RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 LRBAP50851 2863 aa6.19□□□□□ -1.42
CLIP1-203ENST00000361654 NOTCH2NLQ7Z3S9 236 aa6.16□□□□□ -1.42
CLIP1-203ENST00000361654 KRTAP13-2Q52LG2 175 aa6.15□□□□□ -1.42
CLIP1-203ENST00000361654 NBEAL2Q6ZNJ1 2754 aa6.15□□□□□ -1.42
CLIP1-203ENST00000361654 TNP1P09430 55 aa6.15□□□□□ -1.43
CLIP1-203ENST00000361654 KRTAP16-1A8MUX0 517 aa6.12□□□□□ -1.43
CLIP1-203ENST00000361654 KRTAP11-1Q8IUC1 163 aa6.1□□□□□ -1.43
CLIP1-203ENST00000361654 UBR5O95071 2799 aaPredicted RBP6.1□□□□□ -1.43
CLIP1-203ENST00000361654 WDFY3Q8IZQ1 3526 aa6.08□□□□□ -1.44
CLIP1-203ENST00000361654 CFAP47Q6ZTR5 3102 aa6.07□□□□□ -1.44
CLIP1-203ENST00000361654 KRTAP13-1Q8IUC0 172 aa6.07□□□□□ -1.44
CLIP1-203ENST00000361654 ITPR2Q14571 2701 aa6.07□□□□□ -1.44
CLIP1-203ENST00000361654 ITPR1Q14643 2758 aa6.06□□□□□ -1.44
CLIP1-203ENST00000361654 DMDP11532 3685 aa6.04□□□□□ -1.44
CLIP1-203ENST00000361654 ATMQ13315 3056 aa6.03□□□□□ -1.44
CLIP1-203ENST00000361654 DMXL2Q8TDJ6 3036 aa6.03□□□□□ -1.44
CLIP1-203ENST00000361654 KRTAP7-1Q8IUC3 87 aa6.02□□□□□ -1.45
CLIP1-203ENST00000361654 LOC400499M0QZD8 3231 aa6.01□□□□□ -1.45
CLIP1-203ENST00000361654 KRTAP10-8P60410 259 aa5.99□□□□□ -1.45
CLIP1-203ENST00000361654 ASH1LQ9NR48 2969 aaKnown RBP5.99□□□□□ -1.45
CLIP1-203ENST00000361654 TENM4Q6N022 2769 aa5.97□□□□□ -1.45
CLIP1-203ENST00000361654 KMT2BQ9UMN6 2715 aaPredicted RBP5.97□□□□□ -1.45
CLIP1-203ENST00000361654 DCHS1Q96JQ0 3298 aa5.97□□□□□ -1.45
CLIP1-203ENST00000361654 ZFHX4Q86UP3 3567 aa5.95□□□□□ -1.46
CLIP1-203ENST00000361654 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
CLIP1-203ENST00000361654 TPRXLQ17RH7 258 aa5.94□□□□□ -1.46
CLIP1-203ENST00000361654 XP32Q5T750 250 aa5.94□□□□□ -1.46
CLIP1-203ENST00000361654 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
CLIP1-203ENST00000361654 KRTAP10-10P60014 251 aa5.93□□□□□ -1.46
CLIP1-203ENST00000361654 DMXL1Q9Y485 3027 aa5.92□□□□□ -1.46
CLIP1-203ENST00000361654 PP632Q6XCG6 107 aa5.91□□□□□ -1.46
CLIP1-203ENST00000361654 A0A1B0GVY2 172 aa5.91□□□□□ -1.46
CLIP1-203ENST00000361654 CSMD1Q96PZ7 3565 aa5.89□□□□□ -1.47
CLIP1-203ENST00000361654 HRNRQ86YZ3 2850 aaPredicted RBP5.89□□□□□ -1.47
CLIP1-203ENST00000361654 COL12A1Q99715 3063 aa5.89□□□□□ -1.47
CLIP1-203ENST00000361654 C10orf95Q9H7T3 257 aa5.88□□□□□ -1.47
CLIP1-203ENST00000361654 HIVEP1P15822 2718 aa5.87□□□□□ -1.47
CLIP1-203ENST00000361654 FLNCQ14315 2725 aa5.87□□□□□ -1.47
CLIP1-203ENST00000361654 KRTAP1-4P0C5Y4 121 aa5.83□□□□□ -1.48
CLIP1-203ENST00000361654 SMG1Q96Q15 3661 aaKnown RBP5.83□□□□□ -1.48
CLIP1-203ENST00000361654 UTP20O75691 2785 aaKnown RBP5.83□□□□□ -1.48
CLIP1-203ENST00000361654 ASPMQ8IZT6 3477 aa5.83□□□□□ -1.48
CLIP1-203ENST00000361654 APCP25054 2843 aa5.82□□□□□ -1.48
CLIP1-203ENST00000361654 NDUFAF8A1L188 74 aa5.82□□□□□ -1.48
CLIP1-203ENST00000361654 ZANQ9Y493 2812 aa5.78□□□□□ -1.48
CLIP1-203ENST00000361654 KRTAP13-3Q3SY46 172 aa5.72□□□□□ -1.49
CLIP1-203ENST00000361654 FBN2P35556 2912 aa5.72□□□□□ -1.49
CLIP1-203ENST00000361654 RELNP78509 3460 aa5.72□□□□□ -1.49
CLIP1-203ENST00000361654 CELSR2Q9HCU4 2923 aa5.69□□□□□ -1.5
CLIP1-203ENST00000361654 LAMA5O15230 3695 aa5.69□□□□□ -1.5
CLIP1-203ENST00000361654 DCHS2Q6V1P9 2916 aa5.68□□□□□ -1.5
CLIP1-203ENST00000361654 SVEP1Q4LDE5 3571 aa5.67□□□□□ -1.5
CLIP1-203ENST00000361654 TENM3Q9P273 2699 aa5.66□□□□□ -1.5
CLIP1-203ENST00000361654 NIPBLQ6KC79 2804 aaeCLIP5.66□□□□□ -1.51e-6■□□□□ 9
CLIP1-203ENST00000361654 NF1P21359 2839 aa5.63□□□□□ -1.51
CLIP1-203ENST00000361654 SPENQ96T58 3664 aaKnown RBP5.61□□□□□ -1.51
CLIP1-203ENST00000361654 CRYBG3Q68DQ2 2970 aa5.61□□□□□ -1.51
CLIP1-203ENST00000361654 H0YAA0 97 aa5.59□□□□□ -1.51
CLIP1-203ENST00000361654 MXRA5Q9NR99 2828 aa5.59□□□□□ -1.51
CLIP1-203ENST00000361654 P0C880 135 aa5.57□□□□□ -1.52
CLIP1-203ENST00000361654 TENM1Q9UKZ4 2725 aa5.56□□□□□ -1.52
CLIP1-203ENST00000361654 CELSR1Q9NYQ6 3014 aa5.55□□□□□ -1.52
CLIP1-203ENST00000361654 TENM2Q9NT68 2774 aa5.52□□□□□ -1.53
CLIP1-203ENST00000361654 CUBNO60494 3623 aa5.48□□□□□ -1.53
CLIP1-203ENST00000361654 BSNQ9UPA5 3926 aa5.46□□□□□ -1.54
CLIP1-203ENST00000361654 ZFHX3Q15911 3703 aa5.35□□□□□ -1.55
CLIP1-203ENST00000361654 TGP01266 2768 aa5.35□□□□□ -1.55
CLIP1-203ENST00000361654 KRTAP13-4Q3LI77 160 aa5.31□□□□□ -1.56
CLIP1-203ENST00000361654 PDZD2O15018 2839 aa5.26□□□□□ -1.57
CLIP1-203ENST00000361654 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
CLIP1-203ENST00000361654 PKD1L1Q8TDX9 2849 aa5.24□□□□□ -1.57
CLIP1-203ENST00000361654 VWFP04275 2813 aa5.24□□□□□ -1.57
CLIP1-203ENST00000361654 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
CLIP1-203ENST00000361654 CSMD2Q7Z408 3487 aa5.19□□□□□ -1.58
CLIP1-203ENST00000361654 VPS13CQ709C8 3753 aa5.17□□□□□ -1.58
CLIP1-203ENST00000361654 SRRM2Q9UQ35 2752 aaKnown RBP5.17□□□□□ -1.58
CLIP1-203ENST00000361654 NBPF19A0A087WUL8 3843 aa5.16□□□□□ -1.58
CLIP1-203ENST00000361654 KRTAP12-1P59990 96 aa5.16□□□□□ -1.58
CLIP1-203ENST00000361654 KRTAP3-1Q9BYR8 98 aa5.16□□□□□ -1.58
CLIP1-203ENST00000361654 FBN3Q75N90 2809 aa5.13□□□□□ -1.59
CLIP1-203ENST00000361654 ANK3Q12955 4377 aaKnown RBP5.1□□□□□ -1.59
CLIP1-203ENST00000361654 AKAP9Q99996 3911 aa5.06□□□□□ -1.6
CLIP1-203ENST00000361654 FBN1P35555 2871 aaKnown RBP5.06□□□□□ -1.6
CLIP1-203ENST00000361654 TRRAPQ9Y4A5 3859 aa5.05□□□□□ -1.6
CLIP1-203ENST00000361654 MT1HL1P0DM35 61 aa5.03□□□□□ -1.6
CLIP1-203ENST00000361654 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
CLIP1-203ENST00000361654 KRTAP10-12P60413 245 aa4.99□□□□□ -1.61
CLIP1-203ENST00000361654 CRCT1Q9UGL9 99 aa4.97□□□□□ -1.61
CLIP1-203ENST00000361654 OTOGQ6ZRI0 2925 aa4.97□□□□□ -1.61
CLIP1-203ENST00000361654 ZNF469Q96JG9 3925 aaPredicted RBP4.95□□□□□ -1.62
CLIP1-203ENST00000361654 CSMD3Q7Z407 3707 aa4.89□□□□□ -1.63
CLIP1-203ENST00000361654 MEGF8Q7Z7M0 2845 aa4.88□□□□□ -1.63
CLIP1-203ENST00000361654 KRTAP3-2Q9BYR7 98 aa4.87□□□□□ -1.63
CLIP1-203ENST00000361654 KRTAP4-5Q9BYR2 181 aa4.85□□□□□ -1.63
CLIP1-203ENST00000361654 KRTAP3-3Q9BYR6 98 aa4.84□□□□□ -1.63
CLIP1-203ENST00000361654 COL7A1Q02388 2944 aa4.84□□□□□ -1.63
CLIP1-203ENST00000361654 HUWE1Q7Z6Z7 4374 aaKnown RBP4.82□□□□□ -1.64
CLIP1-203ENST00000361654 INE1O15225 51 aa4.82□□□□□ -1.64
CLIP1-203ENST00000361654 DNHD1Q96M86 4753 aa4.81□□□□□ -1.64
CLIP1-203ENST00000361654 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms