RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 CSMD3Q7Z407 3707 aa8.96□□□□□ -0.98
UBQLN1-202ENST00000376395 SSBP3-AS1Q7Z2R9 100 aa8.96□□□□□ -0.98
UBQLN1-202ENST00000376395 K7ERS5 55 aa8.95□□□□□ -0.98
UBQLN1-202ENST00000376395 A0A087X002 238 aa8.94□□□□□ -0.98
UBQLN1-202ENST00000376395 NOTCH2NLQ7Z3S9 236 aa8.94□□□□□ -0.98
UBQLN1-202ENST00000376395 KTN1-AS1Q86SY8 53 aa8.93□□□□□ -0.98
UBQLN1-202ENST00000376395 COL7A1Q02388 2944 aa8.92□□□□□ -0.98
UBQLN1-202ENST00000376395 CDC42SE1Q9NRR8 79 aa8.91□□□□□ -0.98
UBQLN1-202ENST00000376395 HRES1P13985 223 aa8.9□□□□□ -0.98
UBQLN1-202ENST00000376395 LCE6AA0A183 80 aa8.89□□□□□ -0.99
UBQLN1-202ENST00000376395 DMBT1Q9UGM3 2413 aaPredicted RBP8.88□□□□□ -0.99
UBQLN1-202ENST00000376395 UQCR11O14957 56 aa8.88□□□□□ -0.99
UBQLN1-202ENST00000376395 WWC2-AS2Q96NR7 200 aa8.88□□□□□ -0.99
UBQLN1-202ENST00000376395 Q75L30 129 aa8.87□□□□□ -0.99
UBQLN1-202ENST00000376395 Q8N1X5 172 aa8.86□□□□□ -0.99
UBQLN1-202ENST00000376395 SPINK7P58062 85 aa8.85□□□□□ -0.99
UBQLN1-202ENST00000376395 MIR22HGQ0VDD5 57 aa8.85□□□□□ -0.99
UBQLN1-202ENST00000376395 SMR3BP02814 79 aaPredicted RBP8.84□□□□□ -0.99
UBQLN1-202ENST00000376395 C9orf92A6NGG3 77 aa8.82□□□□□ -1
UBQLN1-202ENST00000376395 LINC01558Q9Y6Z2 57 aa8.82□□□□□ -1
UBQLN1-202ENST00000376395 PLAC8Q9NZF1 115 aa8.8□□□□□ -1
UBQLN1-202ENST00000376395 Q5W150 140 aa8.79□□□□□ -1
UBQLN1-202ENST00000376395 LCA10Q71F78 164 aa8.79□□□□□ -1
UBQLN1-202ENST00000376395 RBM12B-AS1Q9P1G2 102 aa8.76□□□□□ -1.01
UBQLN1-202ENST00000376395 LINC00304Q8N9R0 145 aa8.74□□□□□ -1.01
UBQLN1-202ENST00000376395 PRAC1Q96KF2 57 aa8.74□□□□□ -1.01
UBQLN1-202ENST00000376395 Q6ZRN7 208 aaPredicted RBP8.73□□□□□ -1.01
UBQLN1-202ENST00000376395 FBN3Q75N90 2809 aa8.73□□□□□ -1.01
UBQLN1-202ENST00000376395 Q6ZR54 194 aa8.71□□□□□ -1.01
UBQLN1-202ENST00000376395 LINC00483Q53H64 154 aa8.7□□□□□ -1.02
UBQLN1-202ENST00000376395 KRTAP13-1Q8IUC0 172 aa8.7□□□□□ -1.02
UBQLN1-202ENST00000376395 KRTAP10-2P60368 255 aa8.69□□□□□ -1.02
UBQLN1-202ENST00000376395 FLG2Q5D862 2391 aaPredicted RBP8.67□□□□□ -1.02
UBQLN1-202ENST00000376395 KRTAP10-1P60331 282 aa8.58□□□□□ -1.04
UBQLN1-202ENST00000376395 DMAC1Q96GE9 116 aa8.57□□□□□ -1.04
UBQLN1-202ENST00000376395 MEGF8Q7Z7M0 2845 aa8.51□□□□□ -1.05
UBQLN1-202ENST00000376395 A0A0D9SG42 100 aa8.5□□□□□ -1.05
UBQLN1-202ENST00000376395 ADM2Q7Z4H4 148 aa8.5□□□□□ -1.05
UBQLN1-202ENST00000376395 KRTAP13-2Q52LG2 175 aa8.48□□□□□ -1.05
UBQLN1-202ENST00000376395 A6NN06 94 aa8.48□□□□□ -1.05
UBQLN1-202ENST00000376395 A0A1B0GU33 70 aa8.47□□□□□ -1.05
UBQLN1-202ENST00000376395 CSAG1Q6PB30 78 aa8.45□□□□□ -1.06
UBQLN1-202ENST00000376395 LINC01554Q52M75 96 aa8.45□□□□□ -1.06
UBQLN1-202ENST00000376395 CRIPTQ9P021 101 aa8.42□□□□□ -1.06
UBQLN1-202ENST00000376395 ASB16-AS1Q495Z4 193 aa8.41□□□□□ -1.06
UBQLN1-202ENST00000376395 SPINT4Q6UDR6 99 aa8.39□□□□□ -1.07
UBQLN1-202ENST00000376395 DNAH10Q8IVF4 4471 aa8.33□□□□□ -1.08
UBQLN1-202ENST00000376395 SPATA8Q6RVD6 105 aa8.33□□□□□ -1.08
UBQLN1-202ENST00000376395 HUWE1Q7Z6Z7 4374 aaKnown RBP8.29□□□□□ -1.08
UBQLN1-202ENST00000376395 ANK2Q01484 3957 aa8.27□□□□□ -1.09
UBQLN1-202ENST00000376395 KRTAP1-4P0C5Y4 121 aa8.19□□□□□ -1.1
UBQLN1-202ENST00000376395 KRTAP13-3Q3SY46 172 aa8.18□□□□□ -1.1
UBQLN1-202ENST00000376395 H1FX-AS1Q4G0G2 97 aa8.18□□□□□ -1.1
UBQLN1-202ENST00000376395 H3BS24 57 aa8.14□□□□□ -1.11
UBQLN1-202ENST00000376395 KRTAP16-1A8MUX0 517 aa8.13□□□□□ -1.11
UBQLN1-202ENST00000376395 COX6B2Q6YFQ2 88 aa8.12□□□□□ -1.11
UBQLN1-202ENST00000376395 LYSTQ99698 3801 aa8.11□□□□□ -1.11
UBQLN1-202ENST00000376395 S4R3F8 94 aa8.09□□□□□ -1.12
UBQLN1-202ENST00000376395 Q6ZSA8 131 aa8.08□□□□□ -1.12
UBQLN1-202ENST00000376395 RPL37P61927 97 aaKnown RBP8.07□□□□□ -1.12
UBQLN1-202ENST00000376395 PLECQ15149 4684 aaKnown RBP8.05□□□□□ -1.12
UBQLN1-202ENST00000376395 Q5VSD8 79 aa8.01□□□□□ -1.13
UBQLN1-202ENST00000376395 ROMO1P60602 79 aa8□□□□□ -1.13
UBQLN1-202ENST00000376395 DNAH9Q9NYC9 4486 aa7.97□□□□□ -1.13
UBQLN1-202ENST00000376395 H0YAA0 97 aa7.97□□□□□ -1.13
UBQLN1-202ENST00000376395 RPS29P62273 56 aaKnown RBP7.97□□□□□ -1.13
UBQLN1-202ENST00000376395 KRTAP25-1Q3LHN0 102 aa7.96□□□□□ -1.13
UBQLN1-202ENST00000376395 A8MUU9 505 aa7.95□□□□□ -1.14
UBQLN1-202ENST00000376395 J3QL48 77 aa7.95□□□□□ -1.14
UBQLN1-202ENST00000376395 C20orf166-AS1Q96NR2 134 aa7.93□□□□□ -1.14
UBQLN1-202ENST00000376395 DNAH1Q9P2D7 4330 aa7.88□□□□□ -1.15
UBQLN1-202ENST00000376395 DNAH11Q96DT5 4516 aa7.85□□□□□ -1.15
UBQLN1-202ENST00000376395 STARD9Q9P2P6 4700 aa7.85□□□□□ -1.15
UBQLN1-202ENST00000376395 R4GN34 69 aa7.85□□□□□ -1.15
UBQLN1-202ENST00000376395 KMT2AQ03164 3969 aa7.82□□□□□ -1.16
UBQLN1-202ENST00000376395 DNAH7Q8WXX0 4024 aa7.82□□□□□ -1.16
UBQLN1-202ENST00000376395 FRAS1Q86XX4 4008 aa7.81□□□□□ -1.16
UBQLN1-202ENST00000376395 M0QZ58 72 aa7.8□□□□□ -1.16
UBQLN1-202ENST00000376395 CAMK2N1Q7Z7J9 78 aa7.79□□□□□ -1.16
UBQLN1-202ENST00000376395 KRTAP3-1Q9BYR8 98 aa7.77□□□□□ -1.17
UBQLN1-202ENST00000376395 KRTAP21-3Q3LHN1 58 aa7.75□□□□□ -1.17
UBQLN1-202ENST00000376395 C10orf95Q9H7T3 257 aa7.75□□□□□ -1.17
UBQLN1-202ENST00000376395 CMYA5Q8N3K9 4069 aa7.75□□□□□ -1.17
UBQLN1-202ENST00000376395 PRKDCP78527 4128 aaKnown RBP7.74□□□□□ -1.17
UBQLN1-202ENST00000376395 DNAH8Q96JB1 4490 aa7.74□□□□□ -1.17
UBQLN1-202ENST00000376395 P0C880 135 aa7.66□□□□□ -1.18
UBQLN1-202ENST00000376395 XP32Q5T750 250 aa7.66□□□□□ -1.18
UBQLN1-202ENST00000376395 LRP1BQ9NZR2 4599 aa7.66□□□□□ -1.18
UBQLN1-202ENST00000376395 DNHD1Q96M86 4753 aa7.65□□□□□ -1.18
UBQLN1-202ENST00000376395 VPS13DQ5THJ4 4388 aa7.64□□□□□ -1.19
UBQLN1-202ENST00000376395 DNAH17Q9UFH2 4485 aa7.64□□□□□ -1.19
UBQLN1-202ENST00000376395 DNAH3Q8TD57 4116 aa7.63□□□□□ -1.19
UBQLN1-202ENST00000376395 LUZP6Q538Z0 58 aa7.62□□□□□ -1.19
UBQLN1-202ENST00000376395 NDUFAF8A1L188 74 aa7.61□□□□□ -1.19
UBQLN1-202ENST00000376395 SEC61BP60468 96 aaKnown RBP7.6□□□□□ -1.19
UBQLN1-202ENST00000376395 DNAH6Q9C0G6 4158 aa7.57□□□□□ -1.2
UBQLN1-202ENST00000376395 DNAH2Q9P225 4427 aa7.56□□□□□ -1.2
UBQLN1-202ENST00000376395 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
UBQLN1-202ENST00000376395 DNAH5Q8TE73 4624 aa7.55□□□□□ -1.2
UBQLN1-202ENST00000376395 FAT1Q14517 4588 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms