RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 TYMSOSQ8TAI1 123 aa3.07□□□□□ -1.92
SKP1-202ENST00000353411 DMDP11532 3685 aa3.06□□□□□ -1.92
SKP1-202ENST00000353411 H1FX-AS1Q4G0G2 97 aa3.06□□□□□ -1.92
SKP1-202ENST00000353411 LOC400499M0QZD8 3231 aa3.06□□□□□ -1.92
SKP1-202ENST00000353411 KRTAP4-16G5E9R7 235 aaPredicted RBP3.06□□□□□ -1.92
SKP1-202ENST00000353411 LINC00483Q53H64 154 aa3.05□□□□□ -1.92
SKP1-202ENST00000353411 PLAC8Q9NZF1 115 aa3.04□□□□□ -1.92
SKP1-202ENST00000353411 SMG1Q96Q15 3661 aaKnown RBP3.04□□□□□ -1.92
SKP1-202ENST00000353411 NBDYA0A0U1RRE5 68 aa3.04□□□□□ -1.92
SKP1-202ENST00000353411 A8MUU9 505 aa3.03□□□□□ -1.92
SKP1-202ENST00000353411 COX6B2Q6YFQ2 88 aa3.03□□□□□ -1.92
SKP1-202ENST00000353411 C20orf166-AS1Q96NR2 134 aa3.03□□□□□ -1.92
SKP1-202ENST00000353411 PANO1I0J062 215 aa3.03□□□□□ -1.93
SKP1-202ENST00000353411 PSORS1C2Q9UIG4 136 aa3.02□□□□□ -1.93
SKP1-202ENST00000353411 KRTAP23-1A1A580 65 aa3.01□□□□□ -1.93
SKP1-202ENST00000353411 CSMD1Q96PZ7 3565 aa3.01□□□□□ -1.93
SKP1-202ENST00000353411 VWFP04275 2813 aa3.01□□□□□ -1.93
SKP1-202ENST00000353411 TENM3Q9P273 2699 aa3.01□□□□□ -1.93
SKP1-202ENST00000353411 FBN2P35556 2912 aa3□□□□□ -1.93
SKP1-202ENST00000353411 PKD1L1Q8TDX9 2849 aa3□□□□□ -1.93
SKP1-202ENST00000353411 ZANQ9Y493 2812 aa3□□□□□ -1.93
SKP1-202ENST00000353411 KRTAP1-3Q8IUG1 177 aa3□□□□□ -1.93
SKP1-202ENST00000353411 COL7A1Q02388 2944 aa3□□□□□ -1.93
SKP1-202ENST00000353411 CASC10Q5T4H9 136 aa3□□□□□ -1.93
SKP1-202ENST00000353411 ANAPC11Q9NYG5 84 aa3□□□□□ -1.93
SKP1-202ENST00000353411 K7EIL1 84 aa2.99□□□□□ -1.93
SKP1-202ENST00000353411 KRTAP1-1Q07627 177 aa2.99□□□□□ -1.93
SKP1-202ENST00000353411 LINC00304Q8N9R0 145 aa2.99□□□□□ -1.93
SKP1-202ENST00000353411 ZFHX4Q86UP3 3567 aa2.99□□□□□ -1.93
SKP1-202ENST00000353411 KRTAP11-1Q8IUC1 163 aa2.99□□□□□ -1.93
SKP1-202ENST00000353411 TENM2Q9NT68 2774 aa2.97□□□□□ -1.93
SKP1-202ENST00000353411 DCHS1Q96JQ0 3298 aa2.97□□□□□ -1.93
SKP1-202ENST00000353411 MXRA5Q9NR99 2828 aa2.96□□□□□ -1.93
SKP1-202ENST00000353411 C9orf92A6NGG3 77 aa2.94□□□□□ -1.94
SKP1-202ENST00000353411 A0A087WTM6 91 aa2.94□□□□□ -1.94
SKP1-202ENST00000353411 VPS13CQ709C8 3753 aa2.93□□□□□ -1.94
SKP1-202ENST00000353411 KRTAP10-11P60412 298 aa2.93□□□□□ -1.94
SKP1-202ENST00000353411 S4R3F8 94 aa2.93□□□□□ -1.94
SKP1-202ENST00000353411 AKAP9Q99996 3911 aa2.93□□□□□ -1.94
SKP1-202ENST00000353411 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.92□□□□□ -1.94
SKP1-202ENST00000353411 SRRM2Q9UQ35 2752 aaKnown RBP2.9□□□□□ -1.94
SKP1-202ENST00000353411 CUBNO60494 3623 aa2.9□□□□□ -1.95
SKP1-202ENST00000353411 CSMD2Q7Z408 3487 aa2.89□□□□□ -1.95
SKP1-202ENST00000353411 PLAC4Q8WY50 150 aa2.89□□□□□ -1.95
SKP1-202ENST00000353411 Q6ZSA8 131 aa2.88□□□□□ -1.95
SKP1-202ENST00000353411 KRTAP10-3P60369 221 aa2.88□□□□□ -1.95
SKP1-202ENST00000353411 MUC3AQ02505 3323 aa2.87□□□□□ -1.95
SKP1-202ENST00000353411 H0YAA0 97 aa2.87□□□□□ -1.95
SKP1-202ENST00000353411 MEGF8Q7Z7M0 2845 aa2.86□□□□□ -1.95
SKP1-202ENST00000353411 TENM4Q6N022 2769 aa2.86□□□□□ -1.95
SKP1-202ENST00000353411 R4GN34 69 aa2.85□□□□□ -1.95
SKP1-202ENST00000353411 HRNRQ86YZ3 2850 aaPredicted RBP2.85□□□□□ -1.95
SKP1-202ENST00000353411 M0QZ58 72 aa2.85□□□□□ -1.95
SKP1-202ENST00000353411 KRTAP7-1Q8IUC3 87 aa2.84□□□□□ -1.96
SKP1-202ENST00000353411 KRTAP3-3Q9BYR6 98 aa2.84□□□□□ -1.96
SKP1-202ENST00000353411 KRTAP3-2Q9BYR7 98 aa2.84□□□□□ -1.96
SKP1-202ENST00000353411 P0C880 135 aa2.83□□□□□ -1.96
SKP1-202ENST00000353411 KRTAP13-1Q8IUC0 172 aa2.82□□□□□ -1.96
SKP1-202ENST00000353411 M0R2T5 61 aa2.82□□□□□ -1.96
SKP1-202ENST00000353411 SVEP1Q4LDE5 3571 aa2.82□□□□□ -1.96
SKP1-202ENST00000353411 PP632Q6XCG6 107 aa2.82□□□□□ -1.96
SKP1-202ENST00000353411 RPS29P62273 56 aaKnown RBP2.8□□□□□ -1.96
SKP1-202ENST00000353411 FBN1P35555 2871 aaKnown RBP2.79□□□□□ -1.96
SKP1-202ENST00000353411 BSNQ9UPA5 3926 aa2.79□□□□□ -1.96
SKP1-202ENST00000353411 C10orf95Q9H7T3 257 aa2.78□□□□□ -1.96
SKP1-202ENST00000353411 KRTAP1-5Q9BYS1 174 aa2.78□□□□□ -1.97
SKP1-202ENST00000353411 TRRAPQ9Y4A5 3859 aa2.77□□□□□ -1.97
SKP1-202ENST00000353411 Q5VSD8 79 aa2.76□□□□□ -1.97
SKP1-202ENST00000353411 KRTAP13-3Q3SY46 172 aa2.75□□□□□ -1.97
SKP1-202ENST00000353411 SMR3BP02814 79 aaPredicted RBP2.74□□□□□ -1.97
SKP1-202ENST00000353411 OTOGQ6ZRI0 2925 aa2.72□□□□□ -1.97
SKP1-202ENST00000353411 CSMD3Q7Z407 3707 aa2.7□□□□□ -1.98
SKP1-202ENST00000353411 KRTAP15-1Q3LI76 137 aa2.7□□□□□ -1.98
SKP1-202ENST00000353411 LYSTQ99698 3801 aa2.69□□□□□ -1.98
SKP1-202ENST00000353411 Q6ZRN7 208 aaPredicted RBP2.68□□□□□ -1.98
SKP1-202ENST00000353411 KRTAP13-2Q52LG2 175 aa2.68□□□□□ -1.98
SKP1-202ENST00000353411 TNP1P09430 55 aa2.68□□□□□ -1.98
SKP1-202ENST00000353411 TPRXLQ17RH7 258 aa2.68□□□□□ -1.98
SKP1-202ENST00000353411 ZNF469Q96JG9 3925 aaPredicted RBP2.67□□□□□ -1.98
SKP1-202ENST00000353411 KRTAP10-8P60410 259 aa2.63□□□□□ -1.99
SKP1-202ENST00000353411 INE1O15225 51 aa2.61□□□□□ -1.99
SKP1-202ENST00000353411 KRTAP10-1P60331 282 aa2.61□□□□□ -1.99
SKP1-202ENST00000353411 KRTAP10-2P60368 255 aa2.59□□□□□ -1.99
SKP1-202ENST00000353411 KRTAP12-2P59991 146 aa2.59□□□□□ -1.99
SKP1-202ENST00000353411 PRO2289Q9P1D8 64 aa2.58□□□□□ -2
SKP1-202ENST00000353411 FBN3Q75N90 2809 aa2.56□□□□□ -2
SKP1-202ENST00000353411 KRTAP12-1P59990 96 aa2.56□□□□□ -2
SKP1-202ENST00000353411 KRTAP13-4Q3LI77 160 aa2.55□□□□□ -2
SKP1-202ENST00000353411 XP32Q5T750 250 aa2.54□□□□□ -2
SKP1-202ENST00000353411 KRTAP1-4P0C5Y4 121 aa2.54□□□□□ -2
SKP1-202ENST00000353411 ANK2Q01484 3957 aa2.5□□□□□ -2.01
SKP1-202ENST00000353411 A0A1B0GVY2 172 aa2.5□□□□□ -2.01
SKP1-202ENST00000353411 KRTAP10-6P60371 365 aaPredicted RBP2.49□□□□□ -2.01
SKP1-202ENST00000353411 KRTAP3-1Q9BYR8 98 aa2.49□□□□□ -2.01
SKP1-202ENST00000353411 ALMS1Q8TCU4 4167 aa2.48□□□□□ -2.01
SKP1-202ENST00000353411 LCE2DQ5TA82 110 aaPredicted RBP2.47□□□□□ -2.01
SKP1-202ENST00000353411 CMYA5Q8N3K9 4069 aa2.44□□□□□ -2.02
SKP1-202ENST00000353411 DNAH7Q8WXX0 4024 aa2.43□□□□□ -2.02
SKP1-202ENST00000353411 LCE2CQ5TA81 110 aa2.41□□□□□ -2.02
SKP1-202ENST00000353411 HECTD4Q9Y4D8 3996 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms