RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 LAMA1P25391 3075 aa9.76□□□□□ -0.85
CHRNA4-201ENST00000370263 ATMQ13315 3056 aa9.76□□□□□ -0.85
CHRNA4-201ENST00000370263 TACC2O95359 2948 aa9.76□□□□□ -0.85
CHRNA4-201ENST00000370263 CDH23Q9H251 3354 aa9.76□□□□□ -0.85
CHRNA4-201ENST00000370263 VCANP13611 3396 aa9.75□□□□□ -0.85
CHRNA4-201ENST00000370263 DNAH14Q0VDD8 3507 aa9.72□□□□□ -0.85
CHRNA4-201ENST00000370263 HIVEP1P15822 2718 aa9.71□□□□□ -0.86
CHRNA4-201ENST00000370263 FLNCQ14315 2725 aa9.69□□□□□ -0.86
CHRNA4-201ENST00000370263 TNP1P09430 55 aa9.69□□□□□ -0.86
CHRNA4-201ENST00000370263 PP632Q6XCG6 107 aa9.64□□□□□ -0.87
CHRNA4-201ENST00000370263 P0C880 135 aa9.63□□□□□ -0.87
CHRNA4-201ENST00000370263 BOD1L1Q8NFC6 3051 aa9.63□□□□□ -0.87
CHRNA4-201ENST00000370263 NIPBLQ6KC79 2804 aaeCLIP9.62□□□□□ -0.87
CHRNA4-201ENST00000370263 COL12A1Q99715 3063 aa9.62□□□□□ -0.87
CHRNA4-201ENST00000370263 KMT2BQ9UMN6 2715 aaPredicted RBP9.6□□□□□ -0.87
CHRNA4-201ENST00000370263 FRYLO94915 3013 aa9.59□□□□□ -0.87
CHRNA4-201ENST00000370263 KRTAP1-4P0C5Y4 121 aa9.57□□□□□ -0.88
CHRNA4-201ENST00000370263 ZZEF1O43149 2961 aa9.57□□□□□ -0.88
CHRNA4-201ENST00000370263 CELSR2Q9HCU4 2923 aa9.55□□□□□ -0.88
CHRNA4-201ENST00000370263 COL6A3P12111 3177 aa9.52□□□□□ -0.89
CHRNA4-201ENST00000370263 SZT2Q5T011 3432 aa9.49□□□□□ -0.89
CHRNA4-201ENST00000370263 REV3LO60673 3130 aa9.46□□□□□ -0.89
CHRNA4-201ENST00000370263 KRTAP13-3Q3SY46 172 aa9.46□□□□□ -0.9
CHRNA4-201ENST00000370263 CFAP47Q6ZTR5 3102 aa9.42□□□□□ -0.9
CHRNA4-201ENST00000370263 XP32Q5T750 250 aa9.4□□□□□ -0.9
CHRNA4-201ENST00000370263 DCHS2Q6V1P9 2916 aa9.4□□□□□ -0.91
CHRNA4-201ENST00000370263 ZANQ9Y493 2812 aa9.39□□□□□ -0.91
CHRNA4-201ENST00000370263 KRTAP10-8P60410 259 aa9.38□□□□□ -0.91
CHRNA4-201ENST00000370263 HRNRQ86YZ3 2850 aaPredicted RBP9.31□□□□□ -0.92
CHRNA4-201ENST00000370263 TNRC18O15417 2968 aaPredicted RBP9.29□□□□□ -0.92
CHRNA4-201ENST00000370263 FBN2P35556 2912 aa9.23□□□□□ -0.93
CHRNA4-201ENST00000370263 TGP01266 2768 aa9.23□□□□□ -0.93
CHRNA4-201ENST00000370263 TENM4Q6N022 2769 aa9.19□□□□□ -0.94
CHRNA4-201ENST00000370263 EYSQ5T1H1 3165 aa9.18□□□□□ -0.94
CHRNA4-201ENST00000370263 CRYBG3Q68DQ2 2970 aa9.15□□□□□ -0.94
CHRNA4-201ENST00000370263 SPEGQ15772 3267 aa9.15□□□□□ -0.94
CHRNA4-201ENST00000370263 DMXL1Q9Y485 3027 aa9.15□□□□□ -0.94
CHRNA4-201ENST00000370263 NF1P21359 2839 aa9.13□□□□□ -0.95
CHRNA4-201ENST00000370263 KRTAP12-2P59991 146 aa9.1□□□□□ -0.95
CHRNA4-201ENST00000370263 TPRXLQ17RH7 258 aa9.09□□□□□ -0.95
CHRNA4-201ENST00000370263 A0A1B0GVY2 172 aa9.04□□□□□ -0.96
CHRNA4-201ENST00000370263 USP34Q70CQ2 3546 aa9.03□□□□□ -0.96
CHRNA4-201ENST00000370263 TENM3Q9P273 2699 aa9.02□□□□□ -0.97
CHRNA4-201ENST00000370263 LOC400499M0QZD8 3231 aa8.99□□□□□ -0.97
CHRNA4-201ENST00000370263 KRTAP12-1P59990 96 aa8.96□□□□□ -0.98
CHRNA4-201ENST00000370263 SPTBN5Q9NRC6 3674 aaKnown RBP8.95□□□□□ -0.98
CHRNA4-201ENST00000370263 CELSR1Q9NYQ6 3014 aa8.93□□□□□ -0.98
CHRNA4-201ENST00000370263 MXRA5Q9NR99 2828 aa8.92□□□□□ -0.98
CHRNA4-201ENST00000370263 TENM1Q9UKZ4 2725 aa8.92□□□□□ -0.98
CHRNA4-201ENST00000370263 KRTAP3-1Q9BYR8 98 aa8.91□□□□□ -0.98
CHRNA4-201ENST00000370263 KRTAP13-4Q3LI77 160 aa8.89□□□□□ -0.99
CHRNA4-201ENST00000370263 KRTAP21-3Q3LHN1 58 aa8.88□□□□□ -0.99
CHRNA4-201ENST00000370263 PDZD2O15018 2839 aa8.8□□□□□ -1
CHRNA4-201ENST00000370263 KRTAP10-10P60014 251 aa8.79□□□□□ -1
CHRNA4-201ENST00000370263 MYO15AQ9UKN7 3530 aa8.77□□□□□ -1.01
CHRNA4-201ENST00000370263 PRO2289Q9P1D8 64 aa8.74□□□□□ -1.01
CHRNA4-201ENST00000370263 KRTAP10-6P60371 365 aaPredicted RBP8.73□□□□□ -1.01
CHRNA4-201ENST00000370263 TENM2Q9NT68 2774 aa8.72□□□□□ -1.01
CHRNA4-201ENST00000370263 WDFY3Q8IZQ1 3526 aa8.65□□□□□ -1.03
CHRNA4-201ENST00000370263 KRTAP15-1Q3LI76 137 aa8.64□□□□□ -1.03
CHRNA4-201ENST00000370263 DCHS1Q96JQ0 3298 aa8.58□□□□□ -1.04
CHRNA4-201ENST00000370263 PKD1L1Q8TDX9 2849 aa8.55□□□□□ -1.04
CHRNA4-201ENST00000370263 RELNP78509 3460 aa8.55□□□□□ -1.04
CHRNA4-201ENST00000370263 CSMD1Q96PZ7 3565 aa8.47□□□□□ -1.05
CHRNA4-201ENST00000370263 VWFP04275 2813 aa8.46□□□□□ -1.05
CHRNA4-201ENST00000370263 ZFHX4Q86UP3 3567 aa8.45□□□□□ -1.06
CHRNA4-201ENST00000370263 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
CHRNA4-201ENST00000370263 INE1O15225 51 aa8.35□□□□□ -1.07
CHRNA4-201ENST00000370263 KRTAP3-3Q9BYR6 98 aa8.33□□□□□ -1.08
CHRNA4-201ENST00000370263 FBN3Q75N90 2809 aa8.32□□□□□ -1.08
CHRNA4-201ENST00000370263 ASPMQ8IZT6 3477 aa8.3□□□□□ -1.08
CHRNA4-201ENST00000370263 FBN1P35555 2871 aaKnown RBP8.28□□□□□ -1.08
CHRNA4-201ENST00000370263 MEGF8Q7Z7M0 2845 aa8.27□□□□□ -1.09
CHRNA4-201ENST00000370263 SRRM2Q9UQ35 2752 aaKnown RBP8.24□□□□□ -1.09
CHRNA4-201ENST00000370263 SMG1Q96Q15 3661 aaKnown RBP8.23□□□□□ -1.09
CHRNA4-201ENST00000370263 LAMA5O15230 3695 aa8.17□□□□□ -1.1
CHRNA4-201ENST00000370263 SVEP1Q4LDE5 3571 aa8.05□□□□□ -1.12
CHRNA4-201ENST00000370263 OTOGQ6ZRI0 2925 aa8.03□□□□□ -1.12
CHRNA4-201ENST00000370263 ANK3Q12955 4377 aaKnown RBP7.99□□□□□ -1.13
CHRNA4-201ENST00000370263 COL7A1Q02388 2944 aa7.99□□□□□ -1.13
CHRNA4-201ENST00000370263 NBPF19A0A087WUL8 3843 aa7.98□□□□□ -1.13
CHRNA4-201ENST00000370263 KRTAP23-1A1A580 65 aa7.97□□□□□ -1.13
CHRNA4-201ENST00000370263 MT1HL1P0DM35 61 aa7.94□□□□□ -1.14
CHRNA4-201ENST00000370263 CUBNO60494 3623 aa7.94□□□□□ -1.14
CHRNA4-201ENST00000370263 KRTAP10-12P60413 245 aa7.9□□□□□ -1.15
CHRNA4-201ENST00000370263 KRTAP10-4P60372 401 aaPredicted RBP7.84□□□□□ -1.15
CHRNA4-201ENST00000370263 DMDP11532 3685 aa7.83□□□□□ -1.16
CHRNA4-201ENST00000370263 KRTAP12-3P60328 96 aa7.8□□□□□ -1.16
CHRNA4-201ENST00000370263 TRRAPQ9Y4A5 3859 aa7.79□□□□□ -1.16
CHRNA4-201ENST00000370263 MUC3AQ02505 3323 aa7.77□□□□□ -1.17
CHRNA4-201ENST00000370263 ZFHX3Q15911 3703 aa7.76□□□□□ -1.17
CHRNA4-201ENST00000370263 LCE3AQ5TA76 89 aa7.74□□□□□ -1.17
CHRNA4-201ENST00000370263 SPENQ96T58 3664 aaKnown RBP7.74□□□□□ -1.17
CHRNA4-201ENST00000370263 LORP23490 312 aaPredicted RBP7.71□□□□□ -1.17
CHRNA4-201ENST00000370263 CSMD2Q7Z408 3487 aa7.71□□□□□ -1.17
CHRNA4-201ENST00000370263 HUWE1Q7Z6Z7 4374 aaKnown RBP7.65□□□□□ -1.19
CHRNA4-201ENST00000370263 CRCT1Q9UGL9 99 aa7.62□□□□□ -1.19
CHRNA4-201ENST00000370263 VPS13CQ709C8 3753 aa7.44□□□□□ -1.22
CHRNA4-201ENST00000370263 BSNQ9UPA5 3926 aa7.42□□□□□ -1.22
CHRNA4-201ENST00000370263 KRTAP4-5Q9BYR2 181 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms