RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 Q8N9P0 234 aaPredicted RBP10.55□□□□□ -0.72
TRAF3IP1-201ENST00000373327 CD164Q04900 197 aa10.55□□□□□ -0.72
TRAF3IP1-201ENST00000373327 KRTAP29-1A8MX34 341 aaPredicted RBP10.53□□□□□ -0.72
TRAF3IP1-201ENST00000373327 KRTAP10-1P60331 282 aa10.53□□□□□ -0.72
TRAF3IP1-201ENST00000373327 FAM229AH3BQW9 127 aa10.51□□□□□ -0.73
TRAF3IP1-201ENST00000373327 K7ERS5 55 aa10.51□□□□□ -0.73
TRAF3IP1-201ENST00000373327 Q6ZR54 194 aa10.5□□□□□ -0.73
TRAF3IP1-201ENST00000373327 A0A1B0GU69 56 aa10.49□□□□□ -0.73
TRAF3IP1-201ENST00000373327 MEGF8Q7Z7M0 2845 aa10.48□□□□□ -0.73
TRAF3IP1-201ENST00000373327 CYP4F30PQ9H0H9 118 aa10.47□□□□□ -0.73
TRAF3IP1-201ENST00000373327 C8orf87E5RJ46 101 aa10.47□□□□□ -0.73
TRAF3IP1-201ENST00000373327 SPANXA2-OT1Q8N9U9 137 aa10.47□□□□□ -0.73
TRAF3IP1-201ENST00000373327 Q8N1X5 172 aa10.46□□□□□ -0.73
TRAF3IP1-201ENST00000373327 ZCCHC13Q8WW36 166 aaKnown RBP10.46□□□□□ -0.74
TRAF3IP1-201ENST00000373327 LINC00304Q8N9R0 145 aa10.45□□□□□ -0.74
TRAF3IP1-201ENST00000373327 IGLV7-46A0A075B6I9 117 aa10.43□□□□□ -0.74
TRAF3IP1-201ENST00000373327 KRTAP13-1Q8IUC0 172 aa10.42□□□□□ -0.74
TRAF3IP1-201ENST00000373327 Q1T7F1 81 aa10.41□□□□□ -0.74
TRAF3IP1-201ENST00000373327 HRES1P13985 223 aa10.4□□□□□ -0.74
TRAF3IP1-201ENST00000373327 Q5W150 140 aa10.39□□□□□ -0.75
TRAF3IP1-201ENST00000373327 LINC00483Q53H64 154 aa10.38□□□□□ -0.75
TRAF3IP1-201ENST00000373327 A8MU10 97 aa10.33□□□□□ -0.76
TRAF3IP1-201ENST00000373327 Q5VV11 94 aa10.32□□□□□ -0.76
TRAF3IP1-201ENST00000373327 ATP11AUNQ6ZP68 121 aa10.32□□□□□ -0.76
TRAF3IP1-201ENST00000373327 LCE6AA0A183 80 aa10.29□□□□□ -0.76
TRAF3IP1-201ENST00000373327 KRTAP13-2Q52LG2 175 aa10.24□□□□□ -0.77
TRAF3IP1-201ENST00000373327 SPINK7P58062 85 aa10.23□□□□□ -0.77
TRAF3IP1-201ENST00000373327 HUWE1Q7Z6Z7 4374 aaKnown RBP10.22□□□□□ -0.77
TRAF3IP1-201ENST00000373327 ANK2Q01484 3957 aa10.14□□□□□ -0.79
TRAF3IP1-201ENST00000373327 DNAH10Q8IVF4 4471 aa10.14□□□□□ -0.79
TRAF3IP1-201ENST00000373327 UQCR11O14957 56 aa10.13□□□□□ -0.79
TRAF3IP1-201ENST00000373327 MIR22HGQ0VDD5 57 aa10.13□□□□□ -0.79
TRAF3IP1-201ENST00000373327 Q75L30 129 aa10.11□□□□□ -0.79
TRAF3IP1-201ENST00000373327 CDC42SE1Q9NRR8 79 aa10.11□□□□□ -0.79
TRAF3IP1-201ENST00000373327 LINC01558Q9Y6Z2 57 aa10.11□□□□□ -0.79
TRAF3IP1-201ENST00000373327 LCA10Q71F78 164 aa10.06□□□□□ -0.8
TRAF3IP1-201ENST00000373327 PRAC1Q96KF2 57 aa9.99□□□□□ -0.81
TRAF3IP1-201ENST00000373327 KTN1-AS1Q86SY8 53 aa9.99□□□□□ -0.81
TRAF3IP1-201ENST00000373327 DMAC1Q96GE9 116 aa9.98□□□□□ -0.81
TRAF3IP1-201ENST00000373327 PLECQ15149 4684 aaKnown RBP9.93□□□□□ -0.82
TRAF3IP1-201ENST00000373327 A0A0D9SG42 100 aa9.93□□□□□ -0.82
TRAF3IP1-201ENST00000373327 KRTAP1-4P0C5Y4 121 aa9.92□□□□□ -0.82
TRAF3IP1-201ENST00000373327 LYSTQ99698 3801 aa9.91□□□□□ -0.82
TRAF3IP1-201ENST00000373327 DNAH9Q9NYC9 4486 aa9.9□□□□□ -0.82
TRAF3IP1-201ENST00000373327 SPINT4Q6UDR6 99 aa9.9□□□□□ -0.83
TRAF3IP1-201ENST00000373327 ASB16-AS1Q495Z4 193 aa9.87□□□□□ -0.83
TRAF3IP1-201ENST00000373327 Q6ZSA8 131 aa9.87□□□□□ -0.83
TRAF3IP1-201ENST00000373327 Q5VSD8 79 aa9.84□□□□□ -0.83
TRAF3IP1-201ENST00000373327 RBM12B-AS1Q9P1G2 102 aa9.81□□□□□ -0.84
TRAF3IP1-201ENST00000373327 A0A1B0GU33 70 aa9.79□□□□□ -0.84
TRAF3IP1-201ENST00000373327 CRIPTQ9P021 101 aa9.79□□□□□ -0.84
TRAF3IP1-201ENST00000373327 DNHD1Q96M86 4753 aa9.75□□□□□ -0.85
TRAF3IP1-201ENST00000373327 SPATA8Q6RVD6 105 aa9.73□□□□□ -0.85
TRAF3IP1-201ENST00000373327 ADM2Q7Z4H4 148 aa9.72□□□□□ -0.85
TRAF3IP1-201ENST00000373327 STARD9Q9P2P6 4700 aa9.72□□□□□ -0.85
TRAF3IP1-201ENST00000373327 PRKDCP78527 4128 aaKnown RBP9.71□□□□□ -0.86
TRAF3IP1-201ENST00000373327 LINC01554Q52M75 96 aa9.7□□□□□ -0.86
TRAF3IP1-201ENST00000373327 DNAH1Q9P2D7 4330 aa9.68□□□□□ -0.86
TRAF3IP1-201ENST00000373327 J3QL48 77 aa9.68□□□□□ -0.86
TRAF3IP1-201ENST00000373327 DNAH11Q96DT5 4516 aa9.68□□□□□ -0.86
TRAF3IP1-201ENST00000373327 KRTAP16-1A8MUX0 517 aa9.67□□□□□ -0.86
TRAF3IP1-201ENST00000373327 A6NN06 94 aa9.62□□□□□ -0.87
TRAF3IP1-201ENST00000373327 CSAG1Q6PB30 78 aa9.62□□□□□ -0.87
TRAF3IP1-201ENST00000373327 KMT2AQ03164 3969 aa9.62□□□□□ -0.87
TRAF3IP1-201ENST00000373327 KRTAP13-3Q3SY46 172 aa9.62□□□□□ -0.87
TRAF3IP1-201ENST00000373327 CMYA5Q8N3K9 4069 aa9.61□□□□□ -0.87
TRAF3IP1-201ENST00000373327 DNAH7Q8WXX0 4024 aa9.58□□□□□ -0.88
TRAF3IP1-201ENST00000373327 COX6B2Q6YFQ2 88 aa9.56□□□□□ -0.88
TRAF3IP1-201ENST00000373327 S4R3F8 94 aa9.52□□□□□ -0.89
TRAF3IP1-201ENST00000373327 H1FX-AS1Q4G0G2 97 aa9.49□□□□□ -0.89
TRAF3IP1-201ENST00000373327 A8MUU9 505 aa9.48□□□□□ -0.89
TRAF3IP1-201ENST00000373327 H3BS24 57 aa9.47□□□□□ -0.89
TRAF3IP1-201ENST00000373327 RPS29P62273 56 aaKnown RBP9.47□□□□□ -0.89
TRAF3IP1-201ENST00000373327 C20orf166-AS1Q96NR2 134 aa9.45□□□□□ -0.9
TRAF3IP1-201ENST00000373327 VPS13DQ5THJ4 4388 aa9.43□□□□□ -0.9
TRAF3IP1-201ENST00000373327 DNAH3Q8TD57 4116 aa9.43□□□□□ -0.9
TRAF3IP1-201ENST00000373327 DNAH8Q96JB1 4490 aa9.41□□□□□ -0.9
TRAF3IP1-201ENST00000373327 FRAS1Q86XX4 4008 aa9.41□□□□□ -0.9
TRAF3IP1-201ENST00000373327 LRP1BQ9NZR2 4599 aa9.37□□□□□ -0.91
TRAF3IP1-201ENST00000373327 KRTAP21-3Q3LHN1 58 aa9.35□□□□□ -0.91
TRAF3IP1-201ENST00000373327 DNAH5Q8TE73 4624 aa9.35□□□□□ -0.91
TRAF3IP1-201ENST00000373327 FAT1Q14517 4588 aa9.35□□□□□ -0.91
TRAF3IP1-201ENST00000373327 A0A1B0GVY2 172 aa9.33□□□□□ -0.92
TRAF3IP1-201ENST00000373327 RPL37P61927 97 aaKnown RBP9.31□□□□□ -0.92
TRAF3IP1-201ENST00000373327 DNAH17Q9UFH2 4485 aa9.3□□□□□ -0.92
TRAF3IP1-201ENST00000373327 DNAH6Q9C0G6 4158 aa9.28□□□□□ -0.92
TRAF3IP1-201ENST00000373327 H0YAA0 97 aa9.28□□□□□ -0.92
TRAF3IP1-201ENST00000373327 XP32Q5T750 250 aa9.28□□□□□ -0.92
TRAF3IP1-201ENST00000373327 DNAH2Q9P225 4427 aa9.27□□□□□ -0.92
TRAF3IP1-201ENST00000373327 KRTAP3-1Q9BYR8 98 aa9.2□□□□□ -0.94
TRAF3IP1-201ENST00000373327 R4GN34 69 aa9.19□□□□□ -0.94
TRAF3IP1-201ENST00000373327 M0QZ58 72 aa9.17□□□□□ -0.94
TRAF3IP1-201ENST00000373327 HECTD4Q9Y4D8 3996 aa9.15□□□□□ -0.94
TRAF3IP1-201ENST00000373327 ROMO1P60602 79 aa9.14□□□□□ -0.95
TRAF3IP1-201ENST00000373327 KRTAP10-8P60410 259 aa9.1□□□□□ -0.95
TRAF3IP1-201ENST00000373327 VPS13BQ7Z7G8 4022 aa9.1□□□□□ -0.95
TRAF3IP1-201ENST00000373327 P0C880 135 aa9.09□□□□□ -0.95
TRAF3IP1-201ENST00000373327 CAMK2N1Q7Z7J9 78 aa9.09□□□□□ -0.95
TRAF3IP1-201ENST00000373327 DYNC1H1Q14204 4646 aaKnown RBP9.09□□□□□ -0.95
TRAF3IP1-201ENST00000373327 SEC61BP60468 96 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms