RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 DSPP15924 2871 aaKnown RBP9.72□□□□□ -0.85
BRPF3-202ENST00000357641 XIRP2A4UGR9 3374 aa9.71□□□□□ -0.86
BRPF3-202ENST00000357641 NBEAQ8NFP9 2946 aa9.68□□□□□ -0.86
BRPF3-202ENST00000357641 HIVEP1P15822 2718 aa9.64□□□□□ -0.87
BRPF3-202ENST00000357641 LRBAP50851 2863 aa9.64□□□□□ -0.87
BRPF3-202ENST00000357641 BRCA2P51587 3418 aa9.64□□□□□ -0.87
BRPF3-202ENST00000357641 DMXL2Q8TDJ6 3036 aa9.63□□□□□ -0.87
BRPF3-202ENST00000357641 ITPR2Q14571 2701 aa9.59□□□□□ -0.87
BRPF3-202ENST00000357641 IGSF10Q6WRI0 2623 aa9.59□□□□□ -0.87
BRPF3-202ENST00000357641 UTP20O75691 2785 aaKnown RBP9.58□□□□□ -0.88
BRPF3-202ENST00000357641 KRTAP10-10P60014 251 aa9.58□□□□□ -0.88
BRPF3-202ENST00000357641 DNAH14Q0VDD8 3507 aa9.54□□□□□ -0.88
BRPF3-202ENST00000357641 KRTAP13-4Q3LI77 160 aa9.52□□□□□ -0.88
BRPF3-202ENST00000357641 KRTAP12-1P59990 96 aa9.52□□□□□ -0.89
BRPF3-202ENST00000357641 REV3LO60673 3130 aa9.52□□□□□ -0.89
BRPF3-202ENST00000357641 PRO2289Q9P1D8 64 aa9.5□□□□□ -0.89
BRPF3-202ENST00000357641 TACC2O95359 2948 aa9.49□□□□□ -0.89
BRPF3-202ENST00000357641 KMT2BQ9UMN6 2715 aaPredicted RBP9.4□□□□□ -0.9
BRPF3-202ENST00000357641 VCANP13611 3396 aa9.4□□□□□ -0.9
BRPF3-202ENST00000357641 ATMQ13315 3056 aa9.39□□□□□ -0.91
BRPF3-202ENST00000357641 ADGRG4Q8IZF6 3080 aa9.39□□□□□ -0.91
BRPF3-202ENST00000357641 COL6A3P12111 3177 aa9.38□□□□□ -0.91
BRPF3-202ENST00000357641 CDH23Q9H251 3354 aa9.38□□□□□ -0.91
BRPF3-202ENST00000357641 CFAP47Q6ZTR5 3102 aa9.37□□□□□ -0.91
BRPF3-202ENST00000357641 ZZEF1O43149 2961 aa9.36□□□□□ -0.91
BRPF3-202ENST00000357641 TGP01266 2768 aa9.35□□□□□ -0.91
BRPF3-202ENST00000357641 COL12A1Q99715 3063 aa9.34□□□□□ -0.91
BRPF3-202ENST00000357641 KRTAP3-1Q9BYR8 98 aa9.3□□□□□ -0.92
BRPF3-202ENST00000357641 LAMA1P25391 3075 aa9.3□□□□□ -0.92
BRPF3-202ENST00000357641 CELSR2Q9HCU4 2923 aa9.27□□□□□ -0.93
BRPF3-202ENST00000357641 BOD1L1Q8NFC6 3051 aa9.27□□□□□ -0.93
BRPF3-202ENST00000357641 KRTAP15-1Q3LI76 137 aa9.27□□□□□ -0.93
BRPF3-202ENST00000357641 FRYLO94915 3013 aa9.26□□□□□ -0.93
BRPF3-202ENST00000357641 CRYBG3Q68DQ2 2970 aa9.21□□□□□ -0.93
BRPF3-202ENST00000357641 NIPBLQ6KC79 2804 aaeCLIP9.18□□□□□ -0.94
BRPF3-202ENST00000357641 SZT2Q5T011 3432 aa9.14□□□□□ -0.95
BRPF3-202ENST00000357641 KRTAP10-6P60371 365 aaPredicted RBP9.12□□□□□ -0.95
BRPF3-202ENST00000357641 DCHS2Q6V1P9 2916 aa9.12□□□□□ -0.95
BRPF3-202ENST00000357641 INE1O15225 51 aa9.11□□□□□ -0.95
BRPF3-202ENST00000357641 FLNCQ14315 2725 aa9.07□□□□□ -0.96
BRPF3-202ENST00000357641 TNRC18O15417 2968 aaPredicted RBP8.98□□□□□ -0.97
BRPF3-202ENST00000357641 TENM4Q6N022 2769 aa8.96□□□□□ -0.97
BRPF3-202ENST00000357641 SPEGQ15772 3267 aa8.95□□□□□ -0.98
BRPF3-202ENST00000357641 NF1P21359 2839 aa8.94□□□□□ -0.98
BRPF3-202ENST00000357641 ZANQ9Y493 2812 aa8.89□□□□□ -0.99
BRPF3-202ENST00000357641 HRNRQ86YZ3 2850 aaPredicted RBP8.88□□□□□ -0.99
BRPF3-202ENST00000357641 DMXL1Q9Y485 3027 aa8.88□□□□□ -0.99
BRPF3-202ENST00000357641 FBN2P35556 2912 aa8.86□□□□□ -0.99
BRPF3-202ENST00000357641 KRTAP21-3Q3LHN1 58 aa8.85□□□□□ -0.99
BRPF3-202ENST00000357641 EYSQ5T1H1 3165 aa8.84□□□□□ -1
BRPF3-202ENST00000357641 TENM1Q9UKZ4 2725 aa8.81□□□□□ -1
BRPF3-202ENST00000357641 TENM2Q9NT68 2774 aa8.81□□□□□ -1
BRPF3-202ENST00000357641 TENM3Q9P273 2699 aa8.81□□□□□ -1
BRPF3-202ENST00000357641 USP34Q70CQ2 3546 aa8.77□□□□□ -1.01
BRPF3-202ENST00000357641 CELSR1Q9NYQ6 3014 aa8.76□□□□□ -1.01
BRPF3-202ENST00000357641 KRTAP3-2Q9BYR7 98 aa8.74□□□□□ -1.01
BRPF3-202ENST00000357641 SPTBN5Q9NRC6 3674 aaKnown RBP8.66□□□□□ -1.02
BRPF3-202ENST00000357641 KRTAP3-3Q9BYR6 98 aa8.65□□□□□ -1.02
BRPF3-202ENST00000357641 PDZD2O15018 2839 aa8.64□□□□□ -1.03
BRPF3-202ENST00000357641 DCHS1Q96JQ0 3298 aa8.58□□□□□ -1.04
BRPF3-202ENST00000357641 CRCT1Q9UGL9 99 aa8.56□□□□□ -1.04
BRPF3-202ENST00000357641 MXRA5Q9NR99 2828 aa8.55□□□□□ -1.04
BRPF3-202ENST00000357641 WDFY3Q8IZQ1 3526 aa8.55□□□□□ -1.04
BRPF3-202ENST00000357641 KRTAP10-12P60413 245 aa8.52□□□□□ -1.05
BRPF3-202ENST00000357641 LOC400499M0QZD8 3231 aa8.51□□□□□ -1.05
BRPF3-202ENST00000357641 MYO15AQ9UKN7 3530 aa8.47□□□□□ -1.05
BRPF3-202ENST00000357641 CSMD1Q96PZ7 3565 aa8.43□□□□□ -1.06
BRPF3-202ENST00000357641 KRTAP12-3P60328 96 aa8.38□□□□□ -1.07
BRPF3-202ENST00000357641 VWFP04275 2813 aa8.37□□□□□ -1.07
BRPF3-202ENST00000357641 PKD1L1Q8TDX9 2849 aa8.36□□□□□ -1.07
BRPF3-202ENST00000357641 LCE3AQ5TA76 89 aa8.35□□□□□ -1.07
BRPF3-202ENST00000357641 ZFHX4Q86UP3 3567 aa8.34□□□□□ -1.07
BRPF3-202ENST00000357641 KRTAP23-1A1A580 65 aa8.29□□□□□ -1.08
BRPF3-202ENST00000357641 SRRM2Q9UQ35 2752 aaKnown RBP8.26□□□□□ -1.09
BRPF3-202ENST00000357641 ASPMQ8IZT6 3477 aa8.26□□□□□ -1.09
BRPF3-202ENST00000357641 RELNP78509 3460 aa8.25□□□□□ -1.09
BRPF3-202ENST00000357641 MEGF8Q7Z7M0 2845 aa8.2□□□□□ -1.1
BRPF3-202ENST00000357641 FBN3Q75N90 2809 aa8.16□□□□□ -1.1
BRPF3-202ENST00000357641 LORP23490 312 aaPredicted RBP8.15□□□□□ -1.1
BRPF3-202ENST00000357641 MT1HL1P0DM35 61 aa8.13□□□□□ -1.11
BRPF3-202ENST00000357641 KRTAP10-5P60370 271 aa8.09□□□□□ -1.11
BRPF3-202ENST00000357641 ZFHX3Q15911 3703 aa8.06□□□□□ -1.12
BRPF3-202ENST00000357641 LAMA5O15230 3695 aa8.04□□□□□ -1.12
BRPF3-202ENST00000357641 SMG1Q96Q15 3661 aaKnown RBP8.02□□□□□ -1.12
BRPF3-202ENST00000357641 NBPF19A0A087WUL8 3843 aa7.97□□□□□ -1.13
BRPF3-202ENST00000357641 ANK3Q12955 4377 aaKnown RBP7.91□□□□□ -1.14
BRPF3-202ENST00000357641 SVEP1Q4LDE5 3571 aa7.89□□□□□ -1.15
BRPF3-202ENST00000357641 FBN1P35555 2871 aaKnown RBP7.87□□□□□ -1.15
BRPF3-202ENST00000357641 KRTAP10-4P60372 401 aaPredicted RBP7.86□□□□□ -1.15
BRPF3-202ENST00000357641 COL7A1Q02388 2944 aa7.84□□□□□ -1.15
BRPF3-202ENST00000357641 CUBNO60494 3623 aa7.8□□□□□ -1.16
BRPF3-202ENST00000357641 DMDP11532 3685 aa7.75□□□□□ -1.17
BRPF3-202ENST00000357641 HUWE1Q7Z6Z7 4374 aaKnown RBP7.71□□□□□ -1.18
BRPF3-202ENST00000357641 KRTAP4-5Q9BYR2 181 aa7.68□□□□□ -1.18
BRPF3-202ENST00000357641 OTOGQ6ZRI0 2925 aa7.66□□□□□ -1.18
BRPF3-202ENST00000357641 SPENQ96T58 3664 aaKnown RBP7.65□□□□□ -1.19
BRPF3-202ENST00000357641 TRRAPQ9Y4A5 3859 aa7.61□□□□□ -1.19
BRPF3-202ENST00000357641 KRTAP8-1Q8IUC2 63 aa7.58□□□□□ -1.2
BRPF3-202ENST00000357641 MUC3AQ02505 3323 aa7.58□□□□□ -1.2
BRPF3-202ENST00000357641 CSMD2Q7Z408 3487 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms