RNA–Protein interactions for RNA: ENST00000369864.4

AMIGO1-202, Transcript of adhesion molecule with Ig like domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMIGO1, Length 5,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMIGO1-202ENST00000369864 HIVEP1P15822 2718 aa10.77□□□□□ -0.69
AMIGO1-202ENST00000369864 M0QZ58 72 aa10.75□□□□□ -0.69
AMIGO1-202ENST00000369864 NIPBLQ6KC79 2804 aaeCLIP10.74□□□□□ -0.69
AMIGO1-202ENST00000369864 APCP25054 2843 aa10.73□□□□□ -0.69
AMIGO1-202ENST00000369864 KRTAP11-1Q8IUC1 163 aa10.71□□□□□ -0.69
AMIGO1-202ENST00000369864 KRTAP7-1Q8IUC3 87 aa10.7□□□□□ -0.7
AMIGO1-202ENST00000369864 KRTAP10-1P60331 282 aa10.68□□□□□ -0.7
AMIGO1-202ENST00000369864 NDUFAF8A1L188 74 aa10.66□□□□□ -0.7
AMIGO1-202ENST00000369864 KRTAP10-2P60368 255 aa10.66□□□□□ -0.7
AMIGO1-202ENST00000369864 DMXL1Q9Y485 3027 aa10.64□□□□□ -0.71
AMIGO1-202ENST00000369864 LOC400499M0QZD8 3231 aa10.64□□□□□ -0.71
AMIGO1-202ENST00000369864 KMT2BQ9UMN6 2715 aaPredicted RBP10.63□□□□□ -0.71
AMIGO1-202ENST00000369864 M0R2T5 61 aa10.62□□□□□ -0.71
AMIGO1-202ENST00000369864 SPTBN5Q9NRC6 3674 aaKnown RBP10.62□□□□□ -0.71
AMIGO1-202ENST00000369864 DCHS2Q6V1P9 2916 aa10.62□□□□□ -0.71
AMIGO1-202ENST00000369864 NF1P21359 2839 aa10.53□□□□□ -0.72
AMIGO1-202ENST00000369864 USP34Q70CQ2 3546 aa10.53□□□□□ -0.72
AMIGO1-202ENST00000369864 SEC61BP60468 96 aaKnown RBP10.52□□□□□ -0.73
AMIGO1-202ENST00000369864 HRNRQ86YZ3 2850 aaPredicted RBP10.5□□□□□ -0.73
AMIGO1-202ENST00000369864 FBN2P35556 2912 aa10.5□□□□□ -0.73
AMIGO1-202ENST00000369864 TNRC18O15417 2968 aaPredicted RBP10.49□□□□□ -0.73
AMIGO1-202ENST00000369864 KRTAP13-1Q8IUC0 172 aa10.49□□□□□ -0.73
AMIGO1-202ENST00000369864 CRYBG3Q68DQ2 2970 aa10.48□□□□□ -0.73
AMIGO1-202ENST00000369864 TENM4Q6N022 2769 aa10.47□□□□□ -0.73
AMIGO1-202ENST00000369864 A8MUU9 505 aa10.46□□□□□ -0.73
AMIGO1-202ENST00000369864 MYO15AQ9UKN7 3530 aa10.44□□□□□ -0.74
AMIGO1-202ENST00000369864 PLAC4Q8WY50 150 aa10.41□□□□□ -0.74
AMIGO1-202ENST00000369864 Q5VSD8 79 aa10.41□□□□□ -0.74
AMIGO1-202ENST00000369864 Q6ZRN7 208 aaPredicted RBP10.39□□□□□ -0.75
AMIGO1-202ENST00000369864 KRTAP13-2Q52LG2 175 aa10.38□□□□□ -0.75
AMIGO1-202ENST00000369864 RPS29P62273 56 aaKnown RBP10.37□□□□□ -0.75
AMIGO1-202ENST00000369864 C20orf166-AS1Q96NR2 134 aa10.27□□□□□ -0.77
AMIGO1-202ENST00000369864 MXRA5Q9NR99 2828 aa10.19□□□□□ -0.78
AMIGO1-202ENST00000369864 C10orf95Q9H7T3 257 aa10.14□□□□□ -0.79
AMIGO1-202ENST00000369864 H0YAA0 97 aa10.12□□□□□ -0.79
AMIGO1-202ENST00000369864 RELNP78509 3460 aa10.12□□□□□ -0.79
AMIGO1-202ENST00000369864 WDFY3Q8IZQ1 3526 aa10.11□□□□□ -0.79
AMIGO1-202ENST00000369864 TENM3Q9P273 2699 aa10.1□□□□□ -0.79
AMIGO1-202ENST00000369864 DCHS1Q96JQ0 3298 aa10.08□□□□□ -0.8
AMIGO1-202ENST00000369864 CELSR1Q9NYQ6 3014 aa10.03□□□□□ -0.8
AMIGO1-202ENST00000369864 TNP1P09430 55 aa10.02□□□□□ -0.81
AMIGO1-202ENST00000369864 TENM1Q9UKZ4 2725 aa9.98□□□□□ -0.81
AMIGO1-202ENST00000369864 P0C880 135 aa9.96□□□□□ -0.82
AMIGO1-202ENST00000369864 PP632Q6XCG6 107 aa9.92□□□□□ -0.82
AMIGO1-202ENST00000369864 ASPMQ8IZT6 3477 aa9.9□□□□□ -0.82
AMIGO1-202ENST00000369864 ZFHX4Q86UP3 3567 aa9.87□□□□□ -0.83
AMIGO1-202ENST00000369864 LAMA5O15230 3695 aa9.86□□□□□ -0.83
AMIGO1-202ENST00000369864 KRTAP1-4P0C5Y4 121 aa9.82□□□□□ -0.84
AMIGO1-202ENST00000369864 PKD1L1Q8TDX9 2849 aa9.81□□□□□ -0.84
AMIGO1-202ENST00000369864 PDZD2O15018 2839 aa9.79□□□□□ -0.84
AMIGO1-202ENST00000369864 KRTAP10-8P60410 259 aa9.76□□□□□ -0.85
AMIGO1-202ENST00000369864 TGP01266 2768 aa9.73□□□□□ -0.85
AMIGO1-202ENST00000369864 TENM2Q9NT68 2774 aa9.72□□□□□ -0.85
AMIGO1-202ENST00000369864 MUC3AQ02505 3323 aa9.72□□□□□ -0.85
AMIGO1-202ENST00000369864 KRTAP13-3Q3SY46 172 aa9.68□□□□□ -0.86
AMIGO1-202ENST00000369864 XP32Q5T750 250 aa9.67□□□□□ -0.86
AMIGO1-202ENST00000369864 FBN1P35555 2871 aaKnown RBP9.66□□□□□ -0.86
AMIGO1-202ENST00000369864 CSMD1Q96PZ7 3565 aa9.64□□□□□ -0.87
AMIGO1-202ENST00000369864 VWFP04275 2813 aa9.64□□□□□ -0.87
AMIGO1-202ENST00000369864 DMDP11532 3685 aa9.59□□□□□ -0.88
AMIGO1-202ENST00000369864 SMG1Q96Q15 3661 aaKnown RBP9.53□□□□□ -0.88
AMIGO1-202ENST00000369864 KRTAP21-3Q3LHN1 58 aa9.52□□□□□ -0.88
AMIGO1-202ENST00000369864 OTOGQ6ZRI0 2925 aa9.45□□□□□ -0.9
AMIGO1-202ENST00000369864 CUBNO60494 3623 aa9.41□□□□□ -0.9
AMIGO1-202ENST00000369864 A0A1B0GVY2 172 aa9.39□□□□□ -0.91
AMIGO1-202ENST00000369864 KRTAP12-2P59991 146 aa9.39□□□□□ -0.91
AMIGO1-202ENST00000369864 SVEP1Q4LDE5 3571 aa9.39□□□□□ -0.91
AMIGO1-202ENST00000369864 TPRXLQ17RH7 258 aa9.38□□□□□ -0.91
AMIGO1-202ENST00000369864 NBPF19A0A087WUL8 3843 aa9.34□□□□□ -0.91
AMIGO1-202ENST00000369864 SRRM2Q9UQ35 2752 aaKnown RBP9.33□□□□□ -0.92
AMIGO1-202ENST00000369864 ZFHX3Q15911 3703 aa9.3□□□□□ -0.92
AMIGO1-202ENST00000369864 KRTAP12-1P59990 96 aa9.23□□□□□ -0.93
AMIGO1-202ENST00000369864 FBN3Q75N90 2809 aa9.22□□□□□ -0.93
AMIGO1-202ENST00000369864 CSMD2Q7Z408 3487 aa9.18□□□□□ -0.94
AMIGO1-202ENST00000369864 KRTAP3-1Q9BYR8 98 aa9.16□□□□□ -0.94
AMIGO1-202ENST00000369864 KRTAP13-4Q3LI77 160 aa9.15□□□□□ -0.95
AMIGO1-202ENST00000369864 KRTAP10-10P60014 251 aa9.11□□□□□ -0.95
AMIGO1-202ENST00000369864 SPENQ96T58 3664 aaKnown RBP9.06□□□□□ -0.96
AMIGO1-202ENST00000369864 MEGF8Q7Z7M0 2845 aa9.01□□□□□ -0.97
AMIGO1-202ENST00000369864 PRO2289Q9P1D8 64 aa9.01□□□□□ -0.97
AMIGO1-202ENST00000369864 COL7A1Q02388 2944 aa8.99□□□□□ -0.97
AMIGO1-202ENST00000369864 KRTAP10-6P60371 365 aaPredicted RBP8.98□□□□□ -0.97
AMIGO1-202ENST00000369864 TRRAPQ9Y4A5 3859 aa8.96□□□□□ -0.98
AMIGO1-202ENST00000369864 ANK3Q12955 4377 aaKnown RBP8.9□□□□□ -0.98
AMIGO1-202ENST00000369864 KRTAP15-1Q3LI76 137 aa8.89□□□□□ -0.99
AMIGO1-202ENST00000369864 BSNQ9UPA5 3926 aa8.86□□□□□ -0.99
AMIGO1-202ENST00000369864 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
AMIGO1-202ENST00000369864 INE1O15225 51 aa8.59□□□□□ -1.03
AMIGO1-202ENST00000369864 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
AMIGO1-202ENST00000369864 VPS13CQ709C8 3753 aa8.52□□□□□ -1.05
AMIGO1-202ENST00000369864 MT1HL1P0DM35 61 aa8.36□□□□□ -1.07
AMIGO1-202ENST00000369864 HUWE1Q7Z6Z7 4374 aaKnown RBP8.34□□□□□ -1.07
AMIGO1-202ENST00000369864 CSMD3Q7Z407 3707 aa8.29□□□□□ -1.08
AMIGO1-202ENST00000369864 KRTAP10-4P60372 401 aaPredicted RBP8.28□□□□□ -1.08
AMIGO1-202ENST00000369864 ZNF469Q96JG9 3925 aaPredicted RBP8.2□□□□□ -1.1
AMIGO1-202ENST00000369864 KRTAP10-12P60413 245 aa8.14□□□□□ -1.11
AMIGO1-202ENST00000369864 KRTAP23-1A1A580 65 aa8.12□□□□□ -1.11
AMIGO1-202ENST00000369864 KRTAP12-3P60328 96 aa8.05□□□□□ -1.12
AMIGO1-202ENST00000369864 KRTAP4-5Q9BYR2 181 aa8.04□□□□□ -1.12
AMIGO1-202ENST00000369864 AKAP9Q99996 3911 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms