RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.82□□□□□ -2.54
RNU6-1339P-201ENST00000363574 VPS13BQ7Z7G8 4022 aa-0.83□□□□□ -2.54
RNU6-1339P-201ENST00000363574 WT1-ASQ06250 92 aa-0.83□□□□□ -2.54
RNU6-1339P-201ENST00000363574 DEFB114Q30KQ6 69 aa-0.83□□□□□ -2.54
RNU6-1339P-201ENST00000363574 FASNP49327 2511 aaKnown RBP-0.83□□□□□ -2.54
RNU6-1339P-201ENST00000363574 GCN1Q92616 2671 aaKnown RBP-0.84□□□□□ -2.54
RNU6-1339P-201ENST00000363574 RPS27P42677 84 aaKnown RBP-0.84□□□□□ -2.54
RNU6-1339P-201ENST00000363574 MINOS1Q5TGZ0 78 aa-0.84□□□□□ -2.54
RNU6-1339P-201ENST00000363574 RPS27LQ71UM5 84 aaKnown RBP-0.84□□□□□ -2.54
RNU6-1339P-201ENST00000363574 GNG13Q9P2W3 67 aa-0.84□□□□□ -2.54
RNU6-1339P-201ENST00000363574 TEP1Q99973 2627 aaKnown RBP-0.84□□□□□ -2.54
RNU6-1339P-201ENST00000363574 TACC2O95359 2948 aa-0.84□□□□□ -2.54
RNU6-1339P-201ENST00000363574 DNAH6Q9C0G6 4158 aa-0.84□□□□□ -2.54
RNU6-1339P-201ENST00000363574 ANKRD11Q6UB99 2663 aaPredicted RBP-0.85□□□□□ -2.55
RNU6-1339P-201ENST00000363574 ANK3Q12955 4377 aaKnown RBP-0.85□□□□□ -2.55
RNU6-1339P-201ENST00000363574 NBPF19A0A087WUL8 3843 aa-0.85□□□□□ -2.55
RNU6-1339P-201ENST00000363574 ABCA13Q86UQ4 5058 aa-0.85□□□□□ -2.55
RNU6-1339P-201ENST00000363574 C3P01024 1663 aa-0.86□□□□□ -2.55
RNU6-1339P-201ENST00000363574 CEP290O15078 2479 aa-0.86□□□□□ -2.55
RNU6-1339P-201ENST00000363574 PKD1L2Q7Z442 2459 aa-0.86□□□□□ -2.55
RNU6-1339P-201ENST00000363574 BPTFQ12830 3046 aa-0.86□□□□□ -2.55
RNU6-1339P-201ENST00000363574 PKHD1L1Q86WI1 4243 aa-0.87□□□□□ -2.55
RNU6-1339P-201ENST00000363574 AKAP9Q99996 3911 aa-0.87□□□□□ -2.55
RNU6-1339P-201ENST00000363574 KIF1AQ12756 1690 aa-0.87□□□□□ -2.55
RNU6-1339P-201ENST00000363574 MTORP42345 2549 aa-0.87□□□□□ -2.55
RNU6-1339P-201ENST00000363574 ABCC6O95255 1503 aa-0.87□□□□□ -2.55
RNU6-1339P-201ENST00000363574 FAT1Q14517 4588 aa-0.88□□□□□ -2.55
RNU6-1339P-201ENST00000363574 MT4P47944 62 aa-0.88□□□□□ -2.55
RNU6-1339P-201ENST00000363574 APOBP04114 4563 aaKnown RBP-0.89□□□□□ -2.55
RNU6-1339P-201ENST00000363574 STARD9Q9P2P6 4700 aa-0.89□□□□□ -2.55
RNU6-1339P-201ENST00000363574 DNMBPQ6XZF7 1577 aa-0.91□□□□□ -2.55
RNU6-1339P-201ENST00000363574 TOGARAM1Q9Y4F4 1720 aa-0.91□□□□□ -2.55
RNU6-1339P-201ENST00000363574 C6orf48Q9UBA6 75 aa-0.92□□□□□ -2.56
RNU6-1339P-201ENST00000363574 NCBP2-AS2Q69YL0 99 aa-0.93□□□□□ -2.56
RNU6-1339P-201ENST00000363574 VPS13DQ5THJ4 4388 aa-0.93□□□□□ -2.56
RNU6-1339P-201ENST00000363574 DEFB110Q30KQ9 67 aa-0.94□□□□□ -2.56
RNU6-1339P-201ENST00000363574 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-1339P-201ENST00000363574 KALRNO60229 2985 aa-0.94□□□□□ -2.56
RNU6-1339P-201ENST00000363574 MROH1Q8NDA8 1641 aa-0.95□□□□□ -2.56
RNU6-1339P-201ENST00000363574 LINC01549A6NIU2 74 aa-0.96□□□□□ -2.56
RNU6-1339P-201ENST00000363574 DNAH3Q8TD57 4116 aa-0.96□□□□□ -2.56
RNU6-1339P-201ENST00000363574 LAMA1P25391 3075 aa-0.96□□□□□ -2.56
RNU6-1339P-201ENST00000363574 LRRK2Q5S007 2527 aa-0.96□□□□□ -2.56
RNU6-1339P-201ENST00000363574 SACSQ9NZJ4 4579 aa-0.97□□□□□ -2.56
RNU6-1339P-201ENST00000363574 FCER1GP30273 86 aa-0.97□□□□□ -2.56
RNU6-1339P-201ENST00000363574 MADDQ8WXG6 1647 aa-0.98□□□□□ -2.57
RNU6-1339P-201ENST00000363574 MYO18BQ8IUG5 2567 aa-0.99□□□□□ -2.57
RNU6-1339P-201ENST00000363574 UTP20O75691 2785 aaKnown RBP-1□□□□□ -2.57
RNU6-1339P-201ENST00000363574 DNAH11Q96DT5 4516 aa-1□□□□□ -2.57
RNU6-1339P-201ENST00000363574 IGLV5-48A0A075B6I7 105 aa-1□□□□□ -2.57
RNU6-1339P-201ENST00000363574 SFTA3P0C7M3 94 aa-1□□□□□ -2.57
RNU6-1339P-201ENST00000363574 KRTAP20-1Q3LI63 56 aa-1□□□□□ -2.57
RNU6-1339P-201ENST00000363574 NBEAQ8NFP9 2946 aa-1.01□□□□□ -2.57
RNU6-1339P-201ENST00000363574 FAM186AA6NE01 2351 aa-1.01□□□□□ -2.57
RNU6-1339P-201ENST00000363574 H3BUA1 57 aa-1.01□□□□□ -2.57
RNU6-1339P-201ENST00000363574 CLASP1Q7Z460 1538 aa-1.01□□□□□ -2.57
RNU6-1339P-201ENST00000363574 MUC17Q685J3 4493 aa-1.02□□□□□ -2.57
RNU6-1339P-201ENST00000363574 EFCAB5A4FU69 1503 aa-1.02□□□□□ -2.57
RNU6-1339P-201ENST00000363574 ACACAQ13085 2346 aa-1.02□□□□□ -2.57
RNU6-1339P-201ENST00000363574 NBEAL2Q6ZNJ1 2754 aa-1.04□□□□□ -2.58
RNU6-1339P-201ENST00000363574 ACACBO00763 2458 aa-1.05□□□□□ -2.58
RNU6-1339P-201ENST00000363574 DNHD1Q96M86 4753 aa-1.05□□□□□ -2.58
RNU6-1339P-201ENST00000363574 K7EMI3 77 aa-1.05□□□□□ -2.58
RNU6-1339P-201ENST00000363574 MGAM2Q2M2H8 2515 aa-1.05□□□□□ -2.58
RNU6-1339P-201ENST00000363574 MMP24-AS1A0A0U1RRL7 71 aa-1.07□□□□□ -2.58
RNU6-1339P-201ENST00000363574 LY75O60449 1722 aa-1.07□□□□□ -2.58
RNU6-1339P-201ENST00000363574 TRIOO75962 3097 aa-1.07□□□□□ -2.58
RNU6-1339P-201ENST00000363574 ITPR3Q14573 2671 aa-1.08□□□□□ -2.58
RNU6-1339P-201ENST00000363574 RANBP2P49792 3224 aaKnown RBP-1.09□□□□□ -2.58
RNU6-1339P-201ENST00000363574 CCDC168Q8NDH2 2452 aa-1.09□□□□□ -2.58
RNU6-1339P-201ENST00000363574 WDR87Q6ZQQ6 2873 aa-1.1□□□□□ -2.58
RNU6-1339P-201ENST00000363574 CROCC2H7BZ55 1655 aa-1.1□□□□□ -2.58
RNU6-1339P-201ENST00000363574 ABCA6Q8N139 1617 aa-1.1□□□□□ -2.59
RNU6-1339P-201ENST00000363574 BIRC6Q9NR09 4857 aa-1.1□□□□□ -2.59
RNU6-1339P-201ENST00000363574 TIAM1Q13009 1591 aa-1.1□□□□□ -2.59
RNU6-1339P-201ENST00000363574 CDC42BPAQ5VT25 1732 aa-1.1□□□□□ -2.59
RNU6-1339P-201ENST00000363574 M0R1W7 72 aa-1.11□□□□□ -2.59
RNU6-1339P-201ENST00000363574 KRTAP19-5Q3LI72 72 aa-1.11□□□□□ -2.59
RNU6-1339P-201ENST00000363574 NOP10Q9NPE3 64 aaKnown RBP-1.11□□□□□ -2.59
RNU6-1339P-201ENST00000363574 A0A087WWC5 75 aa-1.12□□□□□ -2.59
RNU6-1339P-201ENST00000363574 DNAH2Q9P225 4427 aa-1.12□□□□□ -2.59
RNU6-1339P-201ENST00000363574 CCDC180Q9P1Z9 1646 aa-1.13□□□□□ -2.59
RNU6-1339P-201ENST00000363574 TNP1P09430 55 aa-1.13□□□□□ -2.59
RNU6-1339P-201ENST00000363574 LAMA2P24043 3122 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1339P-201ENST00000363574 DNAH1Q9P2D7 4330 aa-1.15□□□□□ -2.59
RNU6-1339P-201ENST00000363574 USP9YO00507 2555 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-1339P-201ENST00000363574 GLI2P10070 1586 aa-1.17□□□□□ -2.6
RNU6-1339P-201ENST00000363574 A0A0C4DFX4 3053 aa-1.18□□□□□ -2.6
RNU6-1339P-201ENST00000363574 MT1HP80294 61 aa-1.18□□□□□ -2.6
RNU6-1339P-201ENST00000363574 SERF2P84101 59 aa-1.18□□□□□ -2.6
RNU6-1339P-201ENST00000363574 NMES1Q9C002 83 aa-1.18□□□□□ -2.6
RNU6-1339P-201ENST00000363574 CELSR3Q9NYQ7 3312 aa-1.2□□□□□ -2.6
RNU6-1339P-201ENST00000363574 EEA1Q15075 1411 aa-1.21□□□□□ -2.6
RNU6-1339P-201ENST00000363574 IGIPA6NJ69 53 aa-1.21□□□□□ -2.6
RNU6-1339P-201ENST00000363574 DEFB1P60022 68 aa-1.21□□□□□ -2.6
RNU6-1339P-201ENST00000363574 RIF1Q5UIP0 2472 aaKnown RBP-1.21□□□□□ -2.6
RNU6-1339P-201ENST00000363574 DNAH8Q96JB1 4490 aa-1.23□□□□□ -2.61
RNU6-1339P-201ENST00000363574 COL6A5A8TX70 2615 aa-1.23□□□□□ -2.61
RNU6-1339P-201ENST00000363574 CLPSL2Q6UWE3 100 aa-1.23□□□□□ -2.61
RNU6-1339P-201ENST00000363574 TMEM167BQ9NRX6 74 aa-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms