RNA–Protein interactions for RNA: ENST00000372443.6

KCNMA1-209, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-209ENST00000372443 CRYBG3Q68DQ2 2970 aa12.31□□□□□ -0.44
KCNMA1-209ENST00000372443 KRTAP10-2P60368 255 aa12.31□□□□□ -0.44
KCNMA1-209ENST00000372443 Q6ZR54 194 aa12.29□□□□□ -0.44
KCNMA1-209ENST00000372443 KRTAP11-1Q8IUC1 163 aa12.29□□□□□ -0.44
KCNMA1-209ENST00000372443 KRTAP10-1P60331 282 aa12.28□□□□□ -0.44
KCNMA1-209ENST00000372443 KRTAP7-1Q8IUC3 87 aa12.26□□□□□ -0.45
KCNMA1-209ENST00000372443 HRNRQ86YZ3 2850 aaPredicted RBP12.26□□□□□ -0.45
KCNMA1-209ENST00000372443 A0A087X002 238 aa12.26□□□□□ -0.45
KCNMA1-209ENST00000372443 NOTCH2NLQ7Z3S9 236 aa12.26□□□□□ -0.45
KCNMA1-209ENST00000372443 TENM4Q6N022 2769 aa12.21□□□□□ -0.46
KCNMA1-209ENST00000372443 CAMK2N1Q7Z7J9 78 aa12.14□□□□□ -0.47
KCNMA1-209ENST00000372443 M0R2T5 61 aa12.13□□□□□ -0.47
KCNMA1-209ENST00000372443 S4R3F8 94 aa12.11□□□□□ -0.47
KCNMA1-209ENST00000372443 ROMO1P60602 79 aa12.07□□□□□ -0.48
KCNMA1-209ENST00000372443 Q6ZRN7 208 aaPredicted RBP12.03□□□□□ -0.48
KCNMA1-209ENST00000372443 RPL37P61927 97 aaKnown RBP12.01□□□□□ -0.49
KCNMA1-209ENST00000372443 WDFY3Q8IZQ1 3526 aa11.98□□□□□ -0.49
KCNMA1-209ENST00000372443 H1FX-AS1Q4G0G2 97 aa11.96□□□□□ -0.49
KCNMA1-209ENST00000372443 Q5VSD8 79 aa11.95□□□□□ -0.5
KCNMA1-209ENST00000372443 SPATA8Q6RVD6 105 aa11.95□□□□□ -0.5
KCNMA1-209ENST00000372443 MXRA5Q9NR99 2828 aa11.95□□□□□ -0.5
KCNMA1-209ENST00000372443 A8MU10 97 aa11.94□□□□□ -0.5
KCNMA1-209ENST00000372443 A6NN06 94 aa11.93□□□□□ -0.5
KCNMA1-209ENST00000372443 DCHS1Q96JQ0 3298 aa11.93□□□□□ -0.5
KCNMA1-209ENST00000372443 R4GN34 69 aa11.92□□□□□ -0.5
KCNMA1-209ENST00000372443 KRTAP13-1Q8IUC0 172 aa11.92□□□□□ -0.5
KCNMA1-209ENST00000372443 SEC61BP60468 96 aaKnown RBP11.91□□□□□ -0.5
KCNMA1-209ENST00000372443 RELNP78509 3460 aa11.89□□□□□ -0.51
KCNMA1-209ENST00000372443 TENM3Q9P273 2699 aa11.85□□□□□ -0.51
KCNMA1-209ENST00000372443 KRTAP13-2Q52LG2 175 aa11.82□□□□□ -0.52
KCNMA1-209ENST00000372443 KRTAP25-1Q3LHN0 102 aa11.79□□□□□ -0.52
KCNMA1-209ENST00000372443 CELSR1Q9NYQ6 3014 aa11.76□□□□□ -0.53
KCNMA1-209ENST00000372443 M0QZ58 72 aa11.74□□□□□ -0.53
KCNMA1-209ENST00000372443 ADM2Q7Z4H4 148 aa11.72□□□□□ -0.53
KCNMA1-209ENST00000372443 NDUFAF8A1L188 74 aa11.71□□□□□ -0.53
KCNMA1-209ENST00000372443 ASPMQ8IZT6 3477 aa11.71□□□□□ -0.54
KCNMA1-209ENST00000372443 TENM1Q9UKZ4 2725 aa11.68□□□□□ -0.54
KCNMA1-209ENST00000372443 ZFHX4Q86UP3 3567 aa11.65□□□□□ -0.54
KCNMA1-209ENST00000372443 RPS29P62273 56 aaKnown RBP11.64□□□□□ -0.55
KCNMA1-209ENST00000372443 LAMA5O15230 3695 aa11.61□□□□□ -0.55
KCNMA1-209ENST00000372443 PKD1L1Q8TDX9 2849 aa11.53□□□□□ -0.56
KCNMA1-209ENST00000372443 PDZD2O15018 2839 aa11.51□□□□□ -0.57
KCNMA1-209ENST00000372443 PLAC4Q8WY50 150 aa11.45□□□□□ -0.58
KCNMA1-209ENST00000372443 CSMD1Q96PZ7 3565 aa11.42□□□□□ -0.58
KCNMA1-209ENST00000372443 MUC3AQ02505 3323 aa11.41□□□□□ -0.58
KCNMA1-209ENST00000372443 TGP01266 2768 aa11.4□□□□□ -0.58
KCNMA1-209ENST00000372443 FBN1P35555 2871 aaKnown RBP11.36□□□□□ -0.59
KCNMA1-209ENST00000372443 VWFP04275 2813 aa11.35□□□□□ -0.59
KCNMA1-209ENST00000372443 A8MUU9 505 aa11.35□□□□□ -0.59
KCNMA1-209ENST00000372443 TENM2Q9NT68 2774 aa11.34□□□□□ -0.59
KCNMA1-209ENST00000372443 KRTAP1-4P0C5Y4 121 aa11.29□□□□□ -0.6
KCNMA1-209ENST00000372443 C20orf166-AS1Q96NR2 134 aa11.29□□□□□ -0.6
KCNMA1-209ENST00000372443 DMDP11532 3685 aa11.27□□□□□ -0.61
KCNMA1-209ENST00000372443 SMG1Q96Q15 3661 aaKnown RBP11.26□□□□□ -0.61
KCNMA1-209ENST00000372443 CUBNO60494 3623 aa11.2□□□□□ -0.62
KCNMA1-209ENST00000372443 SVEP1Q4LDE5 3571 aa11.11□□□□□ -0.63
KCNMA1-209ENST00000372443 H0YAA0 97 aa11.07□□□□□ -0.64
KCNMA1-209ENST00000372443 SRRM2Q9UQ35 2752 aaKnown RBP11.03□□□□□ -0.64
KCNMA1-209ENST00000372443 OTOGQ6ZRI0 2925 aa11.02□□□□□ -0.64
KCNMA1-209ENST00000372443 C10orf95Q9H7T3 257 aa10.99□□□□□ -0.65
KCNMA1-209ENST00000372443 XP32Q5T750 250 aa10.98□□□□□ -0.65
KCNMA1-209ENST00000372443 NBPF19A0A087WUL8 3843 aa10.91□□□□□ -0.66
KCNMA1-209ENST00000372443 ZFHX3Q15911 3703 aa10.89□□□□□ -0.67
KCNMA1-209ENST00000372443 KRTAP13-3Q3SY46 172 aa10.87□□□□□ -0.67
KCNMA1-209ENST00000372443 A0A1B0GVY2 172 aa10.83□□□□□ -0.68
KCNMA1-209ENST00000372443 PP632Q6XCG6 107 aa10.83□□□□□ -0.68
KCNMA1-209ENST00000372443 FBN3Q75N90 2809 aa10.82□□□□□ -0.68
KCNMA1-209ENST00000372443 TNP1P09430 55 aa10.81□□□□□ -0.68
KCNMA1-209ENST00000372443 CSMD2Q7Z408 3487 aa10.8□□□□□ -0.68
KCNMA1-209ENST00000372443 P0C880 135 aa10.77□□□□□ -0.68
KCNMA1-209ENST00000372443 TPRXLQ17RH7 258 aa10.71□□□□□ -0.69
KCNMA1-209ENST00000372443 SPENQ96T58 3664 aaKnown RBP10.62□□□□□ -0.71
KCNMA1-209ENST00000372443 MEGF8Q7Z7M0 2845 aa10.59□□□□□ -0.71
KCNMA1-209ENST00000372443 COL7A1Q02388 2944 aa10.58□□□□□ -0.72
KCNMA1-209ENST00000372443 KRTAP10-8P60410 259 aa10.55□□□□□ -0.72
KCNMA1-209ENST00000372443 TRRAPQ9Y4A5 3859 aa10.49□□□□□ -0.73
KCNMA1-209ENST00000372443 KRTAP3-1Q9BYR8 98 aa10.36□□□□□ -0.75
KCNMA1-209ENST00000372443 ANK3Q12955 4377 aaKnown RBP10.35□□□□□ -0.75
KCNMA1-209ENST00000372443 KRTAP12-2P59991 146 aa10.34□□□□□ -0.75
KCNMA1-209ENST00000372443 KRTAP10-10P60014 251 aa10.3□□□□□ -0.76
KCNMA1-209ENST00000372443 BSNQ9UPA5 3926 aa10.19□□□□□ -0.78
KCNMA1-209ENST00000372443 KRTAP12-1P59990 96 aa10.17□□□□□ -0.78
KCNMA1-209ENST00000372443 PRO2289Q9P1D8 64 aa10.09□□□□□ -0.79
KCNMA1-209ENST00000372443 KRTAP13-4Q3LI77 160 aa10.08□□□□□ -0.8
KCNMA1-209ENST00000372443 KRTAP10-6P60371 365 aaPredicted RBP10.04□□□□□ -0.8
KCNMA1-209ENST00000372443 VPS13CQ709C8 3753 aa10.03□□□□□ -0.8
KCNMA1-209ENST00000372443 CSMD3Q7Z407 3707 aa9.8□□□□□ -0.84
KCNMA1-209ENST00000372443 MT1HL1P0DM35 61 aa9.78□□□□□ -0.84
KCNMA1-209ENST00000372443 KRTAP10-4P60372 401 aaPredicted RBP9.73□□□□□ -0.85
KCNMA1-209ENST00000372443 KRTAP3-2Q9BYR7 98 aa9.71□□□□□ -0.86
KCNMA1-209ENST00000372443 KRTAP3-3Q9BYR6 98 aa9.71□□□□□ -0.86
KCNMA1-209ENST00000372443 HUWE1Q7Z6Z7 4374 aaKnown RBP9.65□□□□□ -0.86
KCNMA1-209ENST00000372443 INE1O15225 51 aa9.65□□□□□ -0.87
KCNMA1-209ENST00000372443 ALMS1Q8TCU4 4167 aa9.6□□□□□ -0.87
KCNMA1-209ENST00000372443 ZNF469Q96JG9 3925 aaPredicted RBP9.58□□□□□ -0.88
KCNMA1-209ENST00000372443 KRTAP15-1Q3LI76 137 aa9.48□□□□□ -0.89
KCNMA1-209ENST00000372443 KRTAP4-5Q9BYR2 181 aa9.37□□□□□ -0.91
KCNMA1-209ENST00000372443 DNAH9Q9NYC9 4486 aa9.33□□□□□ -0.92
KCNMA1-209ENST00000372443 AKAP9Q99996 3911 aa9.29□□□□□ -0.92
KCNMA1-209ENST00000372443 DNAH5Q8TE73 4624 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms