RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 RBM12B-AS1Q9P1G2 102 aa10.16□□□□□ -0.78
VARS-215ENST00000375663 KRTAP7-1Q8IUC3 87 aa10.15□□□□□ -0.78
VARS-215ENST00000375663 SPINK7P58062 85 aa10.14□□□□□ -0.79
VARS-215ENST00000375663 LCE6AA0A183 80 aa10.12□□□□□ -0.79
VARS-215ENST00000375663 PANO1I0J062 215 aa10.11□□□□□ -0.79
VARS-215ENST00000375663 Q5W150 140 aa10.08□□□□□ -0.8
VARS-215ENST00000375663 KRTAP11-1Q8IUC1 163 aa10.06□□□□□ -0.8
VARS-215ENST00000375663 Q6ZR54 194 aa10.05□□□□□ -0.8
VARS-215ENST00000375663 LINC00483Q53H64 154 aa10.02□□□□□ -0.8
VARS-215ENST00000375663 PRAC1Q96KF2 57 aa10.01□□□□□ -0.81
VARS-215ENST00000375663 PKD1L1Q8TDX9 2849 aa10.01□□□□□ -0.81
VARS-215ENST00000375663 J3QL48 77 aa9.99□□□□□ -0.81
VARS-215ENST00000375663 A0A087X002 238 aa9.96□□□□□ -0.81
VARS-215ENST00000375663 SPINT4Q6UDR6 99 aa9.96□□□□□ -0.81
VARS-215ENST00000375663 NOTCH2NLQ7Z3S9 236 aa9.96□□□□□ -0.81
VARS-215ENST00000375663 DMAC1Q96GE9 116 aa9.93□□□□□ -0.82
VARS-215ENST00000375663 VWFP04275 2813 aa9.93□□□□□ -0.82
VARS-215ENST00000375663 A0A1B0GU33 70 aa9.91□□□□□ -0.82
VARS-215ENST00000375663 NBPF19A0A087WUL8 3843 aa9.91□□□□□ -0.82
VARS-215ENST00000375663 LINC01554Q52M75 96 aa9.9□□□□□ -0.82
VARS-215ENST00000375663 TENM1Q9UKZ4 2725 aa9.89□□□□□ -0.83
VARS-215ENST00000375663 A8MU10 97 aa9.87□□□□□ -0.83
VARS-215ENST00000375663 A0A0D9SG42 100 aa9.87□□□□□ -0.83
VARS-215ENST00000375663 COX6B2Q6YFQ2 88 aa9.84□□□□□ -0.83
VARS-215ENST00000375663 CRIPTQ9P021 101 aa9.83□□□□□ -0.84
VARS-215ENST00000375663 KRTAP13-1Q8IUC0 172 aa9.82□□□□□ -0.84
VARS-215ENST00000375663 Q6ZRN7 208 aaPredicted RBP9.82□□□□□ -0.84
VARS-215ENST00000375663 KRTAP10-2P60368 255 aa9.81□□□□□ -0.84
VARS-215ENST00000375663 PDZD2O15018 2839 aa9.8□□□□□ -0.84
VARS-215ENST00000375663 CSAG1Q6PB30 78 aa9.79□□□□□ -0.84
VARS-215ENST00000375663 KRTAP10-1P60331 282 aa9.77□□□□□ -0.85
VARS-215ENST00000375663 SRRM2Q9UQ35 2752 aaKnown RBP9.76□□□□□ -0.85
VARS-215ENST00000375663 A6NN06 94 aa9.75□□□□□ -0.85
VARS-215ENST00000375663 ZNF469Q96JG9 3925 aaPredicted RBP9.74□□□□□ -0.85
VARS-215ENST00000375663 OTOGQ6ZRI0 2925 aa9.74□□□□□ -0.85
VARS-215ENST00000375663 FBN1P35555 2871 aaKnown RBP9.72□□□□□ -0.85
VARS-215ENST00000375663 ASB16-AS1Q495Z4 193 aa9.68□□□□□ -0.86
VARS-215ENST00000375663 SPATA8Q6RVD6 105 aa9.68□□□□□ -0.86
VARS-215ENST00000375663 TENM2Q9NT68 2774 aa9.67□□□□□ -0.86
VARS-215ENST00000375663 KRTAP13-2Q52LG2 175 aa9.57□□□□□ -0.88
VARS-215ENST00000375663 TRRAPQ9Y4A5 3859 aa9.57□□□□□ -0.88
VARS-215ENST00000375663 ANK3Q12955 4377 aaKnown RBP9.56□□□□□ -0.88
VARS-215ENST00000375663 H1FX-AS1Q4G0G2 97 aa9.54□□□□□ -0.88
VARS-215ENST00000375663 ADM2Q7Z4H4 148 aa9.53□□□□□ -0.88
VARS-215ENST00000375663 AKAP9Q99996 3911 aa9.53□□□□□ -0.88
VARS-215ENST00000375663 H3BS24 57 aa9.52□□□□□ -0.89
VARS-215ENST00000375663 Q6ZSA8 131 aa9.52□□□□□ -0.89
VARS-215ENST00000375663 TGP01266 2768 aa9.52□□□□□ -0.89
VARS-215ENST00000375663 RPL37P61927 97 aaKnown RBP9.48□□□□□ -0.89
VARS-215ENST00000375663 S4R3F8 94 aa9.48□□□□□ -0.89
VARS-215ENST00000375663 ROMO1P60602 79 aa9.41□□□□□ -0.9
VARS-215ENST00000375663 Q5VSD8 79 aa9.37□□□□□ -0.91
VARS-215ENST00000375663 RPS29P62273 56 aaKnown RBP9.35□□□□□ -0.91
VARS-215ENST00000375663 M0R2T5 61 aa9.3□□□□□ -0.92
VARS-215ENST00000375663 KRTAP25-1Q3LHN0 102 aa9.28□□□□□ -0.92
VARS-215ENST00000375663 CAMK2N1Q7Z7J9 78 aa9.24□□□□□ -0.93
VARS-215ENST00000375663 R4GN34 69 aa9.24□□□□□ -0.93
VARS-215ENST00000375663 KRTAP1-4P0C5Y4 121 aa9.21□□□□□ -0.93
VARS-215ENST00000375663 LUZP6Q538Z0 58 aa9.21□□□□□ -0.94
VARS-215ENST00000375663 A8MUU9 505 aa9.17□□□□□ -0.94
VARS-215ENST00000375663 KRTAP16-1A8MUX0 517 aa9.14□□□□□ -0.95
VARS-215ENST00000375663 C20orf166-AS1Q96NR2 134 aa9.14□□□□□ -0.95
VARS-215ENST00000375663 KRTAP13-3Q3SY46 172 aa9.13□□□□□ -0.95
VARS-215ENST00000375663 M0QZ58 72 aa9.12□□□□□ -0.95
VARS-215ENST00000375663 FBN3Q75N90 2809 aa9.07□□□□□ -0.96
VARS-215ENST00000375663 SEC61BP60468 96 aaKnown RBP9.05□□□□□ -0.96
VARS-215ENST00000375663 H0YAA0 97 aa9.04□□□□□ -0.96
VARS-215ENST00000375663 CSMD3Q7Z407 3707 aa8.97□□□□□ -0.97
VARS-215ENST00000375663 COL7A1Q02388 2944 aa8.96□□□□□ -0.98
VARS-215ENST00000375663 NDUFAF8A1L188 74 aa8.85□□□□□ -0.99
VARS-215ENST00000375663 MEGF8Q7Z7M0 2845 aa8.84□□□□□ -0.99
VARS-215ENST00000375663 A0A0A0MQY5 61 aa8.81□□□□□ -1
VARS-215ENST00000375663 C10orf95Q9H7T3 257 aa8.79□□□□□ -1
VARS-215ENST00000375663 XP32Q5T750 250 aa8.77□□□□□ -1
VARS-215ENST00000375663 HUWE1Q7Z6Z7 4374 aaKnown RBP8.76□□□□□ -1.01
VARS-215ENST00000375663 ANK2Q01484 3957 aa8.69□□□□□ -1.02
VARS-215ENST00000375663 P0C880 135 aa8.67□□□□□ -1.02
VARS-215ENST00000375663 DNAH10Q8IVF4 4471 aa8.66□□□□□ -1.02
VARS-215ENST00000375663 KRTAP21-3Q3LHN1 58 aa8.63□□□□□ -1.03
VARS-215ENST00000375663 KRTAP3-1Q9BYR8 98 aa8.58□□□□□ -1.04
VARS-215ENST00000375663 PLAC4Q8WY50 150 aa8.54□□□□□ -1.04
VARS-215ENST00000375663 DNAH9Q9NYC9 4486 aa8.47□□□□□ -1.05
VARS-215ENST00000375663 PLECQ15149 4684 aaKnown RBP8.47□□□□□ -1.05
VARS-215ENST00000375663 KRTAP10-8P60410 259 aa8.46□□□□□ -1.05
VARS-215ENST00000375663 TPRXLQ17RH7 258 aa8.44□□□□□ -1.06
VARS-215ENST00000375663 LYSTQ99698 3801 aa8.44□□□□□ -1.06
VARS-215ENST00000375663 A0A1B0GVY2 172 aa8.43□□□□□ -1.06
VARS-215ENST00000375663 TNP1P09430 55 aa8.42□□□□□ -1.06
VARS-215ENST00000375663 CMYA5Q8N3K9 4069 aa8.39□□□□□ -1.07
VARS-215ENST00000375663 KRTAP12-2P59991 146 aa8.38□□□□□ -1.07
VARS-215ENST00000375663 PP632Q6XCG6 107 aa8.36□□□□□ -1.07
VARS-215ENST00000375663 DNAH1Q9P2D7 4330 aa8.32□□□□□ -1.08
VARS-215ENST00000375663 DNAH3Q8TD57 4116 aa8.31□□□□□ -1.08
VARS-215ENST00000375663 KRTAP10-6P60371 365 aaPredicted RBP8.31□□□□□ -1.08
VARS-215ENST00000375663 KRTAP13-4Q3LI77 160 aa8.3□□□□□ -1.08
VARS-215ENST00000375663 KRTAP12-1P59990 96 aa8.29□□□□□ -1.08
VARS-215ENST00000375663 STARD9Q9P2P6 4700 aa8.26□□□□□ -1.09
VARS-215ENST00000375663 DNAH7Q8WXX0 4024 aa8.22□□□□□ -1.09
VARS-215ENST00000375663 DNAH11Q96DT5 4516 aa8.17□□□□□ -1.1
VARS-215ENST00000375663 VPS13DQ5THJ4 4388 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms