RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 CSMD1Q96PZ7 3565 aa6.88□□□□□ -1.31
COPA-202ENST00000368069 RBM12B-AS1Q9P1G2 102 aa6.85□□□□□ -1.31
COPA-202ENST00000368069 A0A0D9SG42 100 aa6.84□□□□□ -1.31
COPA-202ENST00000368069 DMAC1Q96GE9 116 aa6.84□□□□□ -1.31
COPA-202ENST00000368069 SPINT4Q6UDR6 99 aa6.84□□□□□ -1.31
COPA-202ENST00000368069 KRTAP13-1Q8IUC0 172 aa6.83□□□□□ -1.32
COPA-202ENST00000368069 A0A1B0GU33 70 aa6.83□□□□□ -1.32
COPA-202ENST00000368069 PRAC1Q96KF2 57 aa6.8□□□□□ -1.32
COPA-202ENST00000368069 J3QL48 77 aa6.78□□□□□ -1.32
COPA-202ENST00000368069 CELSR1Q9NYQ6 3014 aa6.78□□□□□ -1.32
COPA-202ENST00000368069 CRIPTQ9P021 101 aa6.77□□□□□ -1.32
COPA-202ENST00000368069 TENM3Q9P273 2699 aa6.74□□□□□ -1.33
COPA-202ENST00000368069 ASB16-AS1Q495Z4 193 aa6.73□□□□□ -1.33
COPA-202ENST00000368069 TENM4Q6N022 2769 aa6.72□□□□□ -1.33
COPA-202ENST00000368069 DMBT1Q9UGM3 2413 aaPredicted RBP6.72□□□□□ -1.33
COPA-202ENST00000368069 SVEP1Q4LDE5 3571 aa6.72□□□□□ -1.33
COPA-202ENST00000368069 COX6B2Q6YFQ2 88 aa6.71□□□□□ -1.33
COPA-202ENST00000368069 LINC01554Q52M75 96 aa6.71□□□□□ -1.34
COPA-202ENST00000368069 KRTAP13-2Q52LG2 175 aa6.69□□□□□ -1.34
COPA-202ENST00000368069 Q6ZSA8 131 aa6.69□□□□□ -1.34
COPA-202ENST00000368069 TENM1Q9UKZ4 2725 aa6.67□□□□□ -1.34
COPA-202ENST00000368069 A8MU10 97 aa6.66□□□□□ -1.34
COPA-202ENST00000368069 CSAG1Q6PB30 78 aa6.66□□□□□ -1.34
COPA-202ENST00000368069 S4R3F8 94 aa6.65□□□□□ -1.35
COPA-202ENST00000368069 PDZD2O15018 2839 aa6.64□□□□□ -1.35
COPA-202ENST00000368069 SPENQ96T58 3664 aaKnown RBP6.62□□□□□ -1.35
COPA-202ENST00000368069 Q5VSD8 79 aa6.61□□□□□ -1.35
COPA-202ENST00000368069 VWFP04275 2813 aa6.6□□□□□ -1.35
COPA-202ENST00000368069 H1FX-AS1Q4G0G2 97 aa6.6□□□□□ -1.35
COPA-202ENST00000368069 SPATA8Q6RVD6 105 aa6.6□□□□□ -1.35
COPA-202ENST00000368069 A6NN06 94 aa6.59□□□□□ -1.35
COPA-202ENST00000368069 RPS29P62273 56 aaKnown RBP6.56□□□□□ -1.36
COPA-202ENST00000368069 BSNQ9UPA5 3926 aa6.55□□□□□ -1.36
COPA-202ENST00000368069 NBPF19A0A087WUL8 3843 aa6.52□□□□□ -1.36
COPA-202ENST00000368069 RPL37P61927 97 aaKnown RBP6.52□□□□□ -1.37
COPA-202ENST00000368069 FLG2Q5D862 2391 aaPredicted RBP6.52□□□□□ -1.37
COPA-202ENST00000368069 CUBNO60494 3623 aa6.5□□□□□ -1.37
COPA-202ENST00000368069 OTOGQ6ZRI0 2925 aa6.48□□□□□ -1.37
COPA-202ENST00000368069 FBN1P35555 2871 aaKnown RBP6.48□□□□□ -1.37
COPA-202ENST00000368069 ROMO1P60602 79 aa6.47□□□□□ -1.37
COPA-202ENST00000368069 ADM2Q7Z4H4 148 aa6.45□□□□□ -1.38
COPA-202ENST00000368069 CAMK2N1Q7Z7J9 78 aa6.45□□□□□ -1.38
COPA-202ENST00000368069 KRTAP1-4P0C5Y4 121 aa6.44□□□□□ -1.38
COPA-202ENST00000368069 R4GN34 69 aa6.43□□□□□ -1.38
COPA-202ENST00000368069 ANK3Q12955 4377 aaKnown RBP6.42□□□□□ -1.38
COPA-202ENST00000368069 CSMD2Q7Z408 3487 aa6.41□□□□□ -1.38
COPA-202ENST00000368069 SEC61BP60468 96 aaKnown RBP6.4□□□□□ -1.39
COPA-202ENST00000368069 A8MUU9 505 aa6.39□□□□□ -1.39
COPA-202ENST00000368069 PKD1L1Q8TDX9 2849 aa6.38□□□□□ -1.39
COPA-202ENST00000368069 C20orf166-AS1Q96NR2 134 aa6.37□□□□□ -1.39
COPA-202ENST00000368069 M0QZ58 72 aa6.37□□□□□ -1.39
COPA-202ENST00000368069 TGP01266 2768 aa6.36□□□□□ -1.39
COPA-202ENST00000368069 H3BS24 57 aa6.35□□□□□ -1.39
COPA-202ENST00000368069 TENM2Q9NT68 2774 aa6.35□□□□□ -1.39
COPA-202ENST00000368069 KRTAP16-1A8MUX0 517 aa6.34□□□□□ -1.39
COPA-202ENST00000368069 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
COPA-202ENST00000368069 ZFHX3Q15911 3703 aa6.32□□□□□ -1.4
COPA-202ENST00000368069 LUZP6Q538Z0 58 aa6.31□□□□□ -1.4
COPA-202ENST00000368069 TRRAPQ9Y4A5 3859 aa6.28□□□□□ -1.4
COPA-202ENST00000368069 M0R2T5 61 aa6.28□□□□□ -1.4
COPA-202ENST00000368069 KRTAP13-3Q3SY46 172 aa6.27□□□□□ -1.41
COPA-202ENST00000368069 KRTAP21-3Q3LHN1 58 aa6.25□□□□□ -1.41
COPA-202ENST00000368069 VPS13CQ709C8 3753 aa6.2□□□□□ -1.42
COPA-202ENST00000368069 H0YAA0 97 aa6.19□□□□□ -1.42
COPA-202ENST00000368069 XP32Q5T750 250 aa6.17□□□□□ -1.42
COPA-202ENST00000368069 SRRM2Q9UQ35 2752 aaKnown RBP6.12□□□□□ -1.43
COPA-202ENST00000368069 FBN3Q75N90 2809 aa6.12□□□□□ -1.43
COPA-202ENST00000368069 MEGF8Q7Z7M0 2845 aa6.04□□□□□ -1.44
COPA-202ENST00000368069 A0A1B0GVY2 172 aa6.02□□□□□ -1.45
COPA-202ENST00000368069 ZNF469Q96JG9 3925 aaPredicted RBP6.02□□□□□ -1.45
COPA-202ENST00000368069 C10orf95Q9H7T3 257 aa6.02□□□□□ -1.45
COPA-202ENST00000368069 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
COPA-202ENST00000368069 A0A0A0MQY5 61 aa5.99□□□□□ -1.45
COPA-202ENST00000368069 P0C880 135 aa5.99□□□□□ -1.45
COPA-202ENST00000368069 AKAP9Q99996 3911 aa5.98□□□□□ -1.45
COPA-202ENST00000368069 NDUFAF8A1L188 74 aa5.98□□□□□ -1.45
COPA-202ENST00000368069 HUWE1Q7Z6Z7 4374 aaKnown RBP5.97□□□□□ -1.45
COPA-202ENST00000368069 TPRXLQ17RH7 258 aa5.96□□□□□ -1.46
COPA-202ENST00000368069 KRTAP10-8P60410 259 aa5.96□□□□□ -1.46
COPA-202ENST00000368069 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
COPA-202ENST00000368069 COL7A1Q02388 2944 aa5.85□□□□□ -1.47
COPA-202ENST00000368069 TNP1P09430 55 aa5.85□□□□□ -1.47
COPA-202ENST00000368069 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
COPA-202ENST00000368069 CSMD3Q7Z407 3707 aa5.78□□□□□ -1.48
COPA-202ENST00000368069 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
COPA-202ENST00000368069 DNAH9Q9NYC9 4486 aa5.73□□□□□ -1.49
COPA-202ENST00000368069 KRTAP10-6P60371 365 aaPredicted RBP5.7□□□□□ -1.5
COPA-202ENST00000368069 KRTAP13-4Q3LI77 160 aa5.7□□□□□ -1.5
COPA-202ENST00000368069 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
COPA-202ENST00000368069 PLECQ15149 4684 aaKnown RBP5.64□□□□□ -1.51
COPA-202ENST00000368069 KRTAP10-4P60372 401 aaPredicted RBP5.63□□□□□ -1.51
COPA-202ENST00000368069 DNAH1Q9P2D7 4330 aa5.62□□□□□ -1.51
COPA-202ENST00000368069 DNAH10Q8IVF4 4471 aa5.61□□□□□ -1.51
COPA-202ENST00000368069 KRTAP3-3Q9BYR6 98 aa5.58□□□□□ -1.52
COPA-202ENST00000368069 KRTAP10-10P60014 251 aa5.57□□□□□ -1.52
COPA-202ENST00000368069 MT1HL1P0DM35 61 aa5.57□□□□□ -1.52
COPA-202ENST00000368069 KRTAP3-2Q9BYR7 98 aa5.56□□□□□ -1.52
COPA-202ENST00000368069 ALMS1Q8TCU4 4167 aa5.53□□□□□ -1.52
COPA-202ENST00000368069 DNAH11Q96DT5 4516 aa5.53□□□□□ -1.52
COPA-202ENST00000368069 VPS13DQ5THJ4 4388 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms