RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 SMIM27A0A1W2PRY6 76 aa0.17□□□□□ -2.38
RNU6-271P-201ENST00000363858 H3BNG1 76 aa0.17□□□□□ -2.38
RNU6-271P-201ENST00000363858 ANKRD11Q6UB99 2663 aaPredicted RBP0.17□□□□□ -2.38
RNU6-271P-201ENST00000363858 UTP20O75691 2785 aaKnown RBP0.17□□□□□ -2.38
RNU6-271P-201ENST00000363858 KIF21BO75037 1637 aa0.16□□□□□ -2.38
RNU6-271P-201ENST00000363858 SYNE1Q8NF91 8797 aaKnown RBP0.16□□□□□ -2.38
RNU6-271P-201ENST00000363858 FAT4Q6V0I7 4981 aa0.16□□□□□ -2.38
RNU6-271P-201ENST00000363858 MUC5BQ9HC84 5762 aaPredicted RBP0.16□□□□□ -2.38
RNU6-271P-201ENST00000363858 STAB2Q8WWQ8 2551 aa0.15□□□□□ -2.38
RNU6-271P-201ENST00000363858 PDZD2O15018 2839 aa0.15□□□□□ -2.38
RNU6-271P-201ENST00000363858 ZANQ9Y493 2812 aa0.15□□□□□ -2.38
RNU6-271P-201ENST00000363858 NBEAL1Q6ZS30 2694 aa0.15□□□□□ -2.39
RNU6-271P-201ENST00000363858 FAM208AQ9UK61 1670 aaKnown RBP0.15□□□□□ -2.39
RNU6-271P-201ENST00000363858 LPAP08519 4548 aa0.15□□□□□ -2.39
RNU6-271P-201ENST00000363858 TGP01266 2768 aa0.15□□□□□ -2.39
RNU6-271P-201ENST00000363858 MTORP42345 2549 aa0.15□□□□□ -2.39
RNU6-271P-201ENST00000363858 PKD1P98161 4303 aa0.15□□□□□ -2.39
RNU6-271P-201ENST00000363858 EPG5Q9HCE0 2579 aa0.15□□□□□ -2.39
RNU6-271P-201ENST00000363858 TACC2O95359 2948 aa0.15□□□□□ -2.39
RNU6-271P-201ENST00000363858 ALMS1Q8TCU4 4167 aa0.15□□□□□ -2.39
RNU6-271P-201ENST00000363858 LRRK2Q5S007 2527 aa0.15□□□□□ -2.39
RNU6-271P-201ENST00000363858 A0A0C4DFX4 3053 aa0.15□□□□□ -2.39
RNU6-271P-201ENST00000363858 IQGAP1P46940 1657 aa0.14□□□□□ -2.39
RNU6-271P-201ENST00000363858 FAT2Q9NYQ8 4349 aa0.14□□□□□ -2.39
RNU6-271P-201ENST00000363858 KALRNO60229 2985 aa0.14□□□□□ -2.39
RNU6-271P-201ENST00000363858 IGLV5-48A0A075B6I7 105 aa0.14□□□□□ -2.39
RNU6-271P-201ENST00000363858 M0QY20 66 aa0.14□□□□□ -2.39
RNU6-271P-201ENST00000363858 WFDC10BQ8IUB3 73 aa0.14□□□□□ -2.39
RNU6-271P-201ENST00000363858 KAAG1Q9UBP8 84 aa0.14□□□□□ -2.39
RNU6-271P-201ENST00000363858 DMXL1Q9Y485 3027 aa0.14□□□□□ -2.39
RNU6-271P-201ENST00000363858 SRRM2Q9UQ35 2752 aaKnown RBP0.14□□□□□ -2.39
RNU6-271P-201ENST00000363858 ANKHD1Q8IWZ3 2542 aaKnown RBP0.14□□□□□ -2.39
RNU6-271P-201ENST00000363858 DDX60Q8IY21 1712 aaKnown RBP0.13□□□□□ -2.39
RNU6-271P-201ENST00000363858 SPG11Q96JI7 2443 aa0.13□□□□□ -2.39
RNU6-271P-201ENST00000363858 HIVEP1P15822 2718 aa0.13□□□□□ -2.39
RNU6-271P-201ENST00000363858 MDN1Q9NU22 5596 aa0.13□□□□□ -2.39
RNU6-271P-201ENST00000363858 SPRR2AP35326 72 aa0.13□□□□□ -2.39
RNU6-271P-201ENST00000363858 DEFB131AP59861 70 aa0.13□□□□□ -2.39
RNU6-271P-201ENST00000363858 WDR87Q6ZQQ6 2873 aa0.13□□□□□ -2.39
RNU6-271P-201ENST00000363858 TEP1Q99973 2627 aaKnown RBP0.13□□□□□ -2.39
RNU6-271P-201ENST00000363858 TRPM2O94759 1503 aa0.13□□□□□ -2.39
RNU6-271P-201ENST00000363858 STAB1Q9NY15 2570 aa0.12□□□□□ -2.39
RNU6-271P-201ENST00000363858 NBEAQ8NFP9 2946 aa0.12□□□□□ -2.39
RNU6-271P-201ENST00000363858 MMP24-AS1A0A0U1RRL7 71 aa0.12□□□□□ -2.39
RNU6-271P-201ENST00000363858 LINC01546A6NGU7 62 aa0.12□□□□□ -2.39
RNU6-271P-201ENST00000363858 DEFB110Q30KQ9 67 aa0.12□□□□□ -2.39
RNU6-271P-201ENST00000363858 TOMM5Q8N4H5 51 aa0.12□□□□□ -2.39
RNU6-271P-201ENST00000363858 SMIM2Q9BVW6 85 aa0.12□□□□□ -2.39
RNU6-271P-201ENST00000363858 CLTCL1P53675 1640 aa0.12□□□□□ -2.39
RNU6-271P-201ENST00000363858 PKHD1P08F94 4074 aa0.12□□□□□ -2.39
RNU6-271P-201ENST00000363858 FASNP49327 2511 aaKnown RBP0.11□□□□□ -2.39
RNU6-271P-201ENST00000363858 TNP1P09430 55 aa0.11□□□□□ -2.39
RNU6-271P-201ENST00000363858 SPRR2GQ9BYE4 73 aa0.11□□□□□ -2.39
RNU6-271P-201ENST00000363858 ACACAQ13085 2346 aa0.11□□□□□ -2.39
RNU6-271P-201ENST00000363858 MXRA5Q9NR99 2828 aa0.11□□□□□ -2.39
RNU6-271P-201ENST00000363858 HECTD4Q9Y4D8 3996 aa0.11□□□□□ -2.39
RNU6-271P-201ENST00000363858 RIF1Q5UIP0 2472 aaKnown RBP0.1□□□□□ -2.39
RNU6-271P-201ENST00000363858 NFAT5O94916 1531 aa0.1□□□□□ -2.39
RNU6-271P-201ENST00000363858 A8MTW9 85 aa0.1□□□□□ -2.39
RNU6-271P-201ENST00000363858 TFF3Q07654 80 aa0.1□□□□□ -2.39
RNU6-271P-201ENST00000363858 SONP18583 2426 aaKnown RBP0.1□□□□□ -2.39
RNU6-271P-201ENST00000363858 HSPG2P98160 4391 aa0.1□□□□□ -2.39
RNU6-271P-201ENST00000363858 LRP2P98164 4655 aa0.1□□□□□ -2.39
RNU6-271P-201ENST00000363858 HMCN2Q8NDA2 5059 aa0.09□□□□□ -2.39
RNU6-271P-201ENST00000363858 ATP7AQ04656 1500 aa0.09□□□□□ -2.39
RNU6-271P-201ENST00000363858 FAM186AA6NE01 2351 aa0.09□□□□□ -2.39
RNU6-271P-201ENST00000363858 M0QZ58 72 aa0.09□□□□□ -2.4
RNU6-271P-201ENST00000363858 NDUFA1O15239 70 aa0.09□□□□□ -2.4
RNU6-271P-201ENST00000363858 SPRR2EP22531 72 aa0.09□□□□□ -2.4
RNU6-271P-201ENST00000363858 RANBP2P49792 3224 aaKnown RBP0.08□□□□□ -2.4
RNU6-271P-201ENST00000363858 NBEAL2Q6ZNJ1 2754 aa0.08□□□□□ -2.4
RNU6-271P-201ENST00000363858 MUC5ACP98088 5654 aa0.08□□□□□ -2.4
RNU6-271P-201ENST00000363858 MGAM2Q2M2H8 2515 aa0.08□□□□□ -2.4
RNU6-271P-201ENST00000363858 KRTAP6-2Q3LI66 62 aa0.08□□□□□ -2.4
RNU6-271P-201ENST00000363858 ITPR1Q14643 2758 aa0.07□□□□□ -2.4
RNU6-271P-201ENST00000363858 ACACBO00763 2458 aa0.07□□□□□ -2.4
RNU6-271P-201ENST00000363858 AKAP9Q99996 3911 aa0.07□□□□□ -2.4
RNU6-271P-201ENST00000363858 LRP1BQ9NZR2 4599 aa0.07□□□□□ -2.4
RNU6-271P-201ENST00000363858 SAMD9LQ8IVG5 1584 aa0.06□□□□□ -2.4
RNU6-271P-201ENST00000363858 LYSTQ99698 3801 aa0.06□□□□□ -2.4
RNU6-271P-201ENST00000363858 FRYQ5TBA9 3013 aa0.06□□□□□ -2.4
RNU6-271P-201ENST00000363858 TRIOO75962 3097 aa0.06□□□□□ -2.4
RNU6-271P-201ENST00000363858 TLN2Q9Y4G6 2542 aa0.06□□□□□ -2.4
RNU6-271P-201ENST00000363858 MT1AP04731 61 aa0.06□□□□□ -2.4
RNU6-271P-201ENST00000363858 CLPSL2Q6UWE3 100 aa0.06□□□□□ -2.4
RNU6-271P-201ENST00000363858 MYO18BQ8IUG5 2567 aa0.06□□□□□ -2.4
RNU6-271P-201ENST00000363858 ITPR3Q14573 2671 aa0.06□□□□□ -2.4
RNU6-271P-201ENST00000363858 VPS13BQ7Z7G8 4022 aa0.06□□□□□ -2.4
RNU6-271P-201ENST00000363858 FLGP20930 4061 aaPredicted RBP0.06□□□□□ -2.4
RNU6-271P-201ENST00000363858 KMT2DO14686 5537 aa0.06□□□□□ -2.4
RNU6-271P-201ENST00000363858 COL12A1Q99715 3063 aa0.05□□□□□ -2.4
RNU6-271P-201ENST00000363858 SPRR2FQ96RM1 72 aa0.05□□□□□ -2.4
RNU6-271P-201ENST00000363858 TOP2AP11388 1531 aaKnown RBP0.04□□□□□ -2.4
RNU6-271P-201ENST00000363858 LAMA1P25391 3075 aa0.04□□□□□ -2.4
RNU6-271P-201ENST00000363858 DNAH3Q8TD57 4116 aa0.04□□□□□ -2.4
RNU6-271P-201ENST00000363858 POLR2KP53803 58 aaKnown RBP0.04□□□□□ -2.4
RNU6-271P-201ENST00000363858 USP9YO00507 2555 aaPredicted RBP0.04□□□□□ -2.4
RNU6-271P-201ENST00000363858 USP9XQ93008 2570 aaPredicted RBP0.04□□□□□ -2.4
RNU6-271P-201ENST00000363858 DNAH9Q9NYC9 4486 aa0.04□□□□□ -2.4
RNU6-271P-201ENST00000363858 ANK3Q12955 4377 aaKnown RBP0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms