RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 DMBT1Q9UGM3 2413 aaPredicted RBP9.5□□□□□ -0.89
CLSTN1-201ENST00000361311 KMT2BQ9UMN6 2715 aaPredicted RBP9.5□□□□□ -0.89
CLSTN1-201ENST00000361311 KRTAP11-1Q8IUC1 163 aa9.49□□□□□ -0.89
CLSTN1-201ENST00000361311 DMDP11532 3685 aa9.49□□□□□ -0.89
CLSTN1-201ENST00000361311 PLAC8Q9NZF1 115 aa9.48□□□□□ -0.89
CLSTN1-201ENST00000361311 SPATA8Q6RVD6 105 aa9.48□□□□□ -0.89
CLSTN1-201ENST00000361311 A0A0D9SG42 100 aa9.48□□□□□ -0.89
CLSTN1-201ENST00000361311 CRYBG3Q68DQ2 2970 aa9.48□□□□□ -0.89
CLSTN1-201ENST00000361311 LINC00483Q53H64 154 aa9.47□□□□□ -0.89
CLSTN1-201ENST00000361311 RELNP78509 3460 aa9.47□□□□□ -0.89
CLSTN1-201ENST00000361311 PANO1I0J062 215 aa9.47□□□□□ -0.89
CLSTN1-201ENST00000361311 ADM2Q7Z4H4 148 aa9.46□□□□□ -0.89
CLSTN1-201ENST00000361311 SMG1Q96Q15 3661 aaKnown RBP9.42□□□□□ -0.9
CLSTN1-201ENST00000361311 SMR3BP02814 79 aaPredicted RBP9.42□□□□□ -0.9
CLSTN1-201ENST00000361311 LAMA5O15230 3695 aa9.36□□□□□ -0.91
CLSTN1-201ENST00000361311 J3QL48 77 aa9.36□□□□□ -0.91
CLSTN1-201ENST00000361311 FLG2Q5D862 2391 aaPredicted RBP9.34□□□□□ -0.91
CLSTN1-201ENST00000361311 CELSR1Q9NYQ6 3014 aa9.29□□□□□ -0.92
CLSTN1-201ENST00000361311 KRTAP13-1Q8IUC0 172 aa9.27□□□□□ -0.92
CLSTN1-201ENST00000361311 SPENQ96T58 3664 aaKnown RBP9.23□□□□□ -0.93
CLSTN1-201ENST00000361311 H1FX-AS1Q4G0G2 97 aa9.22□□□□□ -0.93
CLSTN1-201ENST00000361311 SVEP1Q4LDE5 3571 aa9.18□□□□□ -0.94
CLSTN1-201ENST00000361311 ROMO1P60602 79 aa9.17□□□□□ -0.94
CLSTN1-201ENST00000361311 KRTAP25-1Q3LHN0 102 aa9.17□□□□□ -0.94
CLSTN1-201ENST00000361311 RPL37P61927 97 aaKnown RBP9.16□□□□□ -0.94
CLSTN1-201ENST00000361311 TENM3Q9P273 2699 aa9.13□□□□□ -0.95
CLSTN1-201ENST00000361311 Q6ZRN7 208 aaPredicted RBP9.12□□□□□ -0.95
CLSTN1-201ENST00000361311 CUBNO60494 3623 aa9.06□□□□□ -0.96
CLSTN1-201ENST00000361311 KRTAP10-2P60368 255 aa9.05□□□□□ -0.96
CLSTN1-201ENST00000361311 KRTAP10-1P60331 282 aa9.02□□□□□ -0.97
CLSTN1-201ENST00000361311 LUZP6Q538Z0 58 aa9□□□□□ -0.97
CLSTN1-201ENST00000361311 PDZD2O15018 2839 aa8.99□□□□□ -0.97
CLSTN1-201ENST00000361311 KRTAP21-3Q3LHN1 58 aa8.99□□□□□ -0.97
CLSTN1-201ENST00000361311 KRTAP13-2Q52LG2 175 aa8.99□□□□□ -0.97
CLSTN1-201ENST00000361311 COX6B2Q6YFQ2 88 aa8.99□□□□□ -0.97
CLSTN1-201ENST00000361311 S4R3F8 94 aa8.99□□□□□ -0.97
CLSTN1-201ENST00000361311 VWFP04275 2813 aa8.95□□□□□ -0.98
CLSTN1-201ENST00000361311 TENM1Q9UKZ4 2725 aa8.91□□□□□ -0.98
CLSTN1-201ENST00000361311 Q6ZSA8 131 aa8.9□□□□□ -0.98
CLSTN1-201ENST00000361311 A8MUU9 505 aa8.9□□□□□ -0.99
CLSTN1-201ENST00000361311 TGP01266 2768 aa8.88□□□□□ -0.99
CLSTN1-201ENST00000361311 PKD1L1Q8TDX9 2849 aa8.84□□□□□ -0.99
CLSTN1-201ENST00000361311 NDUFAF8A1L188 74 aa8.82□□□□□ -1
CLSTN1-201ENST00000361311 H0YAA0 97 aa8.8□□□□□ -1
CLSTN1-201ENST00000361311 Q5VSD8 79 aa8.8□□□□□ -1
CLSTN1-201ENST00000361311 KRTAP13-3Q3SY46 172 aa8.79□□□□□ -1
CLSTN1-201ENST00000361311 KRTAP16-1A8MUX0 517 aa8.78□□□□□ -1
CLSTN1-201ENST00000361311 CAMK2N1Q7Z7J9 78 aa8.77□□□□□ -1.01
CLSTN1-201ENST00000361311 RPS29P62273 56 aaKnown RBP8.76□□□□□ -1.01
CLSTN1-201ENST00000361311 R4GN34 69 aa8.75□□□□□ -1.01
CLSTN1-201ENST00000361311 A0A0A0MQY5 61 aa8.75□□□□□ -1.01
CLSTN1-201ENST00000361311 OTOGQ6ZRI0 2925 aa8.71□□□□□ -1.02
CLSTN1-201ENST00000361311 TENM2Q9NT68 2774 aa8.7□□□□□ -1.02
CLSTN1-201ENST00000361311 FBN1P35555 2871 aaKnown RBP8.7□□□□□ -1.02
CLSTN1-201ENST00000361311 ZFHX3Q15911 3703 aa8.68□□□□□ -1.02
CLSTN1-201ENST00000361311 M0QZ58 72 aa8.66□□□□□ -1.02
CLSTN1-201ENST00000361311 SRRM2Q9UQ35 2752 aaKnown RBP8.65□□□□□ -1.02
CLSTN1-201ENST00000361311 C20orf166-AS1Q96NR2 134 aa8.63□□□□□ -1.03
CLSTN1-201ENST00000361311 KRTAP1-4P0C5Y4 121 aa8.61□□□□□ -1.03
CLSTN1-201ENST00000361311 C10orf95Q9H7T3 257 aa8.59□□□□□ -1.03
CLSTN1-201ENST00000361311 BSNQ9UPA5 3926 aa8.56□□□□□ -1.04
CLSTN1-201ENST00000361311 CSMD2Q7Z408 3487 aa8.48□□□□□ -1.05
CLSTN1-201ENST00000361311 NBPF19A0A087WUL8 3843 aa8.46□□□□□ -1.05
CLSTN1-201ENST00000361311 M0R2T5 61 aa8.46□□□□□ -1.06
CLSTN1-201ENST00000361311 SEC61BP60468 96 aaKnown RBP8.42□□□□□ -1.06
CLSTN1-201ENST00000361311 FBN3Q75N90 2809 aa8.4□□□□□ -1.07
CLSTN1-201ENST00000361311 VPS13CQ709C8 3753 aa8.39□□□□□ -1.07
CLSTN1-201ENST00000361311 P0C880 135 aa8.33□□□□□ -1.08
CLSTN1-201ENST00000361311 TRRAPQ9Y4A5 3859 aa8.31□□□□□ -1.08
CLSTN1-201ENST00000361311 PLAC4Q8WY50 150 aa8.26□□□□□ -1.09
CLSTN1-201ENST00000361311 MEGF8Q7Z7M0 2845 aa8.22□□□□□ -1.09
CLSTN1-201ENST00000361311 ANK3Q12955 4377 aaKnown RBP8.21□□□□□ -1.1
CLSTN1-201ENST00000361311 KRTAP3-1Q9BYR8 98 aa8.21□□□□□ -1.1
CLSTN1-201ENST00000361311 TPRXLQ17RH7 258 aa8.2□□□□□ -1.1
CLSTN1-201ENST00000361311 XP32Q5T750 250 aa8.18□□□□□ -1.1
CLSTN1-201ENST00000361311 COL7A1Q02388 2944 aa8.16□□□□□ -1.1
CLSTN1-201ENST00000361311 KRTAP12-2P59991 146 aa8.1□□□□□ -1.11
CLSTN1-201ENST00000361311 KRTAP10-8P60410 259 aa8.07□□□□□ -1.12
CLSTN1-201ENST00000361311 PP632Q6XCG6 107 aa8.07□□□□□ -1.12
CLSTN1-201ENST00000361311 AKAP9Q99996 3911 aa8.06□□□□□ -1.12
CLSTN1-201ENST00000361311 TNP1P09430 55 aa8.02□□□□□ -1.12
CLSTN1-201ENST00000361311 KRTAP13-4Q3LI77 160 aa8.01□□□□□ -1.13
CLSTN1-201ENST00000361311 KRTAP10-6P60371 365 aaPredicted RBP7.99□□□□□ -1.13
CLSTN1-201ENST00000361311 KRTAP12-1P59990 96 aa7.99□□□□□ -1.13
CLSTN1-201ENST00000361311 CSMD3Q7Z407 3707 aa7.89□□□□□ -1.15
CLSTN1-201ENST00000361311 A0A1B0GVY2 172 aa7.89□□□□□ -1.15
CLSTN1-201ENST00000361311 ZNF469Q96JG9 3925 aaPredicted RBP7.88□□□□□ -1.15
CLSTN1-201ENST00000361311 KRTAP15-1Q3LI76 137 aa7.84□□□□□ -1.15
CLSTN1-201ENST00000361311 KRTAP3-2Q9BYR7 98 aa7.76□□□□□ -1.17
CLSTN1-201ENST00000361311 KRTAP3-3Q9BYR6 98 aa7.72□□□□□ -1.17
CLSTN1-201ENST00000361311 HUWE1Q7Z6Z7 4374 aaKnown RBP7.69□□□□□ -1.18
CLSTN1-201ENST00000361311 DNAH10Q8IVF4 4471 aa7.49□□□□□ -1.21
CLSTN1-201ENST00000361311 ALMS1Q8TCU4 4167 aa7.36□□□□□ -1.23
CLSTN1-201ENST00000361311 KRTAP10-4P60372 401 aaPredicted RBP7.35□□□□□ -1.23
CLSTN1-201ENST00000361311 DNHD1Q96M86 4753 aa7.35□□□□□ -1.23
CLSTN1-201ENST00000361311 KRTAP10-10P60014 251 aa7.34□□□□□ -1.23
CLSTN1-201ENST00000361311 PLECQ15149 4684 aaKnown RBP7.33□□□□□ -1.24
CLSTN1-201ENST00000361311 DNAH1Q9P2D7 4330 aa7.33□□□□□ -1.24
CLSTN1-201ENST00000361311 DNAH9Q9NYC9 4486 aa7.31□□□□□ -1.24
CLSTN1-201ENST00000361311 DNAH11Q96DT5 4516 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms