RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 CDC42SE1Q9NRR8 79 aa10.66□□□□□ -0.7
VHL-202ENST00000345392 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.66□□□□□ -0.7
VHL-202ENST00000345392 NBDYA0A0U1RRE5 68 aa10.64□□□□□ -0.71
VHL-202ENST00000345392 A6NN06 94 aa10.64□□□□□ -0.71
VHL-202ENST00000345392 CDK2AP2O75956 126 aa10.64□□□□□ -0.71
VHL-202ENST00000345392 SPINK7P58062 85 aa10.64□□□□□ -0.71
VHL-202ENST00000345392 MRPL34Q9BQ48 92 aaKnown RBP10.64□□□□□ -0.71
VHL-202ENST00000345392 PLAC8Q9NZF1 115 aa10.64□□□□□ -0.71
VHL-202ENST00000345392 KMT2AQ03164 3969 aa10.61□□□□□ -0.71
VHL-202ENST00000345392 HECTD4Q9Y4D8 3996 aa10.6□□□□□ -0.71
VHL-202ENST00000345392 Q6ZRN7 208 aaPredicted RBP10.6□□□□□ -0.71
VHL-202ENST00000345392 WWC2-AS2Q96NR7 200 aa10.6□□□□□ -0.71
VHL-202ENST00000345392 LINC00483Q53H64 154 aa10.59□□□□□ -0.71
VHL-202ENST00000345392 RBM12B-AS1Q9P1G2 102 aa10.59□□□□□ -0.71
VHL-202ENST00000345392 PRR26Q8N8Z3 221 aa10.58□□□□□ -0.72
VHL-202ENST00000345392 SPACA4Q8TDM5 124 aa10.58□□□□□ -0.72
VHL-202ENST00000345392 SPINK6Q6UWN8 80 aa10.57□□□□□ -0.72
VHL-202ENST00000345392 Q5W150 140 aa10.56□□□□□ -0.72
VHL-202ENST00000345392 DNAH8Q96JB1 4490 aa10.55□□□□□ -0.72
VHL-202ENST00000345392 DNAH2Q9P225 4427 aa10.55□□□□□ -0.72
VHL-202ENST00000345392 PSORS1C2Q9UIG4 136 aa10.54□□□□□ -0.72
VHL-202ENST00000345392 VPS13DQ5THJ4 4388 aa10.53□□□□□ -0.72
VHL-202ENST00000345392 ZNF706Q9Y5V0 76 aaPredicted RBP10.5□□□□□ -0.73
VHL-202ENST00000345392 DNAH17Q9UFH2 4485 aa10.48□□□□□ -0.73
VHL-202ENST00000345392 IGLV5-52A0A0A0MRZ9 124 aa10.48□□□□□ -0.73
VHL-202ENST00000345392 A0A087WTM6 91 aa10.47□□□□□ -0.73
VHL-202ENST00000345392 NUPR2A6NF83 97 aa10.46□□□□□ -0.73
VHL-202ENST00000345392 C7orf65Q6ZTY9 151 aa10.46□□□□□ -0.73
VHL-202ENST00000345392 ZNF861PO60384 105 aa10.45□□□□□ -0.74
VHL-202ENST00000345392 KRTAP13-3Q3SY46 172 aa10.45□□□□□ -0.74
VHL-202ENST00000345392 RTL8CO15255 209 aa10.44□□□□□ -0.74
VHL-202ENST00000345392 CIRBP-AS1Q8TBR5 109 aa10.42□□□□□ -0.74
VHL-202ENST00000345392 RETNLBQ9BQ08 111 aa10.41□□□□□ -0.74
VHL-202ENST00000345392 ACYP2P14621 99 aa10.4□□□□□ -0.74
VHL-202ENST00000345392 ALMS1Q8TCU4 4167 aa10.39□□□□□ -0.75
VHL-202ENST00000345392 DNAH6Q9C0G6 4158 aa10.39□□□□□ -0.75
VHL-202ENST00000345392 DMAC1Q96GE9 116 aa10.31□□□□□ -0.76
VHL-202ENST00000345392 LINC00313P59037 77 aa10.3□□□□□ -0.76
VHL-202ENST00000345392 PRAC1Q96KF2 57 aa10.3□□□□□ -0.76
VHL-202ENST00000345392 DNAH11Q96DT5 4516 aa10.29□□□□□ -0.76
VHL-202ENST00000345392 IGLV7-43P04211 117 aa10.28□□□□□ -0.76
VHL-202ENST00000345392 A0A1B0GU69 56 aa10.27□□□□□ -0.77
VHL-202ENST00000345392 ADM2Q7Z4H4 148 aa10.27□□□□□ -0.77
VHL-202ENST00000345392 C8orf87E5RJ46 101 aa10.25□□□□□ -0.77
VHL-202ENST00000345392 DNAH5Q8TE73 4624 aa10.25□□□□□ -0.77
VHL-202ENST00000345392 FAM229AH3BQW9 127 aa10.22□□□□□ -0.77
VHL-202ENST00000345392 LY6G6CO95867 125 aa10.21□□□□□ -0.78
VHL-202ENST00000345392 C1orf134Q5TEV5 83 aa10.2□□□□□ -0.78
VHL-202ENST00000345392 IGKV2-30P06310 120 aa10.2□□□□□ -0.78
VHL-202ENST00000345392 SSBP3-AS1Q7Z2R9 100 aa10.19□□□□□ -0.78
VHL-202ENST00000345392 KRTAP10-2P60368 255 aa10.16□□□□□ -0.78
VHL-202ENST00000345392 SPATA8Q6RVD6 105 aa10.16□□□□□ -0.78
VHL-202ENST00000345392 LRP1BQ9NZR2 4599 aa10.16□□□□□ -0.78
VHL-202ENST00000345392 IGKV2D-30A0A075B6S6 120 aa10.14□□□□□ -0.79
VHL-202ENST00000345392 MIR22HGQ0VDD5 57 aa10.13□□□□□ -0.79
VHL-202ENST00000345392 PLA2G1BP04054 148 aaKnown RBP10.12□□□□□ -0.79
VHL-202ENST00000345392 HYDINQ4G0P3 5121 aa10.12□□□□□ -0.79
VHL-202ENST00000345392 KRTAP13-2Q52LG2 175 aa10.11□□□□□ -0.79
VHL-202ENST00000345392 UQCR11O14957 56 aa10.1□□□□□ -0.79
VHL-202ENST00000345392 KRTAP16-1A8MUX0 517 aa10.09□□□□□ -0.79
VHL-202ENST00000345392 KMT2CQ8NEZ4 4911 aaKnown RBP10.03□□□□□ -0.8
VHL-202ENST00000345392 PKD1P98161 4303 aa10.03□□□□□ -0.8
VHL-202ENST00000345392 VPS13BQ7Z7G8 4022 aa10.02□□□□□ -0.81
VHL-202ENST00000345392 SPINK1P00995 79 aa10.01□□□□□ -0.81
VHL-202ENST00000345392 SACSQ9NZJ4 4579 aa10.01□□□□□ -0.81
VHL-202ENST00000345392 KRTAP10-1P60331 282 aa10□□□□□ -0.81
VHL-202ENST00000345392 FAT2Q9NYQ8 4349 aa9.99□□□□□ -0.81
VHL-202ENST00000345392 LINC01554Q52M75 96 aa9.98□□□□□ -0.81
VHL-202ENST00000345392 Q8N1X5 172 aa9.95□□□□□ -0.82
VHL-202ENST00000345392 CSAG1Q6PB30 78 aa9.91□□□□□ -0.82
VHL-202ENST00000345392 KRTAP1-4P0C5Y4 121 aa9.89□□□□□ -0.83
VHL-202ENST00000345392 PKHD1P08F94 4074 aa9.88□□□□□ -0.83
VHL-202ENST00000345392 Q6ZSA8 131 aa9.85□□□□□ -0.83
VHL-202ENST00000345392 C4orf48Q5BLP8 95 aa9.85□□□□□ -0.83
VHL-202ENST00000345392 RYR2Q92736 4967 aa9.84□□□□□ -0.83
VHL-202ENST00000345392 RYR3Q15413 4870 aa9.83□□□□□ -0.84
VHL-202ENST00000345392 TYMSOSQ8TAI1 123 aa9.8□□□□□ -0.84
VHL-202ENST00000345392 H0YAA0 97 aa9.74□□□□□ -0.85
VHL-202ENST00000345392 FAT1Q14517 4588 aa9.69□□□□□ -0.86
VHL-202ENST00000345392 SMR3BP02814 79 aaPredicted RBP9.69□□□□□ -0.86
VHL-202ENST00000345392 C9orf92A6NGG3 77 aa9.66□□□□□ -0.86
VHL-202ENST00000345392 A8MUU9 505 aa9.66□□□□□ -0.86
VHL-202ENST00000345392 DYNC1H1Q14204 4646 aaKnown RBP9.64□□□□□ -0.87
VHL-202ENST00000345392 LINC00304Q8N9R0 145 aa9.63□□□□□ -0.87
VHL-202ENST00000345392 KRTAP3-1Q9BYR8 98 aa9.63□□□□□ -0.87
VHL-202ENST00000345392 FLG2Q5D862 2391 aaPredicted RBP9.63□□□□□ -0.87
VHL-202ENST00000345392 A0A1B0GU33 70 aa9.62□□□□□ -0.87
VHL-202ENST00000345392 H3BS24 57 aa9.56□□□□□ -0.88
VHL-202ENST00000345392 H1FX-AS1Q4G0G2 97 aa9.56□□□□□ -0.88
VHL-202ENST00000345392 A0A1B0GVY2 172 aa9.55□□□□□ -0.88
VHL-202ENST00000345392 KRTAP25-1Q3LHN0 102 aa9.54□□□□□ -0.88
VHL-202ENST00000345392 CRIPTQ9P021 101 aa9.51□□□□□ -0.89
VHL-202ENST00000345392 EPPK1P58107 5090 aaKnown RBP9.51□□□□□ -0.89
VHL-202ENST00000345392 C20orf166-AS1Q96NR2 134 aa9.5□□□□□ -0.89
VHL-202ENST00000345392 APOBP04114 4563 aaKnown RBP9.48□□□□□ -0.89
VHL-202ENST00000345392 RPS29P62273 56 aaKnown RBP9.48□□□□□ -0.89
VHL-202ENST00000345392 PKHD1L1Q86WI1 4243 aa9.42□□□□□ -0.9
VHL-202ENST00000345392 COX6B2Q6YFQ2 88 aa9.41□□□□□ -0.9
VHL-202ENST00000345392 ROMO1P60602 79 aa9.38□□□□□ -0.91
VHL-202ENST00000345392 K7ERS5 55 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms