RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 IGLV7-46A0A075B6I9 117 aa9.92□□□□□ -0.82
PCIF1-201ENST00000372409 CIRBP-AS1Q8TBR5 109 aa9.92□□□□□ -0.82
PCIF1-201ENST00000372409 CD164Q04900 197 aa9.91□□□□□ -0.82
PCIF1-201ENST00000372409 COA5Q86WW8 74 aa9.91□□□□□ -0.82
PCIF1-201ENST00000372409 IGLV7-43P04211 117 aa9.9□□□□□ -0.82
PCIF1-201ENST00000372409 DNAH6Q9C0G6 4158 aa9.9□□□□□ -0.82
PCIF1-201ENST00000372409 DNAH17Q9UFH2 4485 aa9.9□□□□□ -0.83
PCIF1-201ENST00000372409 LY6G6CO95867 125 aa9.89□□□□□ -0.83
PCIF1-201ENST00000372409 Q8N9P0 234 aaPredicted RBP9.89□□□□□ -0.83
PCIF1-201ENST00000372409 PRR15LQ9BU68 103 aa9.85□□□□□ -0.83
PCIF1-201ENST00000372409 Q5VV11 94 aa9.85□□□□□ -0.83
PCIF1-201ENST00000372409 C1orf195Q5TG92 126 aa9.84□□□□□ -0.83
PCIF1-201ENST00000372409 LIMD2Q9BT23 127 aa9.84□□□□□ -0.83
PCIF1-201ENST00000372409 CHKB-CPT1BH3BT56 60 aa9.82□□□□□ -0.84
PCIF1-201ENST00000372409 KRTAP10-2P60368 255 aa9.78□□□□□ -0.84
PCIF1-201ENST00000372409 Q5W150 140 aa9.77□□□□□ -0.84
PCIF1-201ENST00000372409 A8MU10 97 aa9.77□□□□□ -0.85
PCIF1-201ENST00000372409 HYDINQ4G0P3 5121 aa9.76□□□□□ -0.85
PCIF1-201ENST00000372409 SPAG11AQ6PDA7 123 aa9.76□□□□□ -0.85
PCIF1-201ENST00000372409 SSBP3-AS1Q7Z2R9 100 aa9.75□□□□□ -0.85
PCIF1-201ENST00000372409 DNAH11Q96DT5 4516 aa9.74□□□□□ -0.85
PCIF1-201ENST00000372409 LOC101927531A0A1B0GV80 90 aa9.74□□□□□ -0.85
PCIF1-201ENST00000372409 HRES1P13985 223 aa9.74□□□□□ -0.85
PCIF1-201ENST00000372409 ALMS1Q8TCU4 4167 aa9.72□□□□□ -0.85
PCIF1-201ENST00000372409 A6NED7 52 aa9.69□□□□□ -0.86
PCIF1-201ENST00000372409 RETNLBQ9BQ08 111 aa9.69□□□□□ -0.86
PCIF1-201ENST00000372409 C8orf87E5RJ46 101 aa9.69□□□□□ -0.86
PCIF1-201ENST00000372409 Q75L30 129 aa9.68□□□□□ -0.86
PCIF1-201ENST00000372409 LINC00313P59037 77 aa9.68□□□□□ -0.86
PCIF1-201ENST00000372409 KRTAP13-3Q3SY46 172 aa9.68□□□□□ -0.86
PCIF1-201ENST00000372409 DNAH5Q8TE73 4624 aa9.67□□□□□ -0.86
PCIF1-201ENST00000372409 KRTAP13-2Q52LG2 175 aa9.66□□□□□ -0.86
PCIF1-201ENST00000372409 KRTAP10-1P60331 282 aa9.64□□□□□ -0.87
PCIF1-201ENST00000372409 LINC01558Q9Y6Z2 57 aa9.64□□□□□ -0.87
PCIF1-201ENST00000372409 SPTSSBQ8NFR3 76 aa9.63□□□□□ -0.87
PCIF1-201ENST00000372409 LRP1BQ9NZR2 4599 aa9.62□□□□□ -0.87
PCIF1-201ENST00000372409 PRR26Q8N8Z3 221 aa9.62□□□□□ -0.87
PCIF1-201ENST00000372409 PMAIP1Q13794 54 aa9.62□□□□□ -0.87
PCIF1-201ENST00000372409 LCA10Q71F78 164 aa9.61□□□□□ -0.87
PCIF1-201ENST00000372409 FAM229AH3BQW9 127 aa9.58□□□□□ -0.88
PCIF1-201ENST00000372409 ACYP2P14621 99 aa9.58□□□□□ -0.88
PCIF1-201ENST00000372409 Q6ZSA8 131 aa9.58□□□□□ -0.88
PCIF1-201ENST00000372409 FAT2Q9NYQ8 4349 aa9.54□□□□□ -0.88
PCIF1-201ENST00000372409 KRTAP1-4P0C5Y4 121 aa9.53□□□□□ -0.88
PCIF1-201ENST00000372409 SPINK7P58062 85 aa9.52□□□□□ -0.89
PCIF1-201ENST00000372409 PKD1P98161 4303 aa9.52□□□□□ -0.89
PCIF1-201ENST00000372409 CDC42SE1Q9NRR8 79 aa9.52□□□□□ -0.89
PCIF1-201ENST00000372409 PKHD1P08F94 4074 aa9.51□□□□□ -0.89
PCIF1-201ENST00000372409 IGKV2-30P06310 120 aa9.5□□□□□ -0.89
PCIF1-201ENST00000372409 C4orf48Q5BLP8 95 aa9.5□□□□□ -0.89
PCIF1-201ENST00000372409 PLA2G1BP04054 148 aaKnown RBP9.5□□□□□ -0.89
PCIF1-201ENST00000372409 ATP11AUNQ6ZP68 121 aa9.5□□□□□ -0.89
PCIF1-201ENST00000372409 DMAC1Q96GE9 116 aa9.5□□□□□ -0.89
PCIF1-201ENST00000372409 KRTAP16-1A8MUX0 517 aa9.49□□□□□ -0.89
PCIF1-201ENST00000372409 VPS13BQ7Z7G8 4022 aa9.49□□□□□ -0.89
PCIF1-201ENST00000372409 IGKV2D-30A0A075B6S6 120 aa9.47□□□□□ -0.89
PCIF1-201ENST00000372409 SEC61GP60059 68 aa9.47□□□□□ -0.89
PCIF1-201ENST00000372409 TYMSOSQ8TAI1 123 aa9.47□□□□□ -0.89
PCIF1-201ENST00000372409 SPINK1P00995 79 aa9.39□□□□□ -0.91
PCIF1-201ENST00000372409 A0A1B0GU69 56 aa9.36□□□□□ -0.91
PCIF1-201ENST00000372409 A6NN06 94 aa9.36□□□□□ -0.91
PCIF1-201ENST00000372409 C7orf65Q6ZTY9 151 aa9.36□□□□□ -0.91
PCIF1-201ENST00000372409 KTN1-AS1Q86SY8 53 aa9.35□□□□□ -0.91
PCIF1-201ENST00000372409 LINC00304Q8N9R0 145 aa9.32□□□□□ -0.92
PCIF1-201ENST00000372409 SMR3BP02814 79 aaPredicted RBP9.3□□□□□ -0.92
PCIF1-201ENST00000372409 FAT1Q14517 4588 aa9.26□□□□□ -0.93
PCIF1-201ENST00000372409 SACSQ9NZJ4 4579 aa9.26□□□□□ -0.93
PCIF1-201ENST00000372409 Q8N1X5 172 aa9.25□□□□□ -0.93
PCIF1-201ENST00000372409 C9orf92A6NGG3 77 aa9.21□□□□□ -0.93
PCIF1-201ENST00000372409 RPS29P62273 56 aaKnown RBP9.18□□□□□ -0.94
PCIF1-201ENST00000372409 UQCR11O14957 56 aa9.17□□□□□ -0.94
PCIF1-201ENST00000372409 DYNC1H1Q14204 4646 aaKnown RBP9.16□□□□□ -0.94
PCIF1-201ENST00000372409 MIR22HGQ0VDD5 57 aa9.16□□□□□ -0.94
PCIF1-201ENST00000372409 KMT2CQ8NEZ4 4911 aaKnown RBP9.15□□□□□ -0.94
PCIF1-201ENST00000372409 SPATA8Q6RVD6 105 aa9.14□□□□□ -0.95
PCIF1-201ENST00000372409 RBM12B-AS1Q9P1G2 102 aa9.14□□□□□ -0.95
PCIF1-201ENST00000372409 A8MUU9 505 aa9.05□□□□□ -0.96
PCIF1-201ENST00000372409 C20orf166-AS1Q96NR2 134 aa9.05□□□□□ -0.96
PCIF1-201ENST00000372409 A0A1B0GVY2 172 aa9.02□□□□□ -0.97
PCIF1-201ENST00000372409 KRTAP10-4P60372 401 aaPredicted RBP9.02□□□□□ -0.97
PCIF1-201ENST00000372409 PRAC1Q96KF2 57 aa9.02□□□□□ -0.97
PCIF1-201ENST00000372409 APOBP04114 4563 aaKnown RBP9□□□□□ -0.97
PCIF1-201ENST00000372409 ADM2Q7Z4H4 148 aa9□□□□□ -0.97
PCIF1-201ENST00000372409 KRTAP21-3Q3LHN1 58 aa8.97□□□□□ -0.97
PCIF1-201ENST00000372409 PKHD1L1Q86WI1 4243 aa8.96□□□□□ -0.97
PCIF1-201ENST00000372409 KRTAP3-1Q9BYR8 98 aa8.96□□□□□ -0.98
PCIF1-201ENST00000372409 LRP1Q07954 4544 aaKnown RBP8.96□□□□□ -0.98
PCIF1-201ENST00000372409 RYR2Q92736 4967 aa8.95□□□□□ -0.98
PCIF1-201ENST00000372409 FLG2Q5D862 2391 aaPredicted RBP8.87□□□□□ -0.99
PCIF1-201ENST00000372409 H0YAA0 97 aa8.85□□□□□ -0.99
PCIF1-201ENST00000372409 A0A1B0GU33 70 aa8.83□□□□□ -1
PCIF1-201ENST00000372409 MYCBP2O75592 4640 aa8.83□□□□□ -1
PCIF1-201ENST00000372409 RYR3Q15413 4870 aa8.82□□□□□ -1
PCIF1-201ENST00000372409 COX6B2Q6YFQ2 88 aa8.82□□□□□ -1
PCIF1-201ENST00000372409 DMBT1Q9UGM3 2413 aaPredicted RBP8.79□□□□□ -1
PCIF1-201ENST00000372409 H1FX-AS1Q4G0G2 97 aa8.78□□□□□ -1
PCIF1-201ENST00000372409 CSAG1Q6PB30 78 aa8.74□□□□□ -1.01
PCIF1-201ENST00000372409 FAT3Q8TDW7 4589 aa8.73□□□□□ -1.01
PCIF1-201ENST00000372409 Q5VSD8 79 aa8.71□□□□□ -1.01
PCIF1-201ENST00000372409 HSPG2P98160 4391 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 226.5 ms