RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 HECTD4Q9Y4D8 3996 aa10.65□□□□□ -0.7
PHF1-201ENST00000374512 PRR15LQ9BU68 103 aa10.65□□□□□ -0.7
PHF1-201ENST00000374512 DNAH2Q9P225 4427 aa10.64□□□□□ -0.71
PHF1-201ENST00000374512 CHKB-CPT1BH3BT56 60 aa10.64□□□□□ -0.71
PHF1-201ENST00000374512 Q75L30 129 aa10.64□□□□□ -0.71
PHF1-201ENST00000374512 ANAPC11Q9NYG5 84 aa10.61□□□□□ -0.71
PHF1-201ENST00000374512 LY6G6CO95867 125 aa10.61□□□□□ -0.71
PHF1-201ENST00000374512 IGLV7-43P04211 117 aa10.6□□□□□ -0.71
PHF1-201ENST00000374512 A0A087X002 238 aa10.58□□□□□ -0.72
PHF1-201ENST00000374512 NOTCH2NLQ7Z3S9 236 aa10.58□□□□□ -0.72
PHF1-201ENST00000374512 LINC01558Q9Y6Z2 57 aa10.58□□□□□ -0.72
PHF1-201ENST00000374512 DNAH6Q9C0G6 4158 aa10.57□□□□□ -0.72
PHF1-201ENST00000374512 PMAIP1Q13794 54 aa10.57□□□□□ -0.72
PHF1-201ENST00000374512 SSBP3-AS1Q7Z2R9 100 aa10.57□□□□□ -0.72
PHF1-201ENST00000374512 DNAH8Q96JB1 4490 aa10.56□□□□□ -0.72
PHF1-201ENST00000374512 C8orf87E5RJ46 101 aa10.55□□□□□ -0.72
PHF1-201ENST00000374512 HRES1P13985 223 aa10.54□□□□□ -0.72
PHF1-201ENST00000374512 KRTAP13-3Q3SY46 172 aa10.53□□□□□ -0.72
PHF1-201ENST00000374512 TGP01266 2768 aa10.52□□□□□ -0.73
PHF1-201ENST00000374512 FRAS1Q86XX4 4008 aa10.51□□□□□ -0.73
PHF1-201ENST00000374512 SPINK6Q6UWN8 80 aa10.51□□□□□ -0.73
PHF1-201ENST00000374512 A6NED7 52 aa10.5□□□□□ -0.73
PHF1-201ENST00000374512 CIRBP-AS1Q8TBR5 109 aa10.5□□□□□ -0.73
PHF1-201ENST00000374512 FBN3Q75N90 2809 aa10.5□□□□□ -0.73
PHF1-201ENST00000374512 SPAG11AQ6PDA7 123 aa10.49□□□□□ -0.73
PHF1-201ENST00000374512 ATP11AUNQ6ZP68 121 aa10.49□□□□□ -0.73
PHF1-201ENST00000374512 Q5W150 140 aa10.48□□□□□ -0.73
PHF1-201ENST00000374512 A8MU10 97 aa10.46□□□□□ -0.73
PHF1-201ENST00000374512 LCA10Q71F78 164 aa10.46□□□□□ -0.74
PHF1-201ENST00000374512 CDC42SE1Q9NRR8 79 aa10.46□□□□□ -0.74
PHF1-201ENST00000374512 ALMS1Q8TCU4 4167 aa10.44□□□□□ -0.74
PHF1-201ENST00000374512 KRTAP10-2P60368 255 aa10.43□□□□□ -0.74
PHF1-201ENST00000374512 ACYP2P14621 99 aa10.42□□□□□ -0.74
PHF1-201ENST00000374512 FAM229AH3BQW9 127 aa10.41□□□□□ -0.74
PHF1-201ENST00000374512 LINC00313P59037 77 aa10.41□□□□□ -0.74
PHF1-201ENST00000374512 DNAH5Q8TE73 4624 aa10.4□□□□□ -0.74
PHF1-201ENST00000374512 DNAH11Q96DT5 4516 aa10.39□□□□□ -0.75
PHF1-201ENST00000374512 SPTSSBQ8NFR3 76 aa10.37□□□□□ -0.75
PHF1-201ENST00000374512 DMAC1Q96GE9 116 aa10.35□□□□□ -0.75
PHF1-201ENST00000374512 SEC61GP60059 68 aa10.34□□□□□ -0.75
PHF1-201ENST00000374512 Q6ZSA8 131 aa10.34□□□□□ -0.75
PHF1-201ENST00000374512 PRR26Q8N8Z3 221 aa10.32□□□□□ -0.76
PHF1-201ENST00000374512 KTN1-AS1Q86SY8 53 aa10.31□□□□□ -0.76
PHF1-201ENST00000374512 HYDINQ4G0P3 5121 aa10.31□□□□□ -0.76
PHF1-201ENST00000374512 KRTAP13-2Q52LG2 175 aa10.3□□□□□ -0.76
PHF1-201ENST00000374512 IGKV2-30P06310 120 aa10.3□□□□□ -0.76
PHF1-201ENST00000374512 KRTAP10-1P60331 282 aa10.3□□□□□ -0.76
PHF1-201ENST00000374512 A6NN06 94 aa10.29□□□□□ -0.76
PHF1-201ENST00000374512 SPINK7P58062 85 aa10.29□□□□□ -0.76
PHF1-201ENST00000374512 PKD1P98161 4303 aa10.27□□□□□ -0.77
PHF1-201ENST00000374512 FAT2Q9NYQ8 4349 aa10.26□□□□□ -0.77
PHF1-201ENST00000374512 KRTAP16-1A8MUX0 517 aa10.25□□□□□ -0.77
PHF1-201ENST00000374512 KRTAP1-4P0C5Y4 121 aa10.18□□□□□ -0.78
PHF1-201ENST00000374512 LRP1BQ9NZR2 4599 aa10.17□□□□□ -0.78
PHF1-201ENST00000374512 RETNLBQ9BQ08 111 aa10.16□□□□□ -0.78
PHF1-201ENST00000374512 C4orf48Q5BLP8 95 aa10.14□□□□□ -0.79
PHF1-201ENST00000374512 A0A1B0GU69 56 aa10.14□□□□□ -0.79
PHF1-201ENST00000374512 C7orf65Q6ZTY9 151 aa10.13□□□□□ -0.79
PHF1-201ENST00000374512 SPINK1P00995 79 aa10.13□□□□□ -0.79
PHF1-201ENST00000374512 SACSQ9NZJ4 4579 aa10.09□□□□□ -0.79
PHF1-201ENST00000374512 PLA2G1BP04054 148 aaKnown RBP10.09□□□□□ -0.79
PHF1-201ENST00000374512 IGKV2D-30A0A075B6S6 120 aa10.07□□□□□ -0.8
PHF1-201ENST00000374512 TYMSOSQ8TAI1 123 aa10.07□□□□□ -0.8
PHF1-201ENST00000374512 VPS13BQ7Z7G8 4022 aa10.06□□□□□ -0.8
PHF1-201ENST00000374512 SPATA8Q6RVD6 105 aa10.05□□□□□ -0.8
PHF1-201ENST00000374512 RPS29P62273 56 aaKnown RBP10.05□□□□□ -0.8
PHF1-201ENST00000374512 RBM12B-AS1Q9P1G2 102 aa10.03□□□□□ -0.8
PHF1-201ENST00000374512 UQCR11O14957 56 aa10.01□□□□□ -0.81
PHF1-201ENST00000374512 PKHD1P08F94 4074 aa9.97□□□□□ -0.81
PHF1-201ENST00000374512 MIR22HGQ0VDD5 57 aa9.95□□□□□ -0.82
PHF1-201ENST00000374512 LINC00304Q8N9R0 145 aa9.94□□□□□ -0.82
PHF1-201ENST00000374512 A0A1B0GVY2 172 aa9.92□□□□□ -0.82
PHF1-201ENST00000374512 DYNC1H1Q14204 4646 aaKnown RBP9.92□□□□□ -0.82
PHF1-201ENST00000374512 SMR3BP02814 79 aaPredicted RBP9.86□□□□□ -0.83
PHF1-201ENST00000374512 RYR2Q92736 4967 aa9.81□□□□□ -0.84
PHF1-201ENST00000374512 Q8N1X5 172 aa9.81□□□□□ -0.84
PHF1-201ENST00000374512 C20orf166-AS1Q96NR2 134 aa9.8□□□□□ -0.84
PHF1-201ENST00000374512 APOBP04114 4563 aaKnown RBP9.8□□□□□ -0.84
PHF1-201ENST00000374512 A8MUU9 505 aa9.8□□□□□ -0.84
PHF1-201ENST00000374512 KMT2CQ8NEZ4 4911 aaKnown RBP9.79□□□□□ -0.84
PHF1-201ENST00000374512 KRTAP10-4P60372 401 aaPredicted RBP9.77□□□□□ -0.85
PHF1-201ENST00000374512 FAT1Q14517 4588 aa9.72□□□□□ -0.85
PHF1-201ENST00000374512 PRAC1Q96KF2 57 aa9.7□□□□□ -0.86
PHF1-201ENST00000374512 PKHD1L1Q86WI1 4243 aa9.68□□□□□ -0.86
PHF1-201ENST00000374512 C9orf92A6NGG3 77 aa9.67□□□□□ -0.86
PHF1-201ENST00000374512 ADM2Q7Z4H4 148 aa9.66□□□□□ -0.86
PHF1-201ENST00000374512 KRTAP3-1Q9BYR8 98 aa9.63□□□□□ -0.87
PHF1-201ENST00000374512 RYR3Q15413 4870 aa9.58□□□□□ -0.88
PHF1-201ENST00000374512 A0A1B0GU33 70 aa9.56□□□□□ -0.88
PHF1-201ENST00000374512 H0YAA0 97 aa9.56□□□□□ -0.88
PHF1-201ENST00000374512 LINC01554Q52M75 96 aa9.55□□□□□ -0.88
PHF1-201ENST00000374512 COX6B2Q6YFQ2 88 aa9.53□□□□□ -0.88
PHF1-201ENST00000374512 H1FX-AS1Q4G0G2 97 aa9.52□□□□□ -0.88
PHF1-201ENST00000374512 CSAG1Q6PB30 78 aa9.47□□□□□ -0.89
PHF1-201ENST00000374512 FLG2Q5D862 2391 aaPredicted RBP9.47□□□□□ -0.89
PHF1-201ENST00000374512 Q5VSD8 79 aa9.44□□□□□ -0.9
PHF1-201ENST00000374512 HSPG2P98160 4391 aa9.43□□□□□ -0.9
PHF1-201ENST00000374512 KRTAP10-8P60410 259 aa9.41□□□□□ -0.9
PHF1-201ENST00000374512 TNXBP22105 4242 aa9.38□□□□□ -0.91
PHF1-201ENST00000374512 RYR1P21817 5038 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms