RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 TP53AIP1Q9HCN2 124 aa7.66□□□□□ -1.18
USP11-204ENST00000377107 KMT2AQ03164 3969 aa7.66□□□□□ -1.18
USP11-204ENST00000377107 LINC00483Q53H64 154 aa7.65□□□□□ -1.18
USP11-204ENST00000377107 A6NED7 52 aa7.65□□□□□ -1.18
USP11-204ENST00000377107 SPANXA2-OT1Q8N9U9 137 aa7.63□□□□□ -1.19
USP11-204ENST00000377107 V9GYY9 64 aa7.63□□□□□ -1.19
USP11-204ENST00000377107 Q8N9P0 234 aaPredicted RBP7.62□□□□□ -1.19
USP11-204ENST00000377107 FRAS1Q86XX4 4008 aa7.62□□□□□ -1.19
USP11-204ENST00000377107 Q5W150 140 aa7.61□□□□□ -1.19
USP11-204ENST00000377107 IGLV7-46A0A075B6I9 117 aa7.6□□□□□ -1.19
USP11-204ENST00000377107 PRR26Q8N8Z3 221 aa7.59□□□□□ -1.19
USP11-204ENST00000377107 Q5VV11 94 aa7.58□□□□□ -1.2
USP11-204ENST00000377107 LIMD2Q9BT23 127 aa7.57□□□□□ -1.2
USP11-204ENST00000377107 LINC00313P59037 77 aa7.57□□□□□ -1.2
USP11-204ENST00000377107 PMAIP1Q13794 54 aa7.57□□□□□ -1.2
USP11-204ENST00000377107 C4orf48Q5BLP8 95 aa7.57□□□□□ -1.2
USP11-204ENST00000377107 KRTAP10-1P60331 282 aa7.56□□□□□ -1.2
USP11-204ENST00000377107 IGKV2D-30A0A075B6S6 120 aa7.55□□□□□ -1.2
USP11-204ENST00000377107 IGKV2-30P06310 120 aa7.55□□□□□ -1.2
USP11-204ENST00000377107 HRES1P13985 223 aa7.54□□□□□ -1.2
USP11-204ENST00000377107 DNHD1Q96M86 4753 aa7.53□□□□□ -1.2
USP11-204ENST00000377107 SSBP3-AS1Q7Z2R9 100 aa7.53□□□□□ -1.2
USP11-204ENST00000377107 PLA2G1BP04054 148 aaKnown RBP7.52□□□□□ -1.21
USP11-204ENST00000377107 SMR3BP02814 79 aaPredicted RBP7.52□□□□□ -1.21
USP11-204ENST00000377107 LOC101927531A0A1B0GV80 90 aa7.51□□□□□ -1.21
USP11-204ENST00000377107 VPS13DQ5THJ4 4388 aa7.5□□□□□ -1.21
USP11-204ENST00000377107 DNAH8Q96JB1 4490 aa7.5□□□□□ -1.21
USP11-204ENST00000377107 ASB16-AS1Q495Z4 193 aa7.49□□□□□ -1.21
USP11-204ENST00000377107 KRTAP13-2Q52LG2 175 aa7.49□□□□□ -1.21
USP11-204ENST00000377107 DNAH2Q9P225 4427 aa7.48□□□□□ -1.21
USP11-204ENST00000377107 TYMSOSQ8TAI1 123 aa7.47□□□□□ -1.21
USP11-204ENST00000377107 HECTD4Q9Y4D8 3996 aa7.47□□□□□ -1.21
USP11-204ENST00000377107 DNAH11Q96DT5 4516 aa7.47□□□□□ -1.21
USP11-204ENST00000377107 SPINK1P00995 79 aa7.46□□□□□ -1.21
USP11-204ENST00000377107 DNAH17Q9UFH2 4485 aa7.46□□□□□ -1.22
USP11-204ENST00000377107 DNAH6Q9C0G6 4158 aa7.45□□□□□ -1.22
USP11-204ENST00000377107 C8orf87E5RJ46 101 aa7.44□□□□□ -1.22
USP11-204ENST00000377107 ACYP2P14621 99 aa7.44□□□□□ -1.22
USP11-204ENST00000377107 SPINK7P58062 85 aa7.43□□□□□ -1.22
USP11-204ENST00000377107 FAM229AH3BQW9 127 aa7.43□□□□□ -1.22
USP11-204ENST00000377107 LCA10Q71F78 164 aa7.42□□□□□ -1.22
USP11-204ENST00000377107 DYNC2H1Q8NCM8 4307 aaKnown RBP7.42□□□□□ -1.22
USP11-204ENST00000377107 Q75L30 129 aa7.39□□□□□ -1.23
USP11-204ENST00000377107 C7orf65Q6ZTY9 151 aa7.38□□□□□ -1.23
USP11-204ENST00000377107 C9orf92A6NGG3 77 aa7.38□□□□□ -1.23
USP11-204ENST00000377107 LINC01558Q9Y6Z2 57 aa7.38□□□□□ -1.23
USP11-204ENST00000377107 Q8N1X5 172 aa7.36□□□□□ -1.23
USP11-204ENST00000377107 LRP1BQ9NZR2 4599 aa7.35□□□□□ -1.23
USP11-204ENST00000377107 A0A1B0GU69 56 aa7.34□□□□□ -1.23
USP11-204ENST00000377107 KRTAP1-4P0C5Y4 121 aa7.33□□□□□ -1.24
USP11-204ENST00000377107 KRTAP13-3Q3SY46 172 aa7.31□□□□□ -1.24
USP11-204ENST00000377107 LINC00304Q8N9R0 145 aa7.31□□□□□ -1.24
USP11-204ENST00000377107 CDC42SE1Q9NRR8 79 aa7.31□□□□□ -1.24
USP11-204ENST00000377107 Q6ZSA8 131 aa7.3□□□□□ -1.24
USP11-204ENST00000377107 ATP11AUNQ6ZP68 121 aa7.3□□□□□ -1.24
USP11-204ENST00000377107 DMBT1Q9UGM3 2413 aaPredicted RBP7.29□□□□□ -1.24
USP11-204ENST00000377107 DMAC1Q96GE9 116 aa7.27□□□□□ -1.25
USP11-204ENST00000377107 SEC61GP60059 68 aa7.27□□□□□ -1.25
USP11-204ENST00000377107 HYDINQ4G0P3 5121 aa7.27□□□□□ -1.25
USP11-204ENST00000377107 DNAH5Q8TE73 4624 aa7.26□□□□□ -1.25
USP11-204ENST00000377107 FLG2Q5D862 2391 aaPredicted RBP7.25□□□□□ -1.25
USP11-204ENST00000377107 KRTAP16-1A8MUX0 517 aa7.23□□□□□ -1.25
USP11-204ENST00000377107 ALMS1Q8TCU4 4167 aa7.23□□□□□ -1.25
USP11-204ENST00000377107 VPS13BQ7Z7G8 4022 aa7.2□□□□□ -1.26
USP11-204ENST00000377107 KTN1-AS1Q86SY8 53 aa7.19□□□□□ -1.26
USP11-204ENST00000377107 MIR22HGQ0VDD5 57 aa7.15□□□□□ -1.26
USP11-204ENST00000377107 PKHD1P08F94 4074 aa7.15□□□□□ -1.27
USP11-204ENST00000377107 PRAC1Q96KF2 57 aa7.15□□□□□ -1.27
USP11-204ENST00000377107 A6NN06 94 aa7.14□□□□□ -1.27
USP11-204ENST00000377107 UQCR11O14957 56 aa7.13□□□□□ -1.27
USP11-204ENST00000377107 FAT1Q14517 4588 aa7.13□□□□□ -1.27
USP11-204ENST00000377107 RBM12B-AS1Q9P1G2 102 aa7.1□□□□□ -1.27
USP11-204ENST00000377107 FAT2Q9NYQ8 4349 aa7.1□□□□□ -1.27
USP11-204ENST00000377107 ADM2Q7Z4H4 148 aa7.09□□□□□ -1.27
USP11-204ENST00000377107 PKD1P98161 4303 aa7.06□□□□□ -1.28
USP11-204ENST00000377107 SPATA8Q6RVD6 105 aa6.99□□□□□ -1.29
USP11-204ENST00000377107 DYNC1H1Q14204 4646 aaKnown RBP6.99□□□□□ -1.29
USP11-204ENST00000377107 A8MUU9 505 aa6.93□□□□□ -1.3
USP11-204ENST00000377107 SACSQ9NZJ4 4579 aa6.92□□□□□ -1.3
USP11-204ENST00000377107 C20orf166-AS1Q96NR2 134 aa6.92□□□□□ -1.3
USP11-204ENST00000377107 RPS29P62273 56 aaKnown RBP6.91□□□□□ -1.3
USP11-204ENST00000377107 A0A1B0GVY2 172 aa6.91□□□□□ -1.3
USP11-204ENST00000377107 A0A1B0GU33 70 aa6.9□□□□□ -1.3
USP11-204ENST00000377107 KRTAP3-1Q9BYR8 98 aa6.89□□□□□ -1.31
USP11-204ENST00000377107 Q5VSD8 79 aa6.88□□□□□ -1.31
USP11-204ENST00000377107 CSAG1Q6PB30 78 aa6.87□□□□□ -1.31
USP11-204ENST00000377107 CRIPTQ9P021 101 aa6.86□□□□□ -1.31
USP11-204ENST00000377107 MYCBP2O75592 4640 aa6.86□□□□□ -1.31
USP11-204ENST00000377107 KRTAP10-4P60372 401 aaPredicted RBP6.85□□□□□ -1.31
USP11-204ENST00000377107 LRP1Q07954 4544 aaKnown RBP6.85□□□□□ -1.31
USP11-204ENST00000377107 A0A0D9SG42 100 aa6.84□□□□□ -1.31
USP11-204ENST00000377107 H0YAA0 97 aa6.83□□□□□ -1.32
USP11-204ENST00000377107 COX6B2Q6YFQ2 88 aa6.83□□□□□ -1.32
USP11-204ENST00000377107 APOBP04114 4563 aaKnown RBP6.82□□□□□ -1.32
USP11-204ENST00000377107 KMT2CQ8NEZ4 4911 aaKnown RBP6.81□□□□□ -1.32
USP11-204ENST00000377107 H1FX-AS1Q4G0G2 97 aa6.8□□□□□ -1.32
USP11-204ENST00000377107 K7ERS5 55 aa6.77□□□□□ -1.33
USP11-204ENST00000377107 KRTAP21-3Q3LHN1 58 aa6.77□□□□□ -1.33
USP11-204ENST00000377107 LINC01554Q52M75 96 aa6.73□□□□□ -1.33
USP11-204ENST00000377107 KRTAP10-8P60410 259 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms