RNA–Protein interactions for RNA: ENST00000356713.4

CNNM1-201, Transcript of cyclin and CBS domain divalent metal cation transport mediator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNNM1, Length 5,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM1-201ENST00000356713 PRO2289Q9P1D8 64 aa10.42□□□□□ -0.74
CNNM1-201ENST00000356713 DNAH14Q0VDD8 3507 aa10.39□□□□□ -0.75
CNNM1-201ENST00000356713 MAP1AP78559 2803 aaPredicted RBP10.38□□□□□ -0.75
CNNM1-201ENST00000356713 APCP25054 2843 aa10.31□□□□□ -0.76
CNNM1-201ENST00000356713 VPS13AQ96RL7 3174 aa10.28□□□□□ -0.76
CNNM1-201ENST00000356713 ITPR1Q14643 2758 aa10.27□□□□□ -0.77
CNNM1-201ENST00000356713 KRTAP13-3Q3SY46 172 aa10.27□□□□□ -0.77
CNNM1-201ENST00000356713 KMT2BQ9UMN6 2715 aaPredicted RBP10.27□□□□□ -0.77
CNNM1-201ENST00000356713 KALRNO60229 2985 aa10.26□□□□□ -0.77
CNNM1-201ENST00000356713 CRYBG3Q68DQ2 2970 aa10.26□□□□□ -0.77
CNNM1-201ENST00000356713 UTP20O75691 2785 aaKnown RBP10.22□□□□□ -0.77
CNNM1-201ENST00000356713 HIVEP1P15822 2718 aa10.21□□□□□ -0.78
CNNM1-201ENST00000356713 VCANP13611 3396 aa10.18□□□□□ -0.78
CNNM1-201ENST00000356713 TACC2O95359 2948 aa10.15□□□□□ -0.78
CNNM1-201ENST00000356713 SZT2Q5T011 3432 aa10.14□□□□□ -0.79
CNNM1-201ENST00000356713 DMXL2Q8TDJ6 3036 aa10.11□□□□□ -0.79
CNNM1-201ENST00000356713 REV3LO60673 3130 aa10.1□□□□□ -0.79
CNNM1-201ENST00000356713 COL6A3P12111 3177 aa10.09□□□□□ -0.79
CNNM1-201ENST00000356713 ASH1LQ9NR48 2969 aaKnown RBP10.09□□□□□ -0.79
CNNM1-201ENST00000356713 LRBAP50851 2863 aa10.08□□□□□ -0.8
CNNM1-201ENST00000356713 LAMA1P25391 3075 aa10.06□□□□□ -0.8
CNNM1-201ENST00000356713 ATMQ13315 3056 aa10.03□□□□□ -0.8
CNNM1-201ENST00000356713 KRTAP12-2P59991 146 aa9.99□□□□□ -0.81
CNNM1-201ENST00000356713 TENM4Q6N022 2769 aa9.97□□□□□ -0.81
CNNM1-201ENST00000356713 COL12A1Q99715 3063 aa9.96□□□□□ -0.82
CNNM1-201ENST00000356713 CFAP47Q6ZTR5 3102 aa9.95□□□□□ -0.82
CNNM1-201ENST00000356713 NBEAQ8NFP9 2946 aa9.87□□□□□ -0.83
CNNM1-201ENST00000356713 BOD1L1Q8NFC6 3051 aa9.86□□□□□ -0.83
CNNM1-201ENST00000356713 FRYLO94915 3013 aa9.79□□□□□ -0.84
CNNM1-201ENST00000356713 ADGRG4Q8IZF6 3080 aa9.79□□□□□ -0.84
CNNM1-201ENST00000356713 SPTBN5Q9NRC6 3674 aaKnown RBP9.79□□□□□ -0.84
CNNM1-201ENST00000356713 KRTAP13-4Q3LI77 160 aa9.78□□□□□ -0.84
CNNM1-201ENST00000356713 CELSR2Q9HCU4 2923 aa9.78□□□□□ -0.84
CNNM1-201ENST00000356713 FLNCQ14315 2725 aa9.78□□□□□ -0.84
CNNM1-201ENST00000356713 SPEGQ15772 3267 aa9.73□□□□□ -0.85
CNNM1-201ENST00000356713 EYSQ5T1H1 3165 aa9.71□□□□□ -0.85
CNNM1-201ENST00000356713 ZZEF1O43149 2961 aa9.69□□□□□ -0.86
CNNM1-201ENST00000356713 KRTAP12-1P59990 96 aa9.69□□□□□ -0.86
CNNM1-201ENST00000356713 NIPBLQ6KC79 2804 aaeCLIP9.67□□□□□ -0.86
CNNM1-201ENST00000356713 DCHS2Q6V1P9 2916 aa9.67□□□□□ -0.86
CNNM1-201ENST00000356713 KRTAP15-1Q3LI76 137 aa9.65□□□□□ -0.87
CNNM1-201ENST00000356713 USP34Q70CQ2 3546 aa9.64□□□□□ -0.87
CNNM1-201ENST00000356713 TENM2Q9NT68 2774 aa9.64□□□□□ -0.87
CNNM1-201ENST00000356713 TENM1Q9UKZ4 2725 aa9.59□□□□□ -0.87
CNNM1-201ENST00000356713 TGP01266 2768 aa9.55□□□□□ -0.88
CNNM1-201ENST00000356713 KRTAP3-1Q9BYR8 98 aa9.5□□□□□ -0.89
CNNM1-201ENST00000356713 MYO15AQ9UKN7 3530 aa9.5□□□□□ -0.89
CNNM1-201ENST00000356713 TENM3Q9P273 2699 aa9.41□□□□□ -0.9
CNNM1-201ENST00000356713 TNRC18O15417 2968 aaPredicted RBP9.39□□□□□ -0.91
CNNM1-201ENST00000356713 NF1P21359 2839 aa9.37□□□□□ -0.91
CNNM1-201ENST00000356713 CRCT1Q9UGL9 99 aa9.36□□□□□ -0.91
CNNM1-201ENST00000356713 ZANQ9Y493 2812 aa9.35□□□□□ -0.91
CNNM1-201ENST00000356713 HRNRQ86YZ3 2850 aaPredicted RBP9.34□□□□□ -0.91
CNNM1-201ENST00000356713 CELSR1Q9NYQ6 3014 aa9.33□□□□□ -0.92
CNNM1-201ENST00000356713 LOC400499M0QZD8 3231 aa9.29□□□□□ -0.92
CNNM1-201ENST00000356713 FBN2P35556 2912 aa9.27□□□□□ -0.93
CNNM1-201ENST00000356713 DMXL1Q9Y485 3027 aa9.25□□□□□ -0.93
CNNM1-201ENST00000356713 WDFY3Q8IZQ1 3526 aa9.23□□□□□ -0.93
CNNM1-201ENST00000356713 KRTAP10-6P60371 365 aaPredicted RBP9.22□□□□□ -0.93
CNNM1-201ENST00000356713 ASPMQ8IZT6 3477 aa9.16□□□□□ -0.94
CNNM1-201ENST00000356713 DCHS1Q96JQ0 3298 aa9.14□□□□□ -0.95
CNNM1-201ENST00000356713 PKD1L1Q8TDX9 2849 aa9.11□□□□□ -0.95
CNNM1-201ENST00000356713 ZFHX4Q86UP3 3567 aa9.1□□□□□ -0.95
CNNM1-201ENST00000356713 KRTAP10-12P60413 245 aa9.08□□□□□ -0.96
CNNM1-201ENST00000356713 VWFP04275 2813 aa9.07□□□□□ -0.96
CNNM1-201ENST00000356713 PDZD2O15018 2839 aa9.06□□□□□ -0.96
CNNM1-201ENST00000356713 RELNP78509 3460 aa9.05□□□□□ -0.96
CNNM1-201ENST00000356713 CSMD1Q96PZ7 3565 aa9□□□□□ -0.97
CNNM1-201ENST00000356713 NBPF19A0A087WUL8 3843 aa8.98□□□□□ -0.97
CNNM1-201ENST00000356713 MT1HL1P0DM35 61 aa8.96□□□□□ -0.98
CNNM1-201ENST00000356713 INE1O15225 51 aa8.92□□□□□ -0.98
CNNM1-201ENST00000356713 MXRA5Q9NR99 2828 aa8.92□□□□□ -0.98
CNNM1-201ENST00000356713 KRTAP3-2Q9BYR7 98 aa8.84□□□□□ -0.99
CNNM1-201ENST00000356713 KRTAP3-3Q9BYR6 98 aa8.84□□□□□ -0.99
CNNM1-201ENST00000356713 LAMA5O15230 3695 aa8.81□□□□□ -1
CNNM1-201ENST00000356713 KRTAP4-5Q9BYR2 181 aa8.81□□□□□ -1
CNNM1-201ENST00000356713 KRTAP12-3P60328 96 aa8.78□□□□□ -1
CNNM1-201ENST00000356713 SMG1Q96Q15 3661 aaKnown RBP8.75□□□□□ -1.01
CNNM1-201ENST00000356713 LCE3AQ5TA76 89 aa8.73□□□□□ -1.01
CNNM1-201ENST00000356713 ANK3Q12955 4377 aaKnown RBP8.71□□□□□ -1.02
CNNM1-201ENST00000356713 DMDP11532 3685 aa8.64□□□□□ -1.03
CNNM1-201ENST00000356713 SVEP1Q4LDE5 3571 aa8.6□□□□□ -1.03
CNNM1-201ENST00000356713 KRTAP10-5P60370 271 aa8.53□□□□□ -1.04
CNNM1-201ENST00000356713 MEGF8Q7Z7M0 2845 aa8.53□□□□□ -1.04
CNNM1-201ENST00000356713 KRTAP10-4P60372 401 aaPredicted RBP8.52□□□□□ -1.05
CNNM1-201ENST00000356713 FBN3Q75N90 2809 aa8.52□□□□□ -1.05
CNNM1-201ENST00000356713 LORP23490 312 aaPredicted RBP8.51□□□□□ -1.05
CNNM1-201ENST00000356713 ZFHX3Q15911 3703 aa8.49□□□□□ -1.05
CNNM1-201ENST00000356713 SRRM2Q9UQ35 2752 aaKnown RBP8.47□□□□□ -1.05
CNNM1-201ENST00000356713 KRTAP8-1Q8IUC2 63 aa8.46□□□□□ -1.05
CNNM1-201ENST00000356713 FBN1P35555 2871 aaKnown RBP8.43□□□□□ -1.06
CNNM1-201ENST00000356713 HUWE1Q7Z6Z7 4374 aaKnown RBP8.42□□□□□ -1.06
CNNM1-201ENST00000356713 CUBNO60494 3623 aa8.4□□□□□ -1.07
CNNM1-201ENST00000356713 ALMS1Q8TCU4 4167 aa8.38□□□□□ -1.07
CNNM1-201ENST00000356713 KRTAP23-1A1A580 65 aa8.38□□□□□ -1.07
CNNM1-201ENST00000356713 SPENQ96T58 3664 aaKnown RBP8.38□□□□□ -1.07
CNNM1-201ENST00000356713 OTOGQ6ZRI0 2925 aa8.35□□□□□ -1.07
CNNM1-201ENST00000356713 COL7A1Q02388 2944 aa8.3□□□□□ -1.08
CNNM1-201ENST00000356713 CSMD2Q7Z408 3487 aa8.29□□□□□ -1.08
CNNM1-201ENST00000356713 TRRAPQ9Y4A5 3859 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms