RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 KRTAP11-1Q8IUC1 163 aa7.6□□□□□ -1.19
DNMT3A-204ENST00000380756 RBM12B-AS1Q9P1G2 102 aa7.59□□□□□ -1.19
DNMT3A-204ENST00000380756 Q6ZR54 194 aa7.58□□□□□ -1.2
DNMT3A-204ENST00000380756 CSMD1Q96PZ7 3565 aa7.58□□□□□ -1.2
DNMT3A-204ENST00000380756 CELSR1Q9NYQ6 3014 aa7.57□□□□□ -1.2
DNMT3A-204ENST00000380756 SVEP1Q4LDE5 3571 aa7.54□□□□□ -1.2
DNMT3A-204ENST00000380756 TENM3Q9P273 2699 aa7.54□□□□□ -1.2
DNMT3A-204ENST00000380756 A0A087X002 238 aa7.51□□□□□ -1.21
DNMT3A-204ENST00000380756 NOTCH2NLQ7Z3S9 236 aa7.51□□□□□ -1.21
DNMT3A-204ENST00000380756 SPINT4Q6UDR6 99 aa7.51□□□□□ -1.21
DNMT3A-204ENST00000380756 DMAC1Q96GE9 116 aa7.5□□□□□ -1.21
DNMT3A-204ENST00000380756 A0A1B0GU33 70 aa7.49□□□□□ -1.21
DNMT3A-204ENST00000380756 PRAC1Q96KF2 57 aa7.49□□□□□ -1.21
DNMT3A-204ENST00000380756 A0A0D9SG42 100 aa7.47□□□□□ -1.21
DNMT3A-204ENST00000380756 KRTAP10-2P60368 255 aa7.46□□□□□ -1.21
DNMT3A-204ENST00000380756 Q6ZRN7 208 aaPredicted RBP7.46□□□□□ -1.21
DNMT3A-204ENST00000380756 SPENQ96T58 3664 aaKnown RBP7.45□□□□□ -1.22
DNMT3A-204ENST00000380756 CRIPTQ9P021 101 aa7.44□□□□□ -1.22
DNMT3A-204ENST00000380756 H3BS24 57 aa7.44□□□□□ -1.22
DNMT3A-204ENST00000380756 KRTAP10-1P60331 282 aa7.44□□□□□ -1.22
DNMT3A-204ENST00000380756 KRTAP13-1Q8IUC0 172 aa7.44□□□□□ -1.22
DNMT3A-204ENST00000380756 LINC01554Q52M75 96 aa7.42□□□□□ -1.22
DNMT3A-204ENST00000380756 TENM1Q9UKZ4 2725 aa7.42□□□□□ -1.22
DNMT3A-204ENST00000380756 PKD1L1Q8TDX9 2849 aa7.41□□□□□ -1.22
DNMT3A-204ENST00000380756 COX6B2Q6YFQ2 88 aa7.39□□□□□ -1.23
DNMT3A-204ENST00000380756 VWFP04275 2813 aa7.38□□□□□ -1.23
DNMT3A-204ENST00000380756 PDZD2O15018 2839 aa7.38□□□□□ -1.23
DNMT3A-204ENST00000380756 A8MU10 97 aa7.36□□□□□ -1.23
DNMT3A-204ENST00000380756 ASB16-AS1Q495Z4 193 aa7.35□□□□□ -1.23
DNMT3A-204ENST00000380756 CSAG1Q6PB30 78 aa7.34□□□□□ -1.23
DNMT3A-204ENST00000380756 Q5VSD8 79 aa7.33□□□□□ -1.24
DNMT3A-204ENST00000380756 FBN1P35555 2871 aaKnown RBP7.29□□□□□ -1.24
DNMT3A-204ENST00000380756 A6NN06 94 aa7.29□□□□□ -1.24
DNMT3A-204ENST00000380756 BSNQ9UPA5 3926 aa7.28□□□□□ -1.24
DNMT3A-204ENST00000380756 SPATA8Q6RVD6 105 aa7.28□□□□□ -1.24
DNMT3A-204ENST00000380756 KRTAP13-2Q52LG2 175 aa7.25□□□□□ -1.25
DNMT3A-204ENST00000380756 Q6ZSA8 131 aa7.24□□□□□ -1.25
DNMT3A-204ENST00000380756 OTOGQ6ZRI0 2925 aa7.22□□□□□ -1.25
DNMT3A-204ENST00000380756 CSMD2Q7Z408 3487 aa7.22□□□□□ -1.25
DNMT3A-204ENST00000380756 H1FX-AS1Q4G0G2 97 aa7.2□□□□□ -1.26
DNMT3A-204ENST00000380756 S4R3F8 94 aa7.2□□□□□ -1.26
DNMT3A-204ENST00000380756 SRRM2Q9UQ35 2752 aaKnown RBP7.19□□□□□ -1.26
DNMT3A-204ENST00000380756 TGP01266 2768 aa7.17□□□□□ -1.26
DNMT3A-204ENST00000380756 RPL37P61927 97 aaKnown RBP7.17□□□□□ -1.26
DNMT3A-204ENST00000380756 RPS29P62273 56 aaKnown RBP7.13□□□□□ -1.27
DNMT3A-204ENST00000380756 TENM2Q9NT68 2774 aa7.12□□□□□ -1.27
DNMT3A-204ENST00000380756 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
DNMT3A-204ENST00000380756 ROMO1P60602 79 aa7.09□□□□□ -1.27
DNMT3A-204ENST00000380756 VPS13CQ709C8 3753 aa7.06□□□□□ -1.28
DNMT3A-204ENST00000380756 CAMK2N1Q7Z7J9 78 aa7.05□□□□□ -1.28
DNMT3A-204ENST00000380756 NBPF19A0A087WUL8 3843 aa7.05□□□□□ -1.28
DNMT3A-204ENST00000380756 ZFHX3Q15911 3703 aa7.04□□□□□ -1.28
DNMT3A-204ENST00000380756 M0R2T5 61 aa7.03□□□□□ -1.28
DNMT3A-204ENST00000380756 SEC61BP60468 96 aaKnown RBP7.03□□□□□ -1.28
DNMT3A-204ENST00000380756 R4GN34 69 aa7.02□□□□□ -1.29
DNMT3A-204ENST00000380756 KRTAP1-4P0C5Y4 121 aa6.99□□□□□ -1.29
DNMT3A-204ENST00000380756 LUZP6Q538Z0 58 aa6.97□□□□□ -1.29
DNMT3A-204ENST00000380756 KRTAP25-1Q3LHN0 102 aa6.96□□□□□ -1.29
DNMT3A-204ENST00000380756 A8MUU9 505 aa6.96□□□□□ -1.3
DNMT3A-204ENST00000380756 C20orf166-AS1Q96NR2 134 aa6.94□□□□□ -1.3
DNMT3A-204ENST00000380756 M0QZ58 72 aa6.93□□□□□ -1.3
DNMT3A-204ENST00000380756 KRTAP16-1A8MUX0 517 aa6.9□□□□□ -1.3
DNMT3A-204ENST00000380756 FBN3Q75N90 2809 aa6.87□□□□□ -1.31
DNMT3A-204ENST00000380756 KRTAP13-3Q3SY46 172 aa6.87□□□□□ -1.31
DNMT3A-204ENST00000380756 TRRAPQ9Y4A5 3859 aa6.83□□□□□ -1.32
DNMT3A-204ENST00000380756 H0YAA0 97 aa6.8□□□□□ -1.32
DNMT3A-204ENST00000380756 ZNF469Q96JG9 3925 aaPredicted RBP6.75□□□□□ -1.33
DNMT3A-204ENST00000380756 ANK3Q12955 4377 aaKnown RBP6.74□□□□□ -1.33
DNMT3A-204ENST00000380756 MEGF8Q7Z7M0 2845 aa6.71□□□□□ -1.33
DNMT3A-204ENST00000380756 COL7A1Q02388 2944 aa6.71□□□□□ -1.34
DNMT3A-204ENST00000380756 XP32Q5T750 250 aa6.67□□□□□ -1.34
DNMT3A-204ENST00000380756 A0A0A0MQY5 61 aa6.67□□□□□ -1.34
DNMT3A-204ENST00000380756 NDUFAF8A1L188 74 aa6.62□□□□□ -1.35
DNMT3A-204ENST00000380756 C10orf95Q9H7T3 257 aa6.6□□□□□ -1.35
DNMT3A-204ENST00000380756 A0A1B0GVY2 172 aa6.56□□□□□ -1.36
DNMT3A-204ENST00000380756 P0C880 135 aa6.55□□□□□ -1.36
DNMT3A-204ENST00000380756 PLAC4Q8WY50 150 aa6.5□□□□□ -1.37
DNMT3A-204ENST00000380756 KRTAP3-1Q9BYR8 98 aa6.46□□□□□ -1.37
DNMT3A-204ENST00000380756 KRTAP10-8P60410 259 aa6.46□□□□□ -1.38
DNMT3A-204ENST00000380756 TPRXLQ17RH7 258 aa6.45□□□□□ -1.38
DNMT3A-204ENST00000380756 AKAP9Q99996 3911 aa6.42□□□□□ -1.38
DNMT3A-204ENST00000380756 TNP1P09430 55 aa6.4□□□□□ -1.39
DNMT3A-204ENST00000380756 CSMD3Q7Z407 3707 aa6.35□□□□□ -1.39
DNMT3A-204ENST00000380756 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
DNMT3A-204ENST00000380756 KRTAP12-2P59991 146 aa6.31□□□□□ -1.4
DNMT3A-204ENST00000380756 HUWE1Q7Z6Z7 4374 aaKnown RBP6.27□□□□□ -1.41
DNMT3A-204ENST00000380756 KRTAP10-6P60371 365 aaPredicted RBP6.26□□□□□ -1.41
DNMT3A-204ENST00000380756 KRTAP12-1P59990 96 aa6.25□□□□□ -1.41
DNMT3A-204ENST00000380756 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
DNMT3A-204ENST00000380756 KRTAP3-3Q9BYR6 98 aa6.09□□□□□ -1.43
DNMT3A-204ENST00000380756 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
DNMT3A-204ENST00000380756 KRTAP10-4P60372 401 aaPredicted RBP6.07□□□□□ -1.44
DNMT3A-204ENST00000380756 KRTAP10-10P60014 251 aa6.04□□□□□ -1.44
DNMT3A-204ENST00000380756 DNAH9Q9NYC9 4486 aa6.02□□□□□ -1.45
DNMT3A-204ENST00000380756 MT1HL1P0DM35 61 aa6.01□□□□□ -1.45
DNMT3A-204ENST00000380756 KRTAP4-5Q9BYR2 181 aa5.97□□□□□ -1.45
DNMT3A-204ENST00000380756 PLECQ15149 4684 aaKnown RBP5.97□□□□□ -1.45
DNMT3A-204ENST00000380756 DNAH10Q8IVF4 4471 aa5.95□□□□□ -1.46
DNMT3A-204ENST00000380756 DNHD1Q96M86 4753 aa5.94□□□□□ -1.46
DNMT3A-204ENST00000380756 DNAH1Q9P2D7 4330 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms