RNA–Protein interactions for RNA: ENST00000371021.4

FRAT1-201, Transcript of FRAT1, WNT signaling pathway regulator, humanhuman

APPRIS P1 BASIC

Gene FRAT1, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAT1-201ENST00000371021 CDK2AP2O75956 126 aa12.89□□□□□ -0.35
FRAT1-201ENST00000371021 SPINK6Q6UWN8 80 aa12.89□□□□□ -0.35
FRAT1-201ENST00000371021 DNAH11Q96DT5 4516 aa12.88□□□□□ -0.35
FRAT1-201ENST00000371021 CIRBP-AS1Q8TBR5 109 aa12.88□□□□□ -0.35
FRAT1-201ENST00000371021 DNAH5Q8TE73 4624 aa12.87□□□□□ -0.35
FRAT1-201ENST00000371021 ALMS1Q8TCU4 4167 aa12.87□□□□□ -0.35
FRAT1-201ENST00000371021 SEC61GP60059 68 aa12.86□□□□□ -0.35
FRAT1-201ENST00000371021 A8MU10 97 aa12.85□□□□□ -0.35
FRAT1-201ENST00000371021 PCOTHQ58A44 107 aa12.84□□□□□ -0.35
FRAT1-201ENST00000371021 SPANXA2-OT1Q8N9U9 137 aa12.82□□□□□ -0.36
FRAT1-201ENST00000371021 TP53AIP1Q9HCN2 124 aa12.8□□□□□ -0.36
FRAT1-201ENST00000371021 Q5VV11 94 aa12.8□□□□□ -0.36
FRAT1-201ENST00000371021 MRPL34Q9BQ48 92 aaKnown RBP12.79□□□□□ -0.36
FRAT1-201ENST00000371021 HYDINQ4G0P3 5121 aa12.77□□□□□ -0.36
FRAT1-201ENST00000371021 Q8N9P0 234 aaPredicted RBP12.75□□□□□ -0.37
FRAT1-201ENST00000371021 PMAIP1Q13794 54 aa12.75□□□□□ -0.37
FRAT1-201ENST00000371021 CD164Q04900 197 aa12.75□□□□□ -0.37
FRAT1-201ENST00000371021 LRP1BQ9NZR2 4599 aa12.74□□□□□ -0.37
FRAT1-201ENST00000371021 KRTAP10-1P60331 282 aa12.74□□□□□ -0.37
FRAT1-201ENST00000371021 IGLV7-46A0A075B6I9 117 aa12.71□□□□□ -0.37
FRAT1-201ENST00000371021 SSBP3-AS1Q7Z2R9 100 aa12.69□□□□□ -0.38
FRAT1-201ENST00000371021 PRR15LQ9BU68 103 aa12.69□□□□□ -0.38
FRAT1-201ENST00000371021 CHKB-CPT1BH3BT56 60 aa12.68□□□□□ -0.38
FRAT1-201ENST00000371021 PKD1P98161 4303 aa12.68□□□□□ -0.38
FRAT1-201ENST00000371021 Q5W150 140 aa12.67□□□□□ -0.38
FRAT1-201ENST00000371021 KRTAP13-2Q52LG2 175 aa12.66□□□□□ -0.38
FRAT1-201ENST00000371021 COA5Q86WW8 74 aa12.65□□□□□ -0.38
FRAT1-201ENST00000371021 FAT2Q9NYQ8 4349 aa12.65□□□□□ -0.38
FRAT1-201ENST00000371021 LIMD2Q9BT23 127 aa12.64□□□□□ -0.39
FRAT1-201ENST00000371021 Q6ZSA8 131 aa12.63□□□□□ -0.39
FRAT1-201ENST00000371021 KRTAP13-3Q3SY46 172 aa12.54□□□□□ -0.4
FRAT1-201ENST00000371021 VPS13BQ7Z7G8 4022 aa12.54□□□□□ -0.4
FRAT1-201ENST00000371021 LCA10Q71F78 164 aa12.54□□□□□ -0.4
FRAT1-201ENST00000371021 RETNLBQ9BQ08 111 aa12.53□□□□□ -0.4
FRAT1-201ENST00000371021 LINC00313P59037 77 aa12.52□□□□□ -0.4
FRAT1-201ENST00000371021 KRTAP1-4P0C5Y4 121 aa12.51□□□□□ -0.41
FRAT1-201ENST00000371021 Q75L30 129 aa12.51□□□□□ -0.41
FRAT1-201ENST00000371021 SPTSSBQ8NFR3 76 aa12.51□□□□□ -0.41
FRAT1-201ENST00000371021 LOC101927531A0A1B0GV80 90 aa12.5□□□□□ -0.41
FRAT1-201ENST00000371021 A6NED7 52 aa12.5□□□□□ -0.41
FRAT1-201ENST00000371021 C8orf87E5RJ46 101 aa12.5□□□□□ -0.41
FRAT1-201ENST00000371021 HRES1P13985 223 aa12.49□□□□□ -0.41
FRAT1-201ENST00000371021 SPAG11AQ6PDA7 123 aa12.48□□□□□ -0.41
FRAT1-201ENST00000371021 PLA2G1BP04054 148 aaKnown RBP12.42□□□□□ -0.42
FRAT1-201ENST00000371021 PKHD1P08F94 4074 aa12.39□□□□□ -0.43
FRAT1-201ENST00000371021 LINC01558Q9Y6Z2 57 aa12.38□□□□□ -0.43
FRAT1-201ENST00000371021 ATP11AUNQ6ZP68 121 aa12.36□□□□□ -0.43
FRAT1-201ENST00000371021 TYMSOSQ8TAI1 123 aa12.36□□□□□ -0.43
FRAT1-201ENST00000371021 KRTAP16-1A8MUX0 517 aa12.35□□□□□ -0.43
FRAT1-201ENST00000371021 FAM229AH3BQW9 127 aa12.34□□□□□ -0.43
FRAT1-201ENST00000371021 PRR26Q8N8Z3 221 aa12.34□□□□□ -0.43
FRAT1-201ENST00000371021 CDC42SE1Q9NRR8 79 aa12.34□□□□□ -0.43
FRAT1-201ENST00000371021 C4orf48Q5BLP8 95 aa12.33□□□□□ -0.44
FRAT1-201ENST00000371021 KTN1-AS1Q86SY8 53 aa12.33□□□□□ -0.44
FRAT1-201ENST00000371021 SPINK7P58062 85 aa12.32□□□□□ -0.44
FRAT1-201ENST00000371021 A6NN06 94 aa12.3□□□□□ -0.44
FRAT1-201ENST00000371021 SACSQ9NZJ4 4579 aa12.3□□□□□ -0.44
FRAT1-201ENST00000371021 SMR3BP02814 79 aaPredicted RBP12.28□□□□□ -0.44
FRAT1-201ENST00000371021 IGKV2-30P06310 120 aa12.26□□□□□ -0.45
FRAT1-201ENST00000371021 RBM12B-AS1Q9P1G2 102 aa12.26□□□□□ -0.45
FRAT1-201ENST00000371021 ACYP2P14621 99 aa12.24□□□□□ -0.45
FRAT1-201ENST00000371021 SPINK1P00995 79 aa12.22□□□□□ -0.45
FRAT1-201ENST00000371021 IGKV2D-30A0A075B6S6 120 aa12.22□□□□□ -0.45
FRAT1-201ENST00000371021 DYNC1H1Q14204 4646 aaKnown RBP12.21□□□□□ -0.45
FRAT1-201ENST00000371021 DMAC1Q96GE9 116 aa12.2□□□□□ -0.46
FRAT1-201ENST00000371021 LINC00304Q8N9R0 145 aa12.16□□□□□ -0.46
FRAT1-201ENST00000371021 FAT1Q14517 4588 aa12.15□□□□□ -0.47
FRAT1-201ENST00000371021 KRTAP21-3Q3LHN1 58 aa12.13□□□□□ -0.47
FRAT1-201ENST00000371021 C7orf65Q6ZTY9 151 aa12.07□□□□□ -0.48
FRAT1-201ENST00000371021 A0A1B0GVY2 172 aa12.02□□□□□ -0.49
FRAT1-201ENST00000371021 APOBP04114 4563 aaKnown RBP12.02□□□□□ -0.49
FRAT1-201ENST00000371021 C9orf92A6NGG3 77 aa12□□□□□ -0.49
FRAT1-201ENST00000371021 KRTAP10-4P60372 401 aaPredicted RBP11.98□□□□□ -0.49
FRAT1-201ENST00000371021 RPS29P62273 56 aaKnown RBP11.97□□□□□ -0.49
FRAT1-201ENST00000371021 Q8N1X5 172 aa11.94□□□□□ -0.5
FRAT1-201ENST00000371021 A0A1B0GU69 56 aa11.91□□□□□ -0.5
FRAT1-201ENST00000371021 RYR2Q92736 4967 aa11.91□□□□□ -0.5
FRAT1-201ENST00000371021 PRAC1Q96KF2 57 aa11.9□□□□□ -0.51
FRAT1-201ENST00000371021 PKHD1L1Q86WI1 4243 aa11.89□□□□□ -0.51
FRAT1-201ENST00000371021 KMT2CQ8NEZ4 4911 aaKnown RBP11.87□□□□□ -0.51
FRAT1-201ENST00000371021 ADM2Q7Z4H4 148 aa11.86□□□□□ -0.51
FRAT1-201ENST00000371021 A8MUU9 505 aa11.8□□□□□ -0.52
FRAT1-201ENST00000371021 C20orf166-AS1Q96NR2 134 aa11.79□□□□□ -0.52
FRAT1-201ENST00000371021 SPATA8Q6RVD6 105 aa11.76□□□□□ -0.53
FRAT1-201ENST00000371021 MIR22HGQ0VDD5 57 aa11.72□□□□□ -0.53
FRAT1-201ENST00000371021 LRP1Q07954 4544 aaKnown RBP11.7□□□□□ -0.54
FRAT1-201ENST00000371021 FLG2Q5D862 2391 aaPredicted RBP11.69□□□□□ -0.54
FRAT1-201ENST00000371021 UQCR11O14957 56 aa11.69□□□□□ -0.54
FRAT1-201ENST00000371021 KRTAP3-1Q9BYR8 98 aa11.67□□□□□ -0.54
FRAT1-201ENST00000371021 FAT3Q8TDW7 4589 aa11.58□□□□□ -0.56
FRAT1-201ENST00000371021 TNXBP22105 4242 aa11.57□□□□□ -0.56
FRAT1-201ENST00000371021 HSPG2P98160 4391 aa11.54□□□□□ -0.56
FRAT1-201ENST00000371021 Q5VSD8 79 aa11.52□□□□□ -0.57
FRAT1-201ENST00000371021 KRTAP10-8P60410 259 aa11.51□□□□□ -0.57
FRAT1-201ENST00000371021 LINC01554Q52M75 96 aa11.51□□□□□ -0.57
FRAT1-201ENST00000371021 DMBT1Q9UGM3 2413 aaPredicted RBP11.49□□□□□ -0.57
FRAT1-201ENST00000371021 RYR3Q15413 4870 aa11.49□□□□□ -0.57
FRAT1-201ENST00000371021 KRTAP17-1Q9BYP8 105 aa11.46□□□□□ -0.57
FRAT1-201ENST00000371021 MYCBP2O75592 4640 aa11.43□□□□□ -0.58
FRAT1-201ENST00000371021 CSAG1Q6PB30 78 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms