RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 R4GN34 69 aa6.32□□□□□ -1.4
PTPRK-205ENST00000368213 FBN2P35556 2912 aa6.31□□□□□ -1.4
PTPRK-205ENST00000368213 OCR1Q9BZK8 76 aa6.3□□□□□ -1.4
PTPRK-205ENST00000368213 TENM4Q6N022 2769 aa6.3□□□□□ -1.4
PTPRK-205ENST00000368213 H7BZZ5 65 aa6.3□□□□□ -1.4
PTPRK-205ENST00000368213 A0A1B0GU33 70 aa6.29□□□□□ -1.4
PTPRK-205ENST00000368213 HRNRQ86YZ3 2850 aaPredicted RBP6.28□□□□□ -1.4
PTPRK-205ENST00000368213 NBPF19A0A087WUL8 3843 aa6.25□□□□□ -1.41
PTPRK-205ENST00000368213 ZFHX4Q86UP3 3567 aa6.24□□□□□ -1.41
PTPRK-205ENST00000368213 KRTAP4-16G5E9R7 235 aaPredicted RBP6.24□□□□□ -1.41
PTPRK-205ENST00000368213 DMBT1Q9UGM3 2413 aaPredicted RBP6.23□□□□□ -1.41
PTPRK-205ENST00000368213 RPS29P62273 56 aaKnown RBP6.22□□□□□ -1.41
PTPRK-205ENST00000368213 KRTAP11-1Q8IUC1 163 aa6.21□□□□□ -1.42
PTPRK-205ENST00000368213 PLAC4Q8WY50 150 aa6.2□□□□□ -1.42
PTPRK-205ENST00000368213 FLG2Q5D862 2391 aaPredicted RBP6.19□□□□□ -1.42
PTPRK-205ENST00000368213 M0QZ58 72 aa6.19□□□□□ -1.42
PTPRK-205ENST00000368213 DMAC1Q96GE9 116 aa6.19□□□□□ -1.42
PTPRK-205ENST00000368213 MXRA5Q9NR99 2828 aa6.18□□□□□ -1.42
PTPRK-205ENST00000368213 Q1T7F1 81 aa6.17□□□□□ -1.42
PTPRK-205ENST00000368213 KRTAP13-2Q52LG2 175 aa6.15□□□□□ -1.43
PTPRK-205ENST00000368213 SMG1Q96Q15 3661 aaKnown RBP6.14□□□□□ -1.43
PTPRK-205ENST00000368213 ADM2Q7Z4H4 148 aa6.12□□□□□ -1.43
PTPRK-205ENST00000368213 ZFHX3Q15911 3703 aa6.11□□□□□ -1.43
PTPRK-205ENST00000368213 ASB16-AS1Q495Z4 193 aa6.11□□□□□ -1.43
PTPRK-205ENST00000368213 H1FX-AS1Q4G0G2 97 aa6.11□□□□□ -1.43
PTPRK-205ENST00000368213 KRTAP7-1Q8IUC3 87 aa6.1□□□□□ -1.43
PTPRK-205ENST00000368213 Q75L30 129 aa6.1□□□□□ -1.43
PTPRK-205ENST00000368213 RPL37P61927 97 aaKnown RBP6.1□□□□□ -1.43
PTPRK-205ENST00000368213 C20orf166-AS1Q96NR2 134 aa6.08□□□□□ -1.44
PTPRK-205ENST00000368213 KRTAP13-1Q8IUC0 172 aa6.06□□□□□ -1.44
PTPRK-205ENST00000368213 NOTCH2NLQ7Z3S9 236 aa6.06□□□□□ -1.44
PTPRK-205ENST00000368213 KRTAP16-1A8MUX0 517 aa6.04□□□□□ -1.44
PTPRK-205ENST00000368213 CELSR1Q9NYQ6 3014 aa6.03□□□□□ -1.44
PTPRK-205ENST00000368213 LINC01558Q9Y6Z2 57 aa6.03□□□□□ -1.44
PTPRK-205ENST00000368213 Q5XG85 94 aa6.03□□□□□ -1.44
PTPRK-205ENST00000368213 OTOGQ6ZRI0 2925 aa6.01□□□□□ -1.45
PTPRK-205ENST00000368213 KRTAP29-1A8MX34 341 aaPredicted RBP5.98□□□□□ -1.45
PTPRK-205ENST00000368213 FBN1P35555 2871 aaKnown RBP5.98□□□□□ -1.45
PTPRK-205ENST00000368213 CSMD2Q7Z408 3487 aa5.97□□□□□ -1.45
PTPRK-205ENST00000368213 CSMD1Q96PZ7 3565 aa5.97□□□□□ -1.45
PTPRK-205ENST00000368213 A8MUU9 505 aa5.96□□□□□ -1.45
PTPRK-205ENST00000368213 TENM1Q9UKZ4 2725 aa5.96□□□□□ -1.46
PTPRK-205ENST00000368213 PKD1L1Q8TDX9 2849 aa5.96□□□□□ -1.46
PTPRK-205ENST00000368213 TENM2Q9NT68 2774 aa5.95□□□□□ -1.46
PTPRK-205ENST00000368213 CUBNO60494 3623 aa5.91□□□□□ -1.46
PTPRK-205ENST00000368213 SPATA8Q6RVD6 105 aa5.91□□□□□ -1.46
PTPRK-205ENST00000368213 NDUFAF8A1L188 74 aa5.9□□□□□ -1.47
PTPRK-205ENST00000368213 PDZD2O15018 2839 aa5.89□□□□□ -1.47
PTPRK-205ENST00000368213 KRTAP1-4P0C5Y4 121 aa5.89□□□□□ -1.47
PTPRK-205ENST00000368213 SVEP1Q4LDE5 3571 aa5.89□□□□□ -1.47
PTPRK-205ENST00000368213 XP32Q5T750 250 aa5.88□□□□□ -1.47
PTPRK-205ENST00000368213 TENM3Q9P273 2699 aa5.88□□□□□ -1.47
PTPRK-205ENST00000368213 VWFP04275 2813 aa5.87□□□□□ -1.47
PTPRK-205ENST00000368213 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
PTPRK-205ENST00000368213 ROMO1P60602 79 aa5.85□□□□□ -1.47
PTPRK-205ENST00000368213 A0A1B0GVY2 172 aa5.85□□□□□ -1.47
PTPRK-205ENST00000368213 CYSTM1Q9H1C7 97 aa5.83□□□□□ -1.48
PTPRK-205ENST00000368213 Q5VV11 94 aa5.82□□□□□ -1.48
PTPRK-205ENST00000368213 SPENQ96T58 3664 aaKnown RBP5.82□□□□□ -1.48
PTPRK-205ENST00000368213 TGP01266 2768 aa5.77□□□□□ -1.49
PTPRK-205ENST00000368213 KRTAP10-10P60014 251 aa5.75□□□□□ -1.49
PTPRK-205ENST00000368213 PRAC1Q96KF2 57 aa5.72□□□□□ -1.49
PTPRK-205ENST00000368213 KRTAP13-3Q3SY46 172 aa5.71□□□□□ -1.5
PTPRK-205ENST00000368213 A8MU10 97 aa5.69□□□□□ -1.5
PTPRK-205ENST00000368213 KRTAP10-8P60410 259 aa5.69□□□□□ -1.5
PTPRK-205ENST00000368213 TNP1P09430 55 aa5.68□□□□□ -1.5
PTPRK-205ENST00000368213 SRRM2Q9UQ35 2752 aaKnown RBP5.64□□□□□ -1.51
PTPRK-205ENST00000368213 BSNQ9UPA5 3926 aa5.63□□□□□ -1.51
PTPRK-205ENST00000368213 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.52
PTPRK-205ENST00000368213 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
PTPRK-205ENST00000368213 TRRAPQ9Y4A5 3859 aa5.53□□□□□ -1.52
PTPRK-205ENST00000368213 ANK3Q12955 4377 aaKnown RBP5.49□□□□□ -1.53
PTPRK-205ENST00000368213 P0C880 135 aa5.47□□□□□ -1.53
PTPRK-205ENST00000368213 VPS13CQ709C8 3753 aa5.42□□□□□ -1.54
PTPRK-205ENST00000368213 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.55
PTPRK-205ENST00000368213 FBN3Q75N90 2809 aa5.38□□□□□ -1.55
PTPRK-205ENST00000368213 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
PTPRK-205ENST00000368213 COL7A1Q02388 2944 aa5.37□□□□□ -1.55
PTPRK-205ENST00000368213 ZNF469Q96JG9 3925 aaPredicted RBP5.33□□□□□ -1.56
PTPRK-205ENST00000368213 KRTAP4-5Q9BYR2 181 aa5.32□□□□□ -1.56
PTPRK-205ENST00000368213 A6NN06 94 aa5.27□□□□□ -1.57
PTPRK-205ENST00000368213 MT1HL1P0DM35 61 aa5.26□□□□□ -1.57
PTPRK-205ENST00000368213 H0YAA0 97 aa5.25□□□□□ -1.57
PTPRK-205ENST00000368213 CSMD3Q7Z407 3707 aa5.24□□□□□ -1.57
PTPRK-205ENST00000368213 MEGF8Q7Z7M0 2845 aa5.21□□□□□ -1.58
PTPRK-205ENST00000368213 AKAP9Q99996 3911 aa5.14□□□□□ -1.59
PTPRK-205ENST00000368213 HUWE1Q7Z6Z7 4374 aaKnown RBP5.12□□□□□ -1.59
PTPRK-205ENST00000368213 KRTAP10-4P60372 401 aaPredicted RBP5.06□□□□□ -1.6
PTPRK-205ENST00000368213 ALMS1Q8TCU4 4167 aa5.05□□□□□ -1.6
PTPRK-205ENST00000368213 KRTAP12-2P59991 146 aa5.04□□□□□ -1.6
PTPRK-205ENST00000368213 KRTAP3-1Q9BYR8 98 aa5.03□□□□□ -1.6
PTPRK-205ENST00000368213 DNHD1Q96M86 4753 aa5.02□□□□□ -1.61
PTPRK-205ENST00000368213 KRTAP13-4Q3LI77 160 aa5□□□□□ -1.61
PTPRK-205ENST00000368213 KRTAP12-1P59990 96 aa4.96□□□□□ -1.62
PTPRK-205ENST00000368213 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
PTPRK-205ENST00000368213 DNAH9Q9NYC9 4486 aa4.86□□□□□ -1.63
PTPRK-205ENST00000368213 CRCT1Q9UGL9 99 aa4.83□□□□□ -1.64
PTPRK-205ENST00000368213 KRTAP10-6P60371 365 aaPredicted RBP4.82□□□□□ -1.64
PTPRK-205ENST00000368213 INE1O15225 51 aa4.8□□□□□ -1.64
PTPRK-205ENST00000368213 KRTAP10-12P60413 245 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms