RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 C1orf195Q5TG92 126 aa10.76□□□□□ -0.69
SF1-203ENST00000377387 PLAC8Q9NZF1 115 aa10.76□□□□□ -0.69
SF1-203ENST00000377387 DNAH11Q96DT5 4516 aa10.76□□□□□ -0.69
SF1-203ENST00000377387 PRR15LQ9BU68 103 aa10.75□□□□□ -0.69
SF1-203ENST00000377387 TP53AIP1Q9HCN2 124 aa10.75□□□□□ -0.69
SF1-203ENST00000377387 IGLV7-46A0A075B6I9 117 aa10.75□□□□□ -0.69
SF1-203ENST00000377387 ASB16-AS1Q495Z4 193 aa10.74□□□□□ -0.69
SF1-203ENST00000377387 MRPL34Q9BQ48 92 aaKnown RBP10.74□□□□□ -0.69
SF1-203ENST00000377387 Q5VV11 94 aa10.74□□□□□ -0.69
SF1-203ENST00000377387 LY6G6CO95867 125 aa10.74□□□□□ -0.69
SF1-203ENST00000377387 V9GYY9 64 aa10.73□□□□□ -0.69
SF1-203ENST00000377387 CHKB-CPT1BH3BT56 60 aa10.73□□□□□ -0.69
SF1-203ENST00000377387 Q6ZR54 194 aa10.72□□□□□ -0.69
SF1-203ENST00000377387 HYDINQ4G0P3 5121 aa10.71□□□□□ -0.69
SF1-203ENST00000377387 C1orf134Q5TEV5 83 aa10.71□□□□□ -0.69
SF1-203ENST00000377387 IGLV7-43P04211 117 aa10.68□□□□□ -0.7
SF1-203ENST00000377387 DNAH5Q8TE73 4624 aa10.68□□□□□ -0.7
SF1-203ENST00000377387 SPAG11AQ6PDA7 123 aa10.67□□□□□ -0.7
SF1-203ENST00000377387 LIMD2Q9BT23 127 aa10.66□□□□□ -0.7
SF1-203ENST00000377387 Q5W150 140 aa10.65□□□□□ -0.7
SF1-203ENST00000377387 RETNLBQ9BQ08 111 aa10.64□□□□□ -0.71
SF1-203ENST00000377387 KRTAP10-2P60368 255 aa10.61□□□□□ -0.71
SF1-203ENST00000377387 ALMS1Q8TCU4 4167 aa10.6□□□□□ -0.71
SF1-203ENST00000377387 HRES1P13985 223 aa10.6□□□□□ -0.71
SF1-203ENST00000377387 LRP1BQ9NZR2 4599 aa10.59□□□□□ -0.71
SF1-203ENST00000377387 A6NED7 52 aa10.58□□□□□ -0.72
SF1-203ENST00000377387 SPTSSBQ8NFR3 76 aa10.57□□□□□ -0.72
SF1-203ENST00000377387 PRR26Q8N8Z3 221 aa10.53□□□□□ -0.72
SF1-203ENST00000377387 PMAIP1Q13794 54 aa10.53□□□□□ -0.72
SF1-203ENST00000377387 LOC101927531A0A1B0GV80 90 aa10.51□□□□□ -0.73
SF1-203ENST00000377387 LCA10Q71F78 164 aa10.51□□□□□ -0.73
SF1-203ENST00000377387 SSBP3-AS1Q7Z2R9 100 aa10.5□□□□□ -0.73
SF1-203ENST00000377387 Q75L30 129 aa10.49□□□□□ -0.73
SF1-203ENST00000377387 LINC00313P59037 77 aa10.48□□□□□ -0.73
SF1-203ENST00000377387 FAT2Q9NYQ8 4349 aa10.47□□□□□ -0.73
SF1-203ENST00000377387 KRTAP13-3Q3SY46 172 aa10.47□□□□□ -0.73
SF1-203ENST00000377387 KRTAP13-2Q52LG2 175 aa10.47□□□□□ -0.73
SF1-203ENST00000377387 LINC01558Q9Y6Z2 57 aa10.46□□□□□ -0.74
SF1-203ENST00000377387 PKD1P98161 4303 aa10.45□□□□□ -0.74
SF1-203ENST00000377387 KRTAP10-1P60331 282 aa10.44□□□□□ -0.74
SF1-203ENST00000377387 PKHD1P08F94 4074 aa10.43□□□□□ -0.74
SF1-203ENST00000377387 SPINK7P58062 85 aa10.42□□□□□ -0.74
SF1-203ENST00000377387 VPS13BQ7Z7G8 4022 aa10.41□□□□□ -0.74
SF1-203ENST00000377387 C8orf87E5RJ46 101 aa10.41□□□□□ -0.74
SF1-203ENST00000377387 ACYP2P14621 99 aa10.37□□□□□ -0.75
SF1-203ENST00000377387 FAM229AH3BQW9 127 aa10.34□□□□□ -0.75
SF1-203ENST00000377387 CDC42SE1Q9NRR8 79 aa10.34□□□□□ -0.75
SF1-203ENST00000377387 IGKV2D-30A0A075B6S6 120 aa10.33□□□□□ -0.76
SF1-203ENST00000377387 IGKV2-30P06310 120 aa10.33□□□□□ -0.76
SF1-203ENST00000377387 ATP11AUNQ6ZP68 121 aa10.32□□□□□ -0.76
SF1-203ENST00000377387 PLA2G1BP04054 148 aaKnown RBP10.29□□□□□ -0.76
SF1-203ENST00000377387 KRTAP1-4P0C5Y4 121 aa10.29□□□□□ -0.76
SF1-203ENST00000377387 Q6ZSA8 131 aa10.28□□□□□ -0.76
SF1-203ENST00000377387 SACSQ9NZJ4 4579 aa10.28□□□□□ -0.76
SF1-203ENST00000377387 SEC61GP60059 68 aa10.27□□□□□ -0.77
SF1-203ENST00000377387 C4orf48Q5BLP8 95 aa10.27□□□□□ -0.77
SF1-203ENST00000377387 DMAC1Q96GE9 116 aa10.27□□□□□ -0.77
SF1-203ENST00000377387 KRTAP16-1A8MUX0 517 aa10.26□□□□□ -0.77
SF1-203ENST00000377387 TYMSOSQ8TAI1 123 aa10.24□□□□□ -0.77
SF1-203ENST00000377387 FAT1Q14517 4588 aa10.23□□□□□ -0.77
SF1-203ENST00000377387 A6NN06 94 aa10.2□□□□□ -0.78
SF1-203ENST00000377387 KTN1-AS1Q86SY8 53 aa10.18□□□□□ -0.78
SF1-203ENST00000377387 A0A1B0GU69 56 aa10.17□□□□□ -0.78
SF1-203ENST00000377387 SMR3BP02814 79 aaPredicted RBP10.17□□□□□ -0.78
SF1-203ENST00000377387 C7orf65Q6ZTY9 151 aa10.17□□□□□ -0.78
SF1-203ENST00000377387 DYNC1H1Q14204 4646 aaKnown RBP10.16□□□□□ -0.78
SF1-203ENST00000377387 SPINK1P00995 79 aa10.13□□□□□ -0.79
SF1-203ENST00000377387 Q8N1X5 172 aa10.1□□□□□ -0.79
SF1-203ENST00000377387 KMT2CQ8NEZ4 4911 aaKnown RBP10.06□□□□□ -0.8
SF1-203ENST00000377387 LINC00304Q8N9R0 145 aa10.06□□□□□ -0.8
SF1-203ENST00000377387 C9orf92A6NGG3 77 aa10.04□□□□□ -0.8
SF1-203ENST00000377387 RBM12B-AS1Q9P1G2 102 aa10.02□□□□□ -0.81
SF1-203ENST00000377387 APOBP04114 4563 aaKnown RBP9.97□□□□□ -0.81
SF1-203ENST00000377387 MIR22HGQ0VDD5 57 aa9.96□□□□□ -0.81
SF1-203ENST00000377387 UQCR11O14957 56 aa9.95□□□□□ -0.82
SF1-203ENST00000377387 PRAC1Q96KF2 57 aa9.94□□□□□ -0.82
SF1-203ENST00000377387 ADM2Q7Z4H4 148 aa9.93□□□□□ -0.82
SF1-203ENST00000377387 SPATA8Q6RVD6 105 aa9.92□□□□□ -0.82
SF1-203ENST00000377387 RYR2Q92736 4967 aa9.91□□□□□ -0.82
SF1-203ENST00000377387 LRP1Q07954 4544 aaKnown RBP9.85□□□□□ -0.83
SF1-203ENST00000377387 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
SF1-203ENST00000377387 FLG2Q5D862 2391 aaPredicted RBP9.78□□□□□ -0.84
SF1-203ENST00000377387 A0A1B0GVY2 172 aa9.76□□□□□ -0.85
SF1-203ENST00000377387 PKHD1L1Q86WI1 4243 aa9.76□□□□□ -0.85
SF1-203ENST00000377387 KRTAP21-3Q3LHN1 58 aa9.76□□□□□ -0.85
SF1-203ENST00000377387 A8MUU9 505 aa9.75□□□□□ -0.85
SF1-203ENST00000377387 KRTAP3-1Q9BYR8 98 aa9.75□□□□□ -0.85
SF1-203ENST00000377387 C20orf166-AS1Q96NR2 134 aa9.74□□□□□ -0.85
SF1-203ENST00000377387 DMBT1Q9UGM3 2413 aaPredicted RBP9.74□□□□□ -0.85
SF1-203ENST00000377387 MYCBP2O75592 4640 aa9.72□□□□□ -0.85
SF1-203ENST00000377387 KRTAP10-4P60372 401 aaPredicted RBP9.72□□□□□ -0.85
SF1-203ENST00000377387 RYR3Q15413 4870 aa9.71□□□□□ -0.86
SF1-203ENST00000377387 H0YAA0 97 aa9.64□□□□□ -0.87
SF1-203ENST00000377387 HSPG2P98160 4391 aa9.6□□□□□ -0.87
SF1-203ENST00000377387 A0A1B0GU33 70 aa9.59□□□□□ -0.87
SF1-203ENST00000377387 CSAG1Q6PB30 78 aa9.59□□□□□ -0.87
SF1-203ENST00000377387 KIAA1109Q2LD37 5005 aa9.57□□□□□ -0.88
SF1-203ENST00000377387 FAT3Q8TDW7 4589 aa9.56□□□□□ -0.88
SF1-203ENST00000377387 TNXBP22105 4242 aa9.54□□□□□ -0.88
SF1-203ENST00000377387 COX6B2Q6YFQ2 88 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms