR4-202ENST00000389858 UPF1Q92900 1129 aaKnown RBP eCLIP20.73■□□□□ 0.912e-7■■■■□ 22.8
LGR4-202ENST00000389858 TROVE2P10155 538 aaKnown RBP eCLIP22.58■■□□□ 1.212e-7■□□□□ 11.1
LGR4-202ENST00000389858 NKRFO15226 690 aaKnown RBP eCLIP21.48■■□□□ 1.032e-7■■□□□ 11.4
LGR4-202ENST00000389858 KHSRPQ92945 711 aaKnown RBP eCLIP19.36■□□□□ 0.693e-7■■■□□ 18
LGR4-202ENST00000389858 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.04■■□□□ 1.284e-7■□□□□ 10.8
LGR4-202ENST00000389858 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.93■□□□□ 0.785e-7■■■■■ 29.9
LGR4-202ENST00000389858 U2AF2P26368 475 aaKnown RBP eCLIP22.95■■□□□ 1.265e-7■■■■□ 22.7
LGR4-202ENST00000389858 TARDBPQ13148 414 aaKnown RBP eCLIP20.25■□□□□ 0.836e-7■■□□□ 12.6
LGR4-202ENST00000389858 RBFOX2O43251 390 aaKnown RBP eCLIP17.34■□□□□ 0.376e-7■■■■□ 24
LGR4-202ENST00000389858 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.82■■□□□ 1.086e-7■■□□□ 12.8
LGR4-202ENST00000389858 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.41■■□□□ 1.57e-7■■■■■ 100.3
LGR4-202ENST00000389858 QKIQ96PU8 341 aaKnown RBP eCLIP20.73■□□□□ 0.917e-7■■■■□ 19.6
LGR4-202ENST00000389858 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.99■□□□□ 0.951e-6■■■□□ 18.1
LGR4-202ENST00000389858 EFTUD2Q15029 972 aaKnown RBP eCLIP21.8■■□□□ 1.081e-6■■■■□ 23.6
LGR4-202ENST00000389858 XRCC6P12956 609 aaKnown RBP eCLIP23.46■■□□□ 1.352e-6■■■■■ 34.5
LGR4-202ENST00000389858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.95■■□□□ 1.262e-6■□□□□ 8.9
LGR4-202ENST00000389858 PPIGQ13427 754 aaKnown RBP eCLIP20.62■□□□□ 0.892e-6■■■■□ 19.6
LGR4-202ENST00000389858 AQRO60306 1485 aaKnown RBP eCLIP25.56■■□□□ 1.682e-6■■■■□ 26.6
LGR4-202ENST00000389858 SFPQP23246 707 aaKnown RBP eCLIP24.08■■□□□ 1.452e-6■□□□□ 10.4
LGR4-202ENST00000389858 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.26■■□□□ 1.152e-6■■■■■ 41.9
LGR4-202ENST00000389858 SF3A3Q12874 501 aaKnown RBP eCLIP22.58■■□□□ 1.212e-6■■□□□ 13.6
LGR4-202ENST00000389858 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.78■■□□□ 1.562e-6■■■■□ 25.6
LGR4-202ENST00000389858 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.02■□□□□ 0.963e-6■■■■□ 19.7
LGR4-202ENST00000389858 SF3B4Q15427 424 aaKnown RBP eCLIP19.42■□□□□ 0.73e-6■■■■□ 26
LGR4-202ENST00000389858 SF3B1O75533 1304 aaKnown RBP eCLIP21.07■□□□□ 0.964e-6■■■■■ 33.3
LGR4-202ENST00000389858 FTOQ9C0B1 505 aaKnown RBP eCLIP22.61■■□□□ 1.214e-6■□□□□ 10.4
LGR4-202ENST00000389858 PCBP2Q15366 365 aaKnown RBP eCLIP20.12■□□□□ 0.815e-6■■□□□ 12.3
LGR4-202ENST00000389858 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.07■□□□□ 0.87e-6■■□□□ 14.4
LGR4-202ENST00000389858 RBM15Q96T37 977 aaKnown RBP eCLIP21.79■■□□□ 1.087e-6■□□□□ 10
LGR4-202ENST00000389858 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.21■■□□□ 1.317e-6■□□□□ 10.3
LGR4-202ENST00000389858 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.8■□□□□ 0.768e-6■□□□□ 11.3
LGR4-202ENST00000389858 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.74■■□□□ 1.071e-5■□□□□ 8.9
Retrieved 54 of 54 RNA–protein pairs in 12.8 ms