RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 RANBP2P49792 3224 aaKnown RBP4.42□□□□□ -1.7
VANGL1-204ENST00000369510 WDFY4Q6ZS81 3184 aa4.4□□□□□ -1.7
VANGL1-204ENST00000369510 LAMA2P24043 3122 aaKnown RBP4.38□□□□□ -1.71
VANGL1-204ENST00000369510 UNC80Q8N2C7 3258 aa4.37□□□□□ -1.71
VANGL1-204ENST00000369510 FLNCQ14315 2725 aa4.37□□□□□ -1.71
VANGL1-204ENST00000369510 DNAH14Q0VDD8 3507 aa4.37□□□□□ -1.71
VANGL1-204ENST00000369510 HIVEP1P15822 2718 aa4.36□□□□□ -1.71
VANGL1-204ENST00000369510 CRYBG3Q68DQ2 2970 aa4.36□□□□□ -1.71
VANGL1-204ENST00000369510 TRIOO75962 3097 aa4.35□□□□□ -1.71
VANGL1-204ENST00000369510 LRBAP50851 2863 aa4.35□□□□□ -1.71
VANGL1-204ENST00000369510 REV3LO60673 3130 aa4.34□□□□□ -1.72
VANGL1-204ENST00000369510 VPS13AQ96RL7 3174 aa4.33□□□□□ -1.72
VANGL1-204ENST00000369510 TENM4Q6N022 2769 aa4.33□□□□□ -1.72
VANGL1-204ENST00000369510 LAMA3Q16787 3333 aa4.33□□□□□ -1.72
VANGL1-204ENST00000369510 KALRNO60229 2985 aa4.32□□□□□ -1.72
VANGL1-204ENST00000369510 TENM1Q9UKZ4 2725 aa4.32□□□□□ -1.72
VANGL1-204ENST00000369510 XIRP2A4UGR9 3374 aa4.32□□□□□ -1.72
VANGL1-204ENST00000369510 SZT2Q5T011 3432 aa4.32□□□□□ -1.72
VANGL1-204ENST00000369510 FRYLO94915 3013 aa4.32□□□□□ -1.72
VANGL1-204ENST00000369510 NIPBLQ6KC79 2804 aaeCLIP4.3□□□□□ -1.72
VANGL1-204ENST00000369510 A0A1B0GVY2 172 aa4.29□□□□□ -1.72
VANGL1-204ENST00000369510 CELSR2Q9HCU4 2923 aa4.29□□□□□ -1.72
VANGL1-204ENST00000369510 CDH23Q9H251 3354 aa4.28□□□□□ -1.72
VANGL1-204ENST00000369510 TGP01266 2768 aa4.27□□□□□ -1.73
VANGL1-204ENST00000369510 CELSR3Q9NYQ7 3312 aa4.27□□□□□ -1.73
VANGL1-204ENST00000369510 NF1P21359 2839 aa4.27□□□□□ -1.73
VANGL1-204ENST00000369510 VCANP13611 3396 aa4.26□□□□□ -1.73
VANGL1-204ENST00000369510 COL6A3P12111 3177 aa4.26□□□□□ -1.73
VANGL1-204ENST00000369510 KRTAP1-4P0C5Y4 121 aa4.25□□□□□ -1.73
VANGL1-204ENST00000369510 TACC2O95359 2948 aa4.24□□□□□ -1.73
VANGL1-204ENST00000369510 ASH1LQ9NR48 2969 aaKnown RBP4.22□□□□□ -1.73
VANGL1-204ENST00000369510 DMXL2Q8TDJ6 3036 aa4.21□□□□□ -1.74
VANGL1-204ENST00000369510 KRTAP10-6P60371 365 aaPredicted RBP4.21□□□□□ -1.74
VANGL1-204ENST00000369510 USP34Q70CQ2 3546 aa4.21□□□□□ -1.74
VANGL1-204ENST00000369510 COL12A1Q99715 3063 aa4.21□□□□□ -1.74
VANGL1-204ENST00000369510 SPTBN5Q9NRC6 3674 aaKnown RBP4.2□□□□□ -1.74
VANGL1-204ENST00000369510 KRTAP13-3Q3SY46 172 aa4.2□□□□□ -1.74
VANGL1-204ENST00000369510 KRTAP12-1P59990 96 aa4.19□□□□□ -1.74
VANGL1-204ENST00000369510 PDZD2O15018 2839 aa4.18□□□□□ -1.74
VANGL1-204ENST00000369510 ATMQ13315 3056 aa4.18□□□□□ -1.74
VANGL1-204ENST00000369510 ZZEF1O43149 2961 aa4.18□□□□□ -1.74
VANGL1-204ENST00000369510 LAMA1P25391 3075 aa4.18□□□□□ -1.74
VANGL1-204ENST00000369510 NBEAQ8NFP9 2946 aa4.17□□□□□ -1.74
VANGL1-204ENST00000369510 DCHS2Q6V1P9 2916 aa4.15□□□□□ -1.74
VANGL1-204ENST00000369510 SPEGQ15772 3267 aa4.15□□□□□ -1.75
VANGL1-204ENST00000369510 SRRM2Q9UQ35 2752 aaKnown RBP4.13□□□□□ -1.75
VANGL1-204ENST00000369510 WDFY3Q8IZQ1 3526 aa4.13□□□□□ -1.75
VANGL1-204ENST00000369510 FREM2Q5SZK8 3169 aa4.13□□□□□ -1.75
VANGL1-204ENST00000369510 MYO15AQ9UKN7 3530 aa4.13□□□□□ -1.75
VANGL1-204ENST00000369510 TENM2Q9NT68 2774 aa4.1□□□□□ -1.75
VANGL1-204ENST00000369510 EYSQ5T1H1 3165 aa4.1□□□□□ -1.75
VANGL1-204ENST00000369510 SPENQ96T58 3664 aaKnown RBP4.1□□□□□ -1.75
VANGL1-204ENST00000369510 BOD1L1Q8NFC6 3051 aa4.09□□□□□ -1.75
VANGL1-204ENST00000369510 ADGRG4Q8IZF6 3080 aa4.09□□□□□ -1.76
VANGL1-204ENST00000369510 TNRC18O15417 2968 aaPredicted RBP4.08□□□□□ -1.76
VANGL1-204ENST00000369510 DCHS1Q96JQ0 3298 aa4.08□□□□□ -1.76
VANGL1-204ENST00000369510 KRTAP10-12P60413 245 aa4.08□□□□□ -1.76
VANGL1-204ENST00000369510 ZANQ9Y493 2812 aa4.07□□□□□ -1.76
VANGL1-204ENST00000369510 MT3P25713 68 aa4.04□□□□□ -1.76
VANGL1-204ENST00000369510 CELSR1Q9NYQ6 3014 aa4.01□□□□□ -1.77
VANGL1-204ENST00000369510 HRNRQ86YZ3 2850 aaPredicted RBP4.01□□□□□ -1.77
VANGL1-204ENST00000369510 MXRA5Q9NR99 2828 aa4□□□□□ -1.77
VANGL1-204ENST00000369510 CFAP47Q6ZTR5 3102 aa3.99□□□□□ -1.77
VANGL1-204ENST00000369510 DMDP11532 3685 aa3.98□□□□□ -1.77
VANGL1-204ENST00000369510 PKD1L1Q8TDX9 2849 aa3.98□□□□□ -1.77
VANGL1-204ENST00000369510 FBN2P35556 2912 aa3.98□□□□□ -1.77
VANGL1-204ENST00000369510 KRTAP19-4Q3LI73 84 aa3.97□□□□□ -1.77
VANGL1-204ENST00000369510 KRTAP3-1Q9BYR8 98 aa3.96□□□□□ -1.78
VANGL1-204ENST00000369510 VWFP04275 2813 aa3.95□□□□□ -1.78
VANGL1-204ENST00000369510 KRTAP12-3P60328 96 aa3.94□□□□□ -1.78
VANGL1-204ENST00000369510 DMXL1Q9Y485 3027 aa3.92□□□□□ -1.78
VANGL1-204ENST00000369510 CRCT1Q9UGL9 99 aa3.89□□□□□ -1.79
VANGL1-204ENST00000369510 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
VANGL1-204ENST00000369510 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
VANGL1-204ENST00000369510 MUC3AQ02505 3323 aa3.87□□□□□ -1.79
VANGL1-204ENST00000369510 ANK3Q12955 4377 aaKnown RBP3.87□□□□□ -1.79
VANGL1-204ENST00000369510 CSMD1Q96PZ7 3565 aa3.86□□□□□ -1.79
VANGL1-204ENST00000369510 ZFHX4Q86UP3 3567 aa3.85□□□□□ -1.79
VANGL1-204ENST00000369510 RELNP78509 3460 aa3.85□□□□□ -1.79
VANGL1-204ENST00000369510 NBPF19A0A087WUL8 3843 aa3.83□□□□□ -1.8
VANGL1-204ENST00000369510 SMG1Q96Q15 3661 aaKnown RBP3.82□□□□□ -1.8
VANGL1-204ENST00000369510 ASPMQ8IZT6 3477 aa3.81□□□□□ -1.8
VANGL1-204ENST00000369510 COL7A1Q02388 2944 aa3.78□□□□□ -1.8
VANGL1-204ENST00000369510 LOC400499M0QZD8 3231 aa3.74□□□□□ -1.81
VANGL1-204ENST00000369510 HUWE1Q7Z6Z7 4374 aaKnown RBP3.7□□□□□ -1.82
VANGL1-204ENST00000369510 BSNQ9UPA5 3926 aa3.69□□□□□ -1.82
VANGL1-204ENST00000369510 KRTAP3-2Q9BYR7 98 aa3.69□□□□□ -1.82
VANGL1-204ENST00000369510 ZFHX3Q15911 3703 aa3.69□□□□□ -1.82
VANGL1-204ENST00000369510 KRTAP3-3Q9BYR6 98 aa3.69□□□□□ -1.82
VANGL1-204ENST00000369510 MEGF8Q7Z7M0 2845 aa3.68□□□□□ -1.82
VANGL1-204ENST00000369510 FBN3Q75N90 2809 aa3.66□□□□□ -1.82
VANGL1-204ENST00000369510 FBN1P35555 2871 aaKnown RBP3.66□□□□□ -1.82
VANGL1-204ENST00000369510 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.82
VANGL1-204ENST00000369510 OTOGQ6ZRI0 2925 aa3.64□□□□□ -1.83
VANGL1-204ENST00000369510 MT1HL1P0DM35 61 aa3.64□□□□□ -1.83
VANGL1-204ENST00000369510 LAMA5O15230 3695 aa3.63□□□□□ -1.83
VANGL1-204ENST00000369510 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
VANGL1-204ENST00000369510 SVEP1Q4LDE5 3571 aa3.59□□□□□ -1.84
VANGL1-204ENST00000369510 LORP23490 312 aaPredicted RBP3.57□□□□□ -1.84
VANGL1-204ENST00000369510 ALMS1Q8TCU4 4167 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms