RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 A0A1B0GU33 70 aa7.68□□□□□ -1.18
NPLOC4-202ENST00000374747 FAM229BQ4G0N7 80 aa7.68□□□□□ -1.18
NPLOC4-202ENST00000374747 Q8N9P0 234 aaPredicted RBP7.68□□□□□ -1.18
NPLOC4-202ENST00000374747 FP248Q71RG6 208 aaPredicted RBP7.66□□□□□ -1.18
NPLOC4-202ENST00000374747 Q8NDZ9 215 aa7.65□□□□□ -1.18
NPLOC4-202ENST00000374747 COL7A1Q02388 2944 aa7.65□□□□□ -1.18
NPLOC4-202ENST00000374747 CYSTM1Q9H1C7 97 aa7.64□□□□□ -1.19
NPLOC4-202ENST00000374747 MMP24-AS1A0A0U1RRL7 71 aa7.63□□□□□ -1.19
NPLOC4-202ENST00000374747 TNP2Q05952 138 aa7.62□□□□□ -1.19
NPLOC4-202ENST00000374747 Q5VV11 94 aa7.59□□□□□ -1.19
NPLOC4-202ENST00000374747 PRAC1Q96KF2 57 aa7.59□□□□□ -1.19
NPLOC4-202ENST00000374747 CSMD3Q7Z407 3707 aa7.56□□□□□ -1.2
NPLOC4-202ENST00000374747 SPRR1AP35321 89 aa7.56□□□□□ -1.2
NPLOC4-202ENST00000374747 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.55□□□□□ -1.2
NPLOC4-202ENST00000374747 CAMK2N1Q7Z7J9 78 aa7.55□□□□□ -1.2
NPLOC4-202ENST00000374747 H3BS24 57 aa7.55□□□□□ -1.2
NPLOC4-202ENST00000374747 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
NPLOC4-202ENST00000374747 LINC00483Q53H64 154 aa7.54□□□□□ -1.2
NPLOC4-202ENST00000374747 Q6ZSA8 131 aa7.53□□□□□ -1.2
NPLOC4-202ENST00000374747 KRTAP26-1Q6PEX3 210 aa7.53□□□□□ -1.2
NPLOC4-202ENST00000374747 ZCCHC13Q8WW36 166 aaKnown RBP7.53□□□□□ -1.2
NPLOC4-202ENST00000374747 SPINK7P58062 85 aa7.52□□□□□ -1.21
NPLOC4-202ENST00000374747 CSAG1Q6PB30 78 aa7.51□□□□□ -1.21
NPLOC4-202ENST00000374747 LINC00472Q9H8W2 130 aa7.51□□□□□ -1.21
NPLOC4-202ENST00000374747 KRTAP1-5Q9BYS1 174 aa7.5□□□□□ -1.21
NPLOC4-202ENST00000374747 Q5W150 140 aa7.5□□□□□ -1.21
NPLOC4-202ENST00000374747 PLAC8Q9NZF1 115 aa7.5□□□□□ -1.21
NPLOC4-202ENST00000374747 SPRR1BP22528 89 aa7.49□□□□□ -1.21
NPLOC4-202ENST00000374747 ANK2Q01484 3957 aa7.49□□□□□ -1.21
NPLOC4-202ENST00000374747 OXTP01178 125 aa7.47□□□□□ -1.21
NPLOC4-202ENST00000374747 A0A0A0MQY5 61 aa7.44□□□□□ -1.22
NPLOC4-202ENST00000374747 S4R3F8 94 aa7.44□□□□□ -1.22
NPLOC4-202ENST00000374747 TGP01266 2768 aa7.43□□□□□ -1.22
NPLOC4-202ENST00000374747 LCE6AA0A183 80 aa7.36□□□□□ -1.23
NPLOC4-202ENST00000374747 RPL37P61927 97 aaKnown RBP7.36□□□□□ -1.23
NPLOC4-202ENST00000374747 ROMO1P60602 79 aa7.35□□□□□ -1.23
NPLOC4-202ENST00000374747 Q6ZR54 194 aa7.35□□□□□ -1.23
NPLOC4-202ENST00000374747 R4GN34 69 aa7.33□□□□□ -1.24
NPLOC4-202ENST00000374747 ASB16-AS1Q495Z4 193 aa7.32□□□□□ -1.24
NPLOC4-202ENST00000374747 H1FX-AS1Q4G0G2 97 aa7.3□□□□□ -1.24
NPLOC4-202ENST00000374747 KRTAP21-3Q3LHN1 58 aa7.29□□□□□ -1.24
NPLOC4-202ENST00000374747 M0R2T5 61 aa7.29□□□□□ -1.24
NPLOC4-202ENST00000374747 KRTAP10-1P60331 282 aa7.29□□□□□ -1.24
NPLOC4-202ENST00000374747 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
NPLOC4-202ENST00000374747 KRTAP29-1A8MX34 341 aaPredicted RBP7.27□□□□□ -1.25
NPLOC4-202ENST00000374747 KRTAP4-16G5E9R7 235 aaPredicted RBP7.26□□□□□ -1.25
NPLOC4-202ENST00000374747 PANO1I0J062 215 aa7.23□□□□□ -1.25
NPLOC4-202ENST00000374747 Q6ZRN7 208 aaPredicted RBP7.22□□□□□ -1.25
NPLOC4-202ENST00000374747 LYSTQ99698 3801 aa7.22□□□□□ -1.25
NPLOC4-202ENST00000374747 FLG2Q5D862 2391 aaPredicted RBP7.2□□□□□ -1.26
NPLOC4-202ENST00000374747 DNAH10Q8IVF4 4471 aa7.2□□□□□ -1.26
NPLOC4-202ENST00000374747 M0QZ58 72 aa7.19□□□□□ -1.26
NPLOC4-202ENST00000374747 SPATA8Q6RVD6 105 aa7.19□□□□□ -1.26
NPLOC4-202ENST00000374747 KRTAP7-1Q8IUC3 87 aa7.18□□□□□ -1.26
NPLOC4-202ENST00000374747 SEC61BP60468 96 aaKnown RBP7.17□□□□□ -1.26
NPLOC4-202ENST00000374747 FBN3Q75N90 2809 aa7.16□□□□□ -1.26
NPLOC4-202ENST00000374747 Q5VSD8 79 aa7.15□□□□□ -1.26
NPLOC4-202ENST00000374747 A6NN06 94 aa7.13□□□□□ -1.27
NPLOC4-202ENST00000374747 MEGF8Q7Z7M0 2845 aa7.11□□□□□ -1.27
NPLOC4-202ENST00000374747 ADM2Q7Z4H4 148 aa7.11□□□□□ -1.27
NPLOC4-202ENST00000374747 KRTAP25-1Q3LHN0 102 aa7.08□□□□□ -1.28
NPLOC4-202ENST00000374747 KRTAP16-1A8MUX0 517 aa7.08□□□□□ -1.28
NPLOC4-202ENST00000374747 A0A087X002 238 aa7.07□□□□□ -1.28
NPLOC4-202ENST00000374747 NOTCH2NLQ7Z3S9 236 aa7.07□□□□□ -1.28
NPLOC4-202ENST00000374747 KRTAP11-1Q8IUC1 163 aa7.07□□□□□ -1.28
NPLOC4-202ENST00000374747 DMBT1Q9UGM3 2413 aaPredicted RBP7.07□□□□□ -1.28
NPLOC4-202ENST00000374747 DNAH9Q9NYC9 4486 aa7.02□□□□□ -1.29
NPLOC4-202ENST00000374747 KRTAP13-1Q8IUC0 172 aa7□□□□□ -1.29
NPLOC4-202ENST00000374747 HUWE1Q7Z6Z7 4374 aaKnown RBP7□□□□□ -1.29
NPLOC4-202ENST00000374747 PLAC4Q8WY50 150 aa6.99□□□□□ -1.29
NPLOC4-202ENST00000374747 A8MU10 97 aa6.99□□□□□ -1.29
NPLOC4-202ENST00000374747 DNAH7Q8WXX0 4024 aa6.98□□□□□ -1.29
NPLOC4-202ENST00000374747 CMYA5Q8N3K9 4069 aa6.97□□□□□ -1.29
NPLOC4-202ENST00000374747 RPS29P62273 56 aaKnown RBP6.95□□□□□ -1.3
NPLOC4-202ENST00000374747 PLECQ15149 4684 aaKnown RBP6.95□□□□□ -1.3
NPLOC4-202ENST00000374747 NDUFAF8A1L188 74 aa6.9□□□□□ -1.3
NPLOC4-202ENST00000374747 DNAH3Q8TD57 4116 aa6.89□□□□□ -1.31
NPLOC4-202ENST00000374747 KRTAP13-2Q52LG2 175 aa6.89□□□□□ -1.31
NPLOC4-202ENST00000374747 A8MUU9 505 aa6.88□□□□□ -1.31
NPLOC4-202ENST00000374747 C20orf166-AS1Q96NR2 134 aa6.85□□□□□ -1.31
NPLOC4-202ENST00000374747 DNAH1Q9P2D7 4330 aa6.84□□□□□ -1.31
NPLOC4-202ENST00000374747 STARD9Q9P2P6 4700 aa6.84□□□□□ -1.31
NPLOC4-202ENST00000374747 DNHD1Q96M86 4753 aa6.83□□□□□ -1.32
NPLOC4-202ENST00000374747 PRKDCP78527 4128 aaKnown RBP6.82□□□□□ -1.32
NPLOC4-202ENST00000374747 KMT2AQ03164 3969 aa6.79□□□□□ -1.32
NPLOC4-202ENST00000374747 FRAS1Q86XX4 4008 aa6.74□□□□□ -1.33
NPLOC4-202ENST00000374747 TNP1P09430 55 aa6.71□□□□□ -1.34
NPLOC4-202ENST00000374747 DNAH11Q96DT5 4516 aa6.69□□□□□ -1.34
NPLOC4-202ENST00000374747 KRTAP1-4P0C5Y4 121 aa6.68□□□□□ -1.34
NPLOC4-202ENST00000374747 DNAH8Q96JB1 4490 aa6.67□□□□□ -1.34
NPLOC4-202ENST00000374747 C10orf95Q9H7T3 257 aa6.67□□□□□ -1.34
NPLOC4-202ENST00000374747 DNAH17Q9UFH2 4485 aa6.63□□□□□ -1.35
NPLOC4-202ENST00000374747 DNAH2Q9P225 4427 aa6.63□□□□□ -1.35
NPLOC4-202ENST00000374747 DNAH6Q9C0G6 4158 aa6.63□□□□□ -1.35
NPLOC4-202ENST00000374747 HECTD4Q9Y4D8 3996 aa6.63□□□□□ -1.35
NPLOC4-202ENST00000374747 LRP1BQ9NZR2 4599 aa6.61□□□□□ -1.35
NPLOC4-202ENST00000374747 VPS13DQ5THJ4 4388 aa6.61□□□□□ -1.35
NPLOC4-202ENST00000374747 PP632Q6XCG6 107 aa6.6□□□□□ -1.35
NPLOC4-202ENST00000374747 H0YAA0 97 aa6.54□□□□□ -1.36
NPLOC4-202ENST00000374747 A0A1B0GVY2 172 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms