RNA–Protein interactions for RNA: ENST00000373063.7

FOXP4-204, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 5,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-204ENST00000373063 ATMQ13315 3056 aa11.96□□□□□ -0.49
FOXP4-204ENST00000373063 KRTAP10-10P60014 251 aa11.95□□□□□ -0.5
FOXP4-204ENST00000373063 TENM4Q6N022 2769 aa11.94□□□□□ -0.5
FOXP4-204ENST00000373063 REV3LO60673 3130 aa11.93□□□□□ -0.5
FOXP4-204ENST00000373063 SZT2Q5T011 3432 aa11.92□□□□□ -0.5
FOXP4-204ENST00000373063 COL12A1Q99715 3063 aa11.92□□□□□ -0.5
FOXP4-204ENST00000373063 FLNCQ14315 2725 aa11.89□□□□□ -0.51
FOXP4-204ENST00000373063 KALRNO60229 2985 aa11.86□□□□□ -0.51
FOXP4-204ENST00000373063 C10orf95Q9H7T3 257 aa11.85□□□□□ -0.51
FOXP4-204ENST00000373063 LRBAP50851 2863 aa11.84□□□□□ -0.51
FOXP4-204ENST00000373063 A6NN06 94 aa11.84□□□□□ -0.51
FOXP4-204ENST00000373063 APCP25054 2843 aa11.83□□□□□ -0.52
FOXP4-204ENST00000373063 COL6A3P12111 3177 aa11.83□□□□□ -0.52
FOXP4-204ENST00000373063 FRYLO94915 3013 aa11.82□□□□□ -0.52
FOXP4-204ENST00000373063 EYSQ5T1H1 3165 aa11.8□□□□□ -0.52
FOXP4-204ENST00000373063 NBEAQ8NFP9 2946 aa11.77□□□□□ -0.52
FOXP4-204ENST00000373063 VCANP13611 3396 aa11.77□□□□□ -0.53
FOXP4-204ENST00000373063 KRTAP13-3Q3SY46 172 aa11.76□□□□□ -0.53
FOXP4-204ENST00000373063 LAMA1P25391 3075 aa11.74□□□□□ -0.53
FOXP4-204ENST00000373063 PRO2289Q9P1D8 64 aa11.72□□□□□ -0.53
FOXP4-204ENST00000373063 DNAH14Q0VDD8 3507 aa11.72□□□□□ -0.53
FOXP4-204ENST00000373063 DMXL2Q8TDJ6 3036 aa11.71□□□□□ -0.53
FOXP4-204ENST00000373063 BOD1L1Q8NFC6 3051 aa11.65□□□□□ -0.54
FOXP4-204ENST00000373063 PP632Q6XCG6 107 aa11.63□□□□□ -0.55
FOXP4-204ENST00000373063 TNRC18O15417 2968 aaPredicted RBP11.63□□□□□ -0.55
FOXP4-204ENST00000373063 KRTAP16-1A8MUX0 517 aa11.61□□□□□ -0.55
FOXP4-204ENST00000373063 ADGRG4Q8IZF6 3080 aa11.6□□□□□ -0.55
FOXP4-204ENST00000373063 ASH1LQ9NR48 2969 aaKnown RBP11.56□□□□□ -0.56
FOXP4-204ENST00000373063 NIPBLQ6KC79 2804 aaeCLIP11.54□□□□□ -0.56
FOXP4-204ENST00000373063 NDUFAF8A1L188 74 aa11.54□□□□□ -0.56
FOXP4-204ENST00000373063 CFAP47Q6ZTR5 3102 aa11.54□□□□□ -0.56
FOXP4-204ENST00000373063 USP34Q70CQ2 3546 aa11.48□□□□□ -0.57
FOXP4-204ENST00000373063 ZZEF1O43149 2961 aa11.47□□□□□ -0.57
FOXP4-204ENST00000373063 CELSR2Q9HCU4 2923 aa11.47□□□□□ -0.57
FOXP4-204ENST00000373063 SPTBN5Q9NRC6 3674 aaKnown RBP11.46□□□□□ -0.57
FOXP4-204ENST00000373063 H0YAA0 97 aa11.41□□□□□ -0.58
FOXP4-204ENST00000373063 DCHS2Q6V1P9 2916 aa11.39□□□□□ -0.59
FOXP4-204ENST00000373063 TENM2Q9NT68 2774 aa11.37□□□□□ -0.59
FOXP4-204ENST00000373063 P0C880 135 aa11.37□□□□□ -0.59
FOXP4-204ENST00000373063 SPEGQ15772 3267 aa11.31□□□□□ -0.6
FOXP4-204ENST00000373063 DMXL1Q9Y485 3027 aa11.27□□□□□ -0.61
FOXP4-204ENST00000373063 TENM1Q9UKZ4 2725 aa11.25□□□□□ -0.61
FOXP4-204ENST00000373063 HRNRQ86YZ3 2850 aaPredicted RBP11.2□□□□□ -0.62
FOXP4-204ENST00000373063 ZANQ9Y493 2812 aa11.18□□□□□ -0.62
FOXP4-204ENST00000373063 NF1P21359 2839 aa11.18□□□□□ -0.62
FOXP4-204ENST00000373063 TENM3Q9P273 2699 aa11.07□□□□□ -0.64
FOXP4-204ENST00000373063 CELSR1Q9NYQ6 3014 aa10.97□□□□□ -0.65
FOXP4-204ENST00000373063 FBN2P35556 2912 aa10.95□□□□□ -0.66
FOXP4-204ENST00000373063 KRTAP12-2P59991 146 aa10.89□□□□□ -0.67
FOXP4-204ENST00000373063 LOC400499M0QZD8 3231 aa10.88□□□□□ -0.67
FOXP4-204ENST00000373063 MXRA5Q9NR99 2828 aa10.83□□□□□ -0.68
FOXP4-204ENST00000373063 NBPF19A0A087WUL8 3843 aa10.77□□□□□ -0.69
FOXP4-204ENST00000373063 TGP01266 2768 aa10.76□□□□□ -0.69
FOXP4-204ENST00000373063 KRTAP13-4Q3LI77 160 aa10.76□□□□□ -0.69
FOXP4-204ENST00000373063 PKD1L1Q8TDX9 2849 aa10.74□□□□□ -0.69
FOXP4-204ENST00000373063 MYO15AQ9UKN7 3530 aa10.71□□□□□ -0.69
FOXP4-204ENST00000373063 PDZD2O15018 2839 aa10.67□□□□□ -0.7
FOXP4-204ENST00000373063 KRTAP12-1P59990 96 aa10.64□□□□□ -0.71
FOXP4-204ENST00000373063 WDFY3Q8IZQ1 3526 aa10.64□□□□□ -0.71
FOXP4-204ENST00000373063 KRTAP3-1Q9BYR8 98 aa10.6□□□□□ -0.71
FOXP4-204ENST00000373063 RELNP78509 3460 aa10.59□□□□□ -0.71
FOXP4-204ENST00000373063 VWFP04275 2813 aa10.59□□□□□ -0.71
FOXP4-204ENST00000373063 ASPMQ8IZT6 3477 aa10.55□□□□□ -0.72
FOXP4-204ENST00000373063 MT1HL1P0DM35 61 aa10.53□□□□□ -0.72
FOXP4-204ENST00000373063 KRTAP15-1Q3LI76 137 aa10.52□□□□□ -0.72
FOXP4-204ENST00000373063 ANK3Q12955 4377 aaKnown RBP10.51□□□□□ -0.73
FOXP4-204ENST00000373063 DCHS1Q96JQ0 3298 aa10.46□□□□□ -0.73
FOXP4-204ENST00000373063 KRTAP4-5Q9BYR2 181 aa10.41□□□□□ -0.74
FOXP4-204ENST00000373063 OTOGQ6ZRI0 2925 aa10.34□□□□□ -0.75
FOXP4-204ENST00000373063 ZFHX3Q15911 3703 aa10.24□□□□□ -0.77
FOXP4-204ENST00000373063 KRTAP10-6P60371 365 aaPredicted RBP10.23□□□□□ -0.77
FOXP4-204ENST00000373063 ZFHX4Q86UP3 3567 aa10.23□□□□□ -0.77
FOXP4-204ENST00000373063 FBN1P35555 2871 aaKnown RBP10.22□□□□□ -0.77
FOXP4-204ENST00000373063 LAMA5O15230 3695 aa10.18□□□□□ -0.78
FOXP4-204ENST00000373063 CRCT1Q9UGL9 99 aa10.17□□□□□ -0.78
FOXP4-204ENST00000373063 KRTAP10-12P60413 245 aa10.12□□□□□ -0.79
FOXP4-204ENST00000373063 KRTAP10-4P60372 401 aaPredicted RBP10.1□□□□□ -0.79
FOXP4-204ENST00000373063 ALMS1Q8TCU4 4167 aa10.08□□□□□ -0.8
FOXP4-204ENST00000373063 CSMD1Q96PZ7 3565 aa10.07□□□□□ -0.8
FOXP4-204ENST00000373063 HUWE1Q7Z6Z7 4374 aaKnown RBP10.01□□□□□ -0.81
FOXP4-204ENST00000373063 FBN3Q75N90 2809 aa9.92□□□□□ -0.82
FOXP4-204ENST00000373063 KRTAP3-3Q9BYR6 98 aa9.92□□□□□ -0.82
FOXP4-204ENST00000373063 SRRM2Q9UQ35 2752 aaKnown RBP9.87□□□□□ -0.83
FOXP4-204ENST00000373063 KRTAP3-2Q9BYR7 98 aa9.86□□□□□ -0.83
FOXP4-204ENST00000373063 SMG1Q96Q15 3661 aaKnown RBP9.85□□□□□ -0.83
FOXP4-204ENST00000373063 DMDP11532 3685 aa9.84□□□□□ -0.83
FOXP4-204ENST00000373063 MEGF8Q7Z7M0 2845 aa9.82□□□□□ -0.84
FOXP4-204ENST00000373063 TRRAPQ9Y4A5 3859 aa9.8□□□□□ -0.84
FOXP4-204ENST00000373063 CSMD2Q7Z408 3487 aa9.8□□□□□ -0.84
FOXP4-204ENST00000373063 KRTAP12-3P60328 96 aa9.72□□□□□ -0.85
FOXP4-204ENST00000373063 SVEP1Q4LDE5 3571 aa9.71□□□□□ -0.86
FOXP4-204ENST00000373063 CUBNO60494 3623 aa9.7□□□□□ -0.86
FOXP4-204ENST00000373063 COL7A1Q02388 2944 aa9.66□□□□□ -0.86
FOXP4-204ENST00000373063 MUC3AQ02505 3323 aa9.64□□□□□ -0.87
FOXP4-204ENST00000373063 LCE3AQ5TA76 89 aa9.62□□□□□ -0.87
FOXP4-204ENST00000373063 KRTAP8-1Q8IUC2 63 aa9.6□□□□□ -0.87
FOXP4-204ENST00000373063 SPENQ96T58 3664 aaKnown RBP9.55□□□□□ -0.88
FOXP4-204ENST00000373063 LORP23490 312 aaPredicted RBP9.52□□□□□ -0.89
FOXP4-204ENST00000373063 BSNQ9UPA5 3926 aa9.42□□□□□ -0.9
FOXP4-204ENST00000373063 INE1O15225 51 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms