RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 LINC00336Q6ZUF6 198 aa10.69□□□□□ -0.7
APP-203ENST00000354192 DNAH5Q8TE73 4624 aa10.66□□□□□ -0.7
APP-203ENST00000354192 MRPL34Q9BQ48 92 aaKnown RBP10.65□□□□□ -0.7
APP-203ENST00000354192 PLA2G1BP04054 148 aaKnown RBP10.63□□□□□ -0.71
APP-203ENST00000354192 KRTAP13-2Q52LG2 175 aa10.6□□□□□ -0.71
APP-203ENST00000354192 SVIPQ8NHG7 77 aa10.6□□□□□ -0.71
APP-203ENST00000354192 C4orf48Q5BLP8 95 aa10.59□□□□□ -0.71
APP-203ENST00000354192 PKHD1P08F94 4074 aa10.59□□□□□ -0.71
APP-203ENST00000354192 CD164Q04900 197 aa10.57□□□□□ -0.72
APP-203ENST00000354192 Q5W150 140 aa10.56□□□□□ -0.72
APP-203ENST00000354192 SSBP3-AS1Q7Z2R9 100 aa10.55□□□□□ -0.72
APP-203ENST00000354192 TP53AIP1Q9HCN2 124 aa10.54□□□□□ -0.72
APP-203ENST00000354192 TYMSOSQ8TAI1 123 aa10.53□□□□□ -0.72
APP-203ENST00000354192 LINC00313P59037 77 aa10.53□□□□□ -0.72
APP-203ENST00000354192 KMT2CQ8NEZ4 4911 aaKnown RBP10.53□□□□□ -0.72
APP-203ENST00000354192 A8MUN3 132 aa10.52□□□□□ -0.73
APP-203ENST00000354192 VPS13BQ7Z7G8 4022 aa10.52□□□□□ -0.73
APP-203ENST00000354192 ALMS1Q8TCU4 4167 aa10.52□□□□□ -0.73
APP-203ENST00000354192 PRR26Q8N8Z3 221 aa10.51□□□□□ -0.73
APP-203ENST00000354192 FLG2Q5D862 2391 aaPredicted RBP10.49□□□□□ -0.73
APP-203ENST00000354192 COA5Q86WW8 74 aa10.49□□□□□ -0.73
APP-203ENST00000354192 H3BPC8 53 aa10.49□□□□□ -0.73
APP-203ENST00000354192 C1orf195Q5TG92 126 aa10.49□□□□□ -0.73
APP-203ENST00000354192 SACSQ9NZJ4 4579 aa10.48□□□□□ -0.73
APP-203ENST00000354192 Q8N9P0 234 aaPredicted RBP10.48□□□□□ -0.73
APP-203ENST00000354192 CYP4F30PQ9H0H9 118 aa10.47□□□□□ -0.73
APP-203ENST00000354192 SPAG11AQ6PDA7 123 aa10.47□□□□□ -0.73
APP-203ENST00000354192 DMBT1Q9UGM3 2413 aaPredicted RBP10.47□□□□□ -0.73
APP-203ENST00000354192 Q6ZSA8 131 aa10.47□□□□□ -0.73
APP-203ENST00000354192 IGKV2D-30A0A075B6S6 120 aa10.46□□□□□ -0.74
APP-203ENST00000354192 IGKV2-30P06310 120 aa10.46□□□□□ -0.74
APP-203ENST00000354192 PRR15LQ9BU68 103 aa10.45□□□□□ -0.74
APP-203ENST00000354192 FAT2Q9NYQ8 4349 aa10.45□□□□□ -0.74
APP-203ENST00000354192 FAT1Q14517 4588 aa10.45□□□□□ -0.74
APP-203ENST00000354192 KRTAP1-4P0C5Y4 121 aa10.42□□□□□ -0.74
APP-203ENST00000354192 ASB16-AS1Q495Z4 193 aa10.4□□□□□ -0.74
APP-203ENST00000354192 IGLV7-46A0A075B6I9 117 aa10.39□□□□□ -0.75
APP-203ENST00000354192 CHKB-CPT1BH3BT56 60 aa10.39□□□□□ -0.75
APP-203ENST00000354192 SPANXA2-OT1Q8N9U9 137 aa10.39□□□□□ -0.75
APP-203ENST00000354192 PKD1P98161 4303 aa10.38□□□□□ -0.75
APP-203ENST00000354192 C9orf92A6NGG3 77 aa10.36□□□□□ -0.75
APP-203ENST00000354192 A8MU10 97 aa10.36□□□□□ -0.75
APP-203ENST00000354192 KRTAP21-3Q3LHN1 58 aa10.35□□□□□ -0.75
APP-203ENST00000354192 LIMD2Q9BT23 127 aa10.35□□□□□ -0.75
APP-203ENST00000354192 PRO0628Q9UI54 55 aa10.35□□□□□ -0.75
APP-203ENST00000354192 LOC101927531A0A1B0GV80 90 aa10.32□□□□□ -0.76
APP-203ENST00000354192 HRES1P13985 223 aa10.32□□□□□ -0.76
APP-203ENST00000354192 C8orf87E5RJ46 101 aa10.32□□□□□ -0.76
APP-203ENST00000354192 Q1T7F1 81 aa10.32□□□□□ -0.76
APP-203ENST00000354192 LINC00304Q8N9R0 145 aa10.32□□□□□ -0.76
APP-203ENST00000354192 SPTSSBQ8NFR3 76 aa10.28□□□□□ -0.76
APP-203ENST00000354192 DYNC1H1Q14204 4646 aaKnown RBP10.28□□□□□ -0.76
APP-203ENST00000354192 A6NED7 52 aa10.28□□□□□ -0.76
APP-203ENST00000354192 FAM229AH3BQW9 127 aa10.27□□□□□ -0.77
APP-203ENST00000354192 SPINK1P00995 79 aa10.26□□□□□ -0.77
APP-203ENST00000354192 Q5VV11 94 aa10.24□□□□□ -0.77
APP-203ENST00000354192 V9GYY9 64 aa10.23□□□□□ -0.77
APP-203ENST00000354192 Q8N1X5 172 aa10.19□□□□□ -0.78
APP-203ENST00000354192 ACYP2P14621 99 aa10.16□□□□□ -0.78
APP-203ENST00000354192 KRTAP13-3Q3SY46 172 aa10.16□□□□□ -0.78
APP-203ENST00000354192 C7orf65Q6ZTY9 151 aa10.16□□□□□ -0.78
APP-203ENST00000354192 RYR3Q15413 4870 aa10.16□□□□□ -0.78
APP-203ENST00000354192 RYR2Q92736 4967 aa10.16□□□□□ -0.78
APP-203ENST00000354192 KRTAP16-1A8MUX0 517 aa10.13□□□□□ -0.79
APP-203ENST00000354192 SPINK7P58062 85 aa10.06□□□□□ -0.8
APP-203ENST00000354192 PMAIP1Q13794 54 aa10.06□□□□□ -0.8
APP-203ENST00000354192 APOBP04114 4563 aaKnown RBP10.05□□□□□ -0.8
APP-203ENST00000354192 LRP1Q07954 4544 aaKnown RBP10.05□□□□□ -0.8
APP-203ENST00000354192 A0A1B0GVY2 172 aa10.04□□□□□ -0.8
APP-203ENST00000354192 LCA10Q71F78 164 aa10□□□□□ -0.81
APP-203ENST00000354192 DMAC1Q96GE9 116 aa10□□□□□ -0.81
APP-203ENST00000354192 MYCBP2O75592 4640 aa10□□□□□ -0.81
APP-203ENST00000354192 LINC01558Q9Y6Z2 57 aa10□□□□□ -0.81
APP-203ENST00000354192 A0A1B0GU69 56 aa9.97□□□□□ -0.81
APP-203ENST00000354192 Q75L30 129 aa9.96□□□□□ -0.81
APP-203ENST00000354192 Q5VSD8 79 aa9.93□□□□□ -0.82
APP-203ENST00000354192 KIAA1109Q2LD37 5005 aa9.92□□□□□ -0.82
APP-203ENST00000354192 KRTAP10-4P60372 401 aaPredicted RBP9.9□□□□□ -0.82
APP-203ENST00000354192 EPPK1P58107 5090 aaKnown RBP9.86□□□□□ -0.83
APP-203ENST00000354192 CDC42SE1Q9NRR8 79 aa9.81□□□□□ -0.84
APP-203ENST00000354192 RPS29P62273 56 aaKnown RBP9.76□□□□□ -0.85
APP-203ENST00000354192 FAT3Q8TDW7 4589 aa9.76□□□□□ -0.85
APP-203ENST00000354192 HSPG2P98160 4391 aa9.75□□□□□ -0.85
APP-203ENST00000354192 SEC61GP60059 68 aa9.75□□□□□ -0.85
APP-203ENST00000354192 ATP11AUNQ6ZP68 121 aa9.74□□□□□ -0.85
APP-203ENST00000354192 A8MUU9 505 aa9.73□□□□□ -0.85
APP-203ENST00000354192 C20orf166-AS1Q96NR2 134 aa9.72□□□□□ -0.85
APP-203ENST00000354192 PKHD1L1Q86WI1 4243 aa9.71□□□□□ -0.86
APP-203ENST00000354192 KRTAP17-1Q9BYP8 105 aa9.7□□□□□ -0.86
APP-203ENST00000354192 MIR22HGQ0VDD5 57 aa9.67□□□□□ -0.86
APP-203ENST00000354192 UQCR11O14957 56 aa9.66□□□□□ -0.86
APP-203ENST00000354192 KRTAP3-1Q9BYR8 98 aa9.63□□□□□ -0.87
APP-203ENST00000354192 RYR1P21817 5038 aa9.62□□□□□ -0.87
APP-203ENST00000354192 KRTAP10-8P60410 259 aa9.59□□□□□ -0.87
APP-203ENST00000354192 A6NN06 94 aa9.55□□□□□ -0.88
APP-203ENST00000354192 PRAC1Q96KF2 57 aa9.55□□□□□ -0.88
APP-203ENST00000354192 KTN1-AS1Q86SY8 53 aa9.53□□□□□ -0.88
APP-203ENST00000354192 ADM2Q7Z4H4 148 aa9.52□□□□□ -0.89
APP-203ENST00000354192 XP32Q5T750 250 aa9.51□□□□□ -0.89
APP-203ENST00000354192 SPATA8Q6RVD6 105 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms